BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0058.p (861 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310852|ref|YP_003774944.1| cation/multidrug efflux pump tr... 263 6e-71 gi|300310853|ref|YP_003774945.1| cation/multidrug efflux pump pr... 260 3e-70 gi|300311798|ref|YP_003775890.1| cation/multidrug efflux pump pr... 236 7e-63 gi|300313893|ref|YP_003777985.1| cation/multidrug efflux pump pr... 192 7e-50 gi|300313244|ref|YP_003777336.1| multidrug efflux system transme... 188 2e-48 >gi|300310852|ref|YP_003774944.1| cation/multidrug efflux pump transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1048 Score = 263 bits (671), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 192/677 (28%), Positives = 332/677 (49%), Gaps = 79/677 (11%) Query: 4 TRISIGNPVLATMMMMAFVVLGLFSYQRLRVDQFPDITFPVVVVQTTYPGASPENVESDV 63 +R I PV +++M+A +++G+ +Y+ L + P++ +P + V T YPGASP+ + S V Sbjct: 4 SRQFILRPVATSLLMLAILLVGIVAYRLLPLSALPEVDYPTIQVVTLYPGASPDVMTSSV 63 Query: 64 TRKIEETVNTINGINSLTSHSYEGLSVVIVEFDLTVDPAQGAQDVREKVALVQAAFRKEV 123 T +E + G+ ++S S G SV+ ++F+L + Q+V+ + ++ Sbjct: 64 TAPLERQFGQMPGLKQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGSNLLPSDL 123 Query: 124 DQPRI-TRFDPADQPIFSISVTNDPNAPNTRPRTLRELTTISDQVIKKRLENVRGVGSVT 182 P + ++ +PAD PI +++VT+ NT P L ++ + D I +++ + GVG V+ Sbjct: 124 PMPPVYSKVNPADTPIITLAVTS-----NTMP--LPKVQDLIDTRIAQKISQLSGVGLVS 176 Query: 183 LVGGVKRQINIYVKPNEMEALGIGVDQVIAAVKNENQELPTGAIRMADAEKVVQVQGRVK 242 L GG + + + + P + ALG+ +D V A+ N N G+ + +++ Sbjct: 177 LSGGQRPAVRMQLNPRAVAALGLNLDDVRTAIGNANVNQAKGSFDGPTRASTIDANDQLR 236 Query: 243 NPEDFKRIIVARRGSQPVTLEQIATVVDGQEEQETLALYNGQRTLALDILKAQGQNTIDV 302 + ++++ +I+A + P+ + +A VVDG E A N Q + ++I + G N I V Sbjct: 237 SADEYRNLIIAYKNGAPIRVSDVADVVDGAENVRLGAWANTQPAVIVNIQRQPGANVIAV 296 Query: 303 ADGLKQAIKDMEPNLQKLYPG-VRLQVIKDSSR--------------------------- 334 D +IK + P LQ PG + + ++ D + Sbjct: 297 VD----SIKKILPQLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSVALVVMVIFVF 352 Query: 335 ----------QXTLPVALIGTFLFMYMFGFTINMITLMALSLCVGLLIDDAIVVRENIVR 384 +P++L+GTF MY+ GF+IN +TLMAL++ G ++DDAIV+ ENI R Sbjct: 353 LRNVPATIIPSVAVPLSLVGTFAIMYLAGFSINNLTLMALTIATGFVVDDAIVMIENISR 412 Query: 385 HA--GMKVHGKFKSHKTAALEGTAEIGLAVLATTFSIVAVFLPVGFMGGIIGRFFHQFGI 442 + GMK AAL+G +IG +++ TFS++AV +P+ FMG ++GR FH+F + Sbjct: 413 YIEEGMK-------PMQAALKGAEQIGFTIISLTFSLIAVLIPLLFMGDVVGRLFHEFAV 465 Query: 443 TVTAAVLISMFVSFTLDPMLSSIWPDPDVHGDAHGEKRKHGWYAKTIGRVLDQFERLVQW 502 T+ ++LIS VS TL PM+ + H + + GW+ + F+R++ Sbjct: 466 TLAVSILISAVVSLTLTPMMCA-------RLLRHQPEEQQGWFYHKSQQF---FDRII-- 513 Query: 503 LSASYQKLLKWSLRHRILTLVLALLSFIAGLALPAAGLIGSEFVPQADYSE-SGVTFYTP 561 A Y +L+W L + LTL++A + GL + + F P D G++ T Sbjct: 514 --ARYGVMLQWVLARQKLTLLVAAATL--GLTVLLYVFVPKGFFPLQDTGVIQGISEATQ 569 Query: 562 VGSSLELTESKVHQVETVLRQFPEVVDTYSTVNT-GNSQGKNYATVFIRLKPRKERRLST 620 S + E K Q+ V+ Q P V S + G + N + I LKP R +S Sbjct: 570 SISFSAMGE-KQQQLAKVVLQDPAVESLTSFIGVDGTNATLNSGRMLINLKPHDVREVSA 628 Query: 621 AQLAPR-PGPXGAAAPG 636 + R G A PG Sbjct: 629 TDVIRRLQGKLAAEVPG 645 >gi|300310853|ref|YP_003774945.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1078 Score = 260 bits (665), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 184/670 (27%), Positives = 318/670 (47%), Gaps = 64/670 (9%) Query: 8 IGNPVLATMMMMAFVVLGLFSYQRLRVDQFPDITFPVVVVQTTYPGASPENVESDVTRKI 67 I P+ T++ + + G+ +++ L V P + +P + + + PGASPE + + V + Sbjct: 8 IQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMAATVATPL 67 Query: 68 EETVNTINGINSLTSHSYEGLSVVIVEFDLTVDPAQGAQDVREKVALVQAAFRKEV-DQP 126 E + I G+ +TS S + + + ++FDL+ D A+DV+ + + + P Sbjct: 68 ERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLPTGMPSNP 127 Query: 127 RITRFDPADQPIFSISVTNDPNAPNTRPRTLRELTTISDQVIKKRLENVRGVGSVTLVGG 186 + +PAD PI +++T+D T ++ +D ++ ++L VRGVG V++ G Sbjct: 128 TYRKVNPADAPILILAMTSDT-------MTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 Query: 187 VKRQINIYVKPNEMEALGIGVDQVIAAVKNENQELPTGAIRMADAEKVVQVQGRVKNPED 246 + + I + P + GIG V AV N P G + D + + K + Sbjct: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 Query: 247 FKRIIVARRGSQPVTLEQIATVVDGQEEQETLALYNGQRTLALDILKAQGQNTIDVADGL 306 + +IV+ R PV ++ +A V D + NG+ ++ + I + G N ID D Sbjct: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDN- 299 Query: 307 KQAIKDMEPNLQKLYP-GVRLQVIKD------SSRQXT---------------------- 337 ++++ P LQ P + ++V+ D +S + T Sbjct: 300 ---VRELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNA 356 Query: 338 ---------LPVALIGTFLFMYMFGFTINMITLMALSLCVGLLIDDAIVVRENIVRHAGM 388 +PV+LIGTF MY+ GF+++ ++LMAL++ G ++DDAIVV ENI RH Sbjct: 357 RATLIPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRH--- 413 Query: 389 KVHGKFKSHKTAALEGTAEIGLAVLATTFSIVAVFLPVGFMGGIIGRFFHQFGITVTAAV 448 + K +K AAL G E+G VL+ + S++AVF+P+ M GI+GR F +F IT++ A+ Sbjct: 414 -IESGMKPYK-AALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAI 471 Query: 449 LISMFVSFTLDPMLSSIWPDPDVHGDAHGEKRKHGWYAKTIGRVLDQFERLVQWLSASYQ 508 L+S+ VS T PM+ + D D +R+H W K + DQ + + + +YQ Sbjct: 472 LVSLVVSLTTTPMMCAQLLRHDPAADEARRQRRHPWLQK----IADQSAAIFEDMLLAYQ 527 Query: 509 KLLKWSLRHRILTLVLALLSFIAGLALPAAGLIGSEFVPQADYSESGVTFYTPVGSSLEL 568 + L W+LR L +++ L + + L A I F PQ D S + Sbjct: 528 RTLAWALRAAPLMMLILLATIALNVYLYKA--IPKGFFPQQDTGRLVGGIRGDQAISFQA 585 Query: 569 TESKVHQVETVLRQFPEVVDTYSTVNTGNSQGKNYATVFIRLKPRKERRLSTAQLAPRPG 628 +K+++ ++R P V D V Q +N +++ LKP ER+ S ++ R Sbjct: 586 MRTKLNEFIDIVRADPAVSD---VVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLR 642 Query: 629 PXGAAAPGRR 638 A G R Sbjct: 643 IKTAKVAGAR 652 >gi|300311798|ref|YP_003775890.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1051 Score = 236 bits (601), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 184/673 (27%), Positives = 315/673 (46%), Gaps = 102/673 (15%) Query: 8 IGNPVLATMMMMAFVVLGLFSYQRLRVDQFPDITFPVVVVQTTYPGASPENVESDVTRKI 67 I P+ T++ +A +++G+ + L V P + FP + V PG SPE + S+V + + Sbjct: 8 IKRPIGTTLLAIAILLVGVAVWPLLPVAPLPQVDFPTIQVTAQLPGGSPETMASNVAQPL 67 Query: 68 EETVNTINGINSLTSHSYEGLSVVIVEFDLTVDPAQGAQDVREKVALVQAAFRKEV-DQP 126 E + I G++ +TS S G + + ++FDL + A DV+ + + + P Sbjct: 68 ERQFSLIAGLSQMTSQSTLGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPANLPNPP 127 Query: 127 RITRFDPADQPIFSISVTNDPNAPNTRPRTLRELTTISDQVIKKRLENVRGVGSVTLVGG 186 + +PAD PI +SV ++ P T+ + +D ++ +++ + GVG V + G Sbjct: 128 TFRKINPADSPIMIMSVQSE-----ALPLTV--VNDYADNILAQQISQISGVGLVNVNGQ 180 Query: 187 VKRQINIYVKPNEMEALGIGVDQVIAAVKNENQELPTGAIRMADAEKVVQVQGRVKNPED 246 K + I V P ++ LG+ ++ + + P G + A V ++ E Sbjct: 181 QKPAVRIQVDPAKLATLGLSLEDIRGVIATTTVNQPKGTVDGARQAFTVYTNDQLLKAEQ 240 Query: 247 FKRIIVARRGSQPVTLEQIATVVDGQEEQETL-------------ALYNGQRTLALDILK 293 + +++A R P+ ++ I VDG E + ++ NG R++ L I K Sbjct: 241 WNDMVLAWRNGAPIRVKDIGIAVDGPENNKIAAWAFAGAANTADHSITNG-RSIVLAITK 299 Query: 294 AQGQNTIDVADGLKQAIKDMEPNLQKLYPGV--------RLQVIKDSSR----------- 334 G N I+ +K A+ P L+ P R Q I+ S Sbjct: 300 QPGANVIETVGRIKAAM----PRLRAAIPAAIHVNTLIDRTQTIRASVEDVEFTLVLTIA 355 Query: 335 -------------------QXTLPVALIGTFLFMYMFGFTINMITLMALSLCVGLLIDDA 375 T+P+A++GT MY+ G++++ ++LMAL++ VG ++DDA Sbjct: 356 LVVMVIFVFLRNVAATLIPSVTVPLAIMGTAGVMYVVGYSLDNLSLMALTIAVGFVVDDA 415 Query: 376 IVVRENIVRHA--GMKVHGKFKSHKTAALEGTAEIGLAVLATTFSIVAVFLPVGFMGGII 433 IV+ ENI R+ GM + AAL+G EIG +++ + S+VAVF+P+ MGGI+ Sbjct: 416 IVMLENIYRYVEEGM-------TPLEAALKGAGEIGFTIISISVSLVAVFIPLLLMGGIV 468 Query: 434 GRFFHQFGITVTAAVLISMFVSFTLDPMLSSIWPDPDVHGDAHGEKRKHGWYAKTIGRVL 493 GR F +F +TVT + +S+ +S TL PML S + + HG HG + + W Sbjct: 469 GRLFREFAVTVTLTIAVSVIISLTLTPMLCSRFLKNE-HGQRHG--KLYQW--------- 516 Query: 494 DQFERLVQWLSASYQKLLKWSLRHRILTLVLALLSFIAGLALPAAGLIGSEFVPQADYSE 553 FER + A Y++ L ++H+ +T L+SFIA LAL A I F+P+ + + Sbjct: 517 --FERCFDAMLAGYKRGLDVVMKHQFIT----LMSFIATLALTAVLFI---FIPKGFFPQ 567 Query: 554 SGVTFYTPVGSSLELTES-----KVHQVETVLRQFPEVVDTYSTVNTGNSQGKNYATVFI 608 S + T S ++ +V V+RQ P+V+ + S N FI Sbjct: 568 QDNGVIVGFAESAQDTSSAAMHERLLKVAEVVRQDPDVI---GFAMSAGSTTFNTGQFFI 624 Query: 609 RLKPRKERRLSTA 621 LKP+ + R + A Sbjct: 625 ALKPKDQGRTTNA 637 >gi|300313893|ref|YP_003777985.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1051 Score = 192 bits (489), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 174/663 (26%), Positives = 306/663 (46%), Gaps = 80/663 (12%) Query: 5 RISIGNPVLATMMMMAFVVLGLFSYQRLRVDQFPDITFPVVVVQTTYPGASPENVESDVT 64 R I P+ A ++ + ++ G+ S + L ++Q+PDI P V ++ TY GAS + +E VT Sbjct: 3 RFFIDRPIFAWVIAIIIMLGGMMSIRSLSLEQYPDIAPPKVNIKATYTGASAKTLEDSVT 62 Query: 65 RKIEETVNTINGINSLTSHSYEGLSVVI-VEFDLTVDPAQGAQDVREKVALVQAAFRKEV 123 + IE+ + ++ + +++ S S + + F +P V+ K+ V A + V Sbjct: 63 QVIEQQMKGLDNLQYMSASSSSAGSATVSLTFTAGTNPDVAQMQVQNKLQQVTARLPQAV 122 Query: 124 DQPRITRFDPADQPIFSISVTNDPNAPNTRPRTLREL--TTISDQVIKKRLENVRGVGSV 181 +T + + +S+T+D P + + +T++DQ+ V GVG V Sbjct: 123 QNNGVTVTKASTDILMVLSLTSDD--PRITSIDIGDFISSTLTDQI-----SRVEGVGDV 175 Query: 182 TLVGGVKRQINIYVKPNEMEALGIGVDQVIAAVKNENQELPTGAIRMADAE------KVV 235 T G + I++ P +++ + + +A++ +N E+ G I A+ + Sbjct: 176 TAF-GTNYAMRIWIDPAKLQKYALMPSDITSALQAQNTEVSAGEIGALPAQPGQQINATI 234 Query: 236 QVQGRVKNPEDFKRIIV-ARRGSQPVTLEQIATVVDGQEEQETLALYNGQRTLALDILKA 294 + ++ P++F+ IIV + V L +A V G E + + NG+ + AL I A Sbjct: 235 TARSKLTTPDEFRNIIVKSSVDGSVVKLSDVARVELGGESYQVASQQNGKPSSALAIQLA 294 Query: 295 QGQNTIDVADGLKQAIKDMEPNL---QKL--------YPGVRL---QVIKDSSR------ 334 G N + AD +K+ + ++EP KL P VR+ +V+K Sbjct: 295 TGANALATADAVKKKLAELEPYFPASMKLKTNIAYDTTPFVRVSLEEVVKTLIEAIVLVV 354 Query: 335 ----------------QXTLPVALIGTFLFMYMFGFTINMITLMALSLCVGLLIDDAIVV 378 T+PV L+GTF + MFG++IN +T+ + L +GLL+DDAIVV Sbjct: 355 LIMYLFLQNIRATFIPAITVPVVLLGTFGILAMFGYSINTLTMFGMVLAIGLLVDDAIVV 414 Query: 379 RENIVRHAGMKVHGKFKSHKTAALEGTAEIGLAVLATTFSIVAVFLPVGFMGGIIGRFFH 438 EN+ R + + S K A + EI A++ + AVF+P+ F GG G + Sbjct: 415 VENVERL----MSEEKLSPKEATRKSMQEITGALVGIAMVLSAVFIPMAFFGGSTGVIYR 470 Query: 439 QFGITVTAAVLISMFVSFTLDPMLSSIWPDPDVHGDAHGEK-RKHGWYAKTIGRVLDQFE 497 QF IT+ +A+ +S+ V+ TL P L + P H H ++ R W+ ++ R +++ Sbjct: 471 QFSITIVSAMALSVMVALTLTPALCATLLKP--HAGGHVQQGRFFTWFNRSFDRSATRYQ 528 Query: 498 RLVQWLSASYQKLLKWSLRHRILTLVLALLSFIAGLALPAAGLIGSEFVPQADYSESGVT 557 LLK R ++ ++A+ + + LP + F+P+ D Sbjct: 529 -------GGVAGLLKRGKRGLLMYALIAVAMAVLFMRLP------TSFLPEEDQGVLMAQ 575 Query: 558 FYTPVGSSLELTESKVHQVETVLRQFPEVVDTYSTV----NTGNSQGKNYATVFIRLKPR 613 P G++ E T + V V+ PE V++ + GNSQ N A FIRLK Sbjct: 576 IQLPTGATAEQTATVVKTVQEYFMNKPESVESVLAIVGAGVGGNSQ--NGARAFIRLKDW 633 Query: 614 KER 616 ++R Sbjct: 634 EQR 636 >gi|300313244|ref|YP_003777336.1| multidrug efflux system transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1033 Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 165/667 (24%), Positives = 305/667 (45%), Gaps = 81/667 (12%) Query: 5 RISIGNPVLATMMMMAFVVLGLFSYQRLRVDQFPDITFPVVVVQTTYPGASPENVESDVT 64 R I P+ A ++ + V+ G+ + +L + ++P + P V + TYPGA+P+ + V Sbjct: 3 RFFIDRPIFAWVVALFIVLFGVIAMSQLPIARYPSVAPPTVSINATYPGATPQTMNDGVI 62 Query: 65 RKIEETVNTINGINSLTSHS-YEGLSVVIVEFDLTVDPAQGAQDVREKVALVQAAFRKEV 123 IE ++ + + S + G + + V F DP DV+ K+ ++A + V Sbjct: 63 SLIERELSGVKNLLYFESSADTSGTAQISVTFKPGTDPELAQVDVQNKLKAIEARLPQTV 122 Query: 124 DQPRITRFDPADQPIFSISVTNDPNAPNTRPRTLRELTTISDQVIKKRLENVRGVGSVTL 183 Q +T A + +S+T+ + R +R ++ ++++ L + GVG V L Sbjct: 123 RQNGVTVESAASSFLLMVSLTSV----DGRYDEVRLNDYLARNIVEE-LRRMEGVGRVQL 177 Query: 184 VGGVKRQINIYVKPNEMEALGIGVDQVIAAVKNENQELPTGAIRMADAEKV--------V 235 G ++ + I++ P ++ A G+ V + A+ +N ++ G R+ DA V + Sbjct: 178 FGA-EQAMRIWLDPFKLNAYGLTVTDISTAISQQNAQIAPG--RLGDAPAVRGQQIAMPL 234 Query: 236 QVQGRVKNPEDFKRIIV-ARRGSQPVTLEQIATVVDGQEEQETLALYNGQRTLALDILKA 294 VQG++++P F I++ A+ V L +A V G + NG+ + + Sbjct: 235 TVQGQLQSPAQFAAIVLKAKADGSRVLLGDVARVELGAQSYAFANRENGKPAGVAAVQLS 294 Query: 295 QGQNTIDVADGLKQAIKDMEPNLQK---------LYPGVRLQVIK--------------- 330 G N + A ++ ++++ P+L + P V++ + K Sbjct: 295 PGANAVRTAAAIQARMEELRPSLPQGMAFSLPYNTAPFVKISIQKVVQTLIEAMVLVFLV 354 Query: 331 -----DSSRQXTLP-----VALIGTFLFMYMFGFTINMITLMALSLCVGLLIDDAIVVRE 380 + R +P +AL+GT M + G+++N++T+ + L +G+++DDAIVV E Sbjct: 355 MYLFLQNVRYTVIPAIVAPIALLGTLAVMQLAGYSVNVLTMFGMVLAIGIIVDDAIVVVE 414 Query: 381 NIVR---HAGMKVHGKFKSHKTAALEGTAEIGLAVLATTFSIVAVFLPVGFMGGIIGRFF 437 N+ R H G+ + A ++ EI A++ T + AVF+P+ GG +G + Sbjct: 415 NVERIMAHEGL-------GPREATIKAMGEITGAIIGITLVLTAVFIPMALAGGSVGVIY 467 Query: 438 HQFGITVTAAVLISMFVSFTLDPMLSS--IWPDPDVHGDAHGEKRKHGWYAKTIGRVLDQ 495 QF + + ++L S F++ +L P L + + P P H D K G++ G Sbjct: 468 RQFSVAMAVSILFSAFLALSLTPALCATLLRPVPAGHHD------KRGFF----GAFNRA 517 Query: 496 FERLVQWLSASYQKLLKWSLRHRILTLVLALLSFIAGLALPAAGLIGSEFVPQADYSESG 555 F RL ++ +L+ LR ++ L+ L + ALP+A F+P+ D Sbjct: 518 FNRLTARYESALGRLIARGLRMMLVYAALSGLLVVGMQALPSA------FLPEEDQGYFM 571 Query: 556 VTFYTPVGSSLELTESKVHQVETVLRQFPEVVDTYSTVNTGNS-QGKNYATVFIRLKPRK 614 +F P ++ E T V Q E L+ ++ S + G S G N A F LK K Sbjct: 572 TSFQLPADATTERTARAVDQFERYLKGREDIGANLSVLGFGFSGSGPNAAMAFTELKDWK 631 Query: 615 ERRLSTA 621 ER+ ST+ Sbjct: 632 ERKGSTS 638 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.137 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,408,243 Number of extensions: 100422 Number of successful extensions: 378 Number of sequences better than 1.0e-08: 11 Number of HSP's gapped: 332 Number of HSP's successfully gapped: 14 Length of query: 861 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 768 Effective length of database: 1,179,515 Effective search space: 905867520 Effective search space used: 905867520 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)