BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0166.0009.p
         (150 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309717|ref|YP_003773809.1| nitrate/sulfonate/bicarbonate A...   181   3e-47
gi|300311645|ref|YP_003775737.1| taurine ABC transporter ATPase ...   106   7e-25
gi|300312621|ref|YP_003776713.1| ABC transporter ATPase [Herbasp...    92   2e-20
gi|300311841|ref|YP_003775933.1| nitrate/sulfonate/bicarbonate A...    91   3e-20
gi|300309874|ref|YP_003773966.1| nitrate/sulfonate/bicarbonate A...    91   4e-20

>gi|300309717|ref|YP_003773809.1| nitrate/sulfonate/bicarbonate ABC
           transporter ATPase [Herbaspirillum seropedicae SmR1]
          Length = 269

 Score =  181 bits (458), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/98 (89%), Positives = 90/98 (91%)

Query: 37  STLLNAIAGFALPSSGNITTDGKPVTEPGPDRGMVFQEYALFPWMTVEQNVAFGLEIKGV 96
           STLLNAIAGFALPSSG I TD K V+EPGPDRGMVFQEYALFPWMTVEQNVAFGLEIKG 
Sbjct: 53  STLLNAIAGFALPSSGQILTDDKVVSEPGPDRGMVFQEYALFPWMTVEQNVAFGLEIKGT 112

Query: 97  GKAEIQARVTQLLDKLGLIDFRSRFPKDLSGGMRQRVA 134
            KAEI  RVTQLLDKLGLIDFR+RFPKDLSGGMRQRVA
Sbjct: 113 PKAEIHQRVTQLLDKLGLIDFRTRFPKDLSGGMRQRVA 150


>gi|300311645|ref|YP_003775737.1| taurine ABC transporter ATPase
           [Herbaspirillum seropedicae SmR1]
          Length = 261

 Score =  106 bits (265), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 72/105 (68%)

Query: 37  STLLNAIAGFALPSSGNITTDGKPVTEPGPDRGMVFQEYALFPWMTVEQNVAFGLEIKGV 96
           STLLNA+AGF   S G I+ DG+PV+ PG +RG+VFQ+ +L PW +V+ NVA GL+  GV
Sbjct: 46  STLLNAMAGFLPLSEGRISLDGQPVSGPGAERGVVFQKDSLLPWKSVQDNVALGLKFAGV 105

Query: 97  GKAEIQARVTQLLDKLGLIDFRSRFPKDLSGGMRQRVAXFFAVLP 141
            K++ + R  +LL  +GL DF    P +LSGGMRQRV    A+ P
Sbjct: 106 SKSDSRERAQELLRLVGLQDFARAAPYELSGGMRQRVGLARALAP 150


>gi|300312621|ref|YP_003776713.1| ABC transporter ATPase
           [Herbaspirillum seropedicae SmR1]
          Length = 257

 Score = 91.7 bits (226), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 62/98 (63%)

Query: 37  STLLNAIAGFALPSSGNITTDGKPVTEPGPDRGMVFQEYALFPWMTVEQNVAFGLEIKGV 96
           STLL+  AG   PSSG++  DG+ +  P P+R ++FQE AL+PW+T++QNVA  LE + V
Sbjct: 42  STLLHMAAGLEKPSSGSVAGDGQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSV 101

Query: 97  GKAEIQARVTQLLDKLGLIDFRSRFPKDLSGGMRQRVA 134
            K +   +    L+ + L  F   +P  +SGGMRQR A
Sbjct: 102 DKKKAAEQARVWLENVKLKGFEHYYPHQVSGGMRQRAA 139


>gi|300311841|ref|YP_003775933.1| nitrate/sulfonate/bicarbonate ABC
           transporter ATPase [Herbaspirillum seropedicae SmR1]
          Length = 263

 Score = 91.3 bits (225), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 62/101 (61%), Gaps = 4/101 (3%)

Query: 37  STLLNAIAGFALPSSGNITTDGKPVTEPGPDRGMVFQEY-ALFPWMTVEQNVAFGLEIKG 95
           STLL AI G+  P+SG I   G+ V EPGPDR MVFQE+  L PW TV QNV F L   G
Sbjct: 61  STLLKAIGGYLQPTSGAIRLKGREVHEPGPDRMMVFQEFDQLLPWKTVRQNVEFALHASG 120

Query: 96  V--GKAEIQARVTQLLDKLGLIDFRSRFPKDLSGGMRQRVA 134
              G+A  + R    + K+GL  F   +P  LSGGM+QRV+
Sbjct: 121 RLQGRAAAE-RAEYYISKVGLAKFIDSYPHMLSGGMKQRVS 160


>gi|300309874|ref|YP_003773966.1| nitrate/sulfonate/bicarbonate ABC
           transporter ATPase/permease [Herbaspirillum seropedicae
           SmR1]
          Length = 447

 Score = 90.9 bits (224), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 65/104 (62%)

Query: 37  STLLNAIAGFALPSSGNITTDGKPVTEPGPDRGMVFQEYALFPWMTVEQNVAFGLEIKGV 96
           ST+L  + G   PSSG+    GKP+     D  +VFQ +AL+PW+TVEQNVA GL     
Sbjct: 57  STILRCLTGLVEPSSGHTMAAGKPLYGVNRDASVVFQTFALYPWLTVEQNVAVGLMSHNP 116

Query: 97  GKAEIQARVTQLLDKLGLIDFRSRFPKDLSGGMRQRVAXFFAVL 140
            + E  A V + ++ +GL ++ S +P++LSGGMRQRV    A++
Sbjct: 117 TREERDAAVDRAIELIGLGNYHSAYPRELSGGMRQRVGIARALV 160


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.139    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 442,530
Number of extensions: 17113
Number of successful extensions: 225
Number of sequences better than 1.0e-08: 49
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 49
Length of query: 150
Length of database: 1,619,870
Length adjustment: 77
Effective length of query: 73
Effective length of database: 1,255,275
Effective search space: 91635075
Effective search space used: 91635075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 126 (53.1 bits)