BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0150.0022.p
         (245 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309638|ref|YP_003773730.1| CDP-diacylglycerol pyrophosphat...   303   6e-84

>gi|300309638|ref|YP_003773730.1| CDP-diacylglycerol pyrophosphatase
           [Herbaspirillum seropedicae SmR1]
          Length = 254

 Score =  303 bits (777), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 180/238 (75%), Gaps = 1/238 (0%)

Query: 5   LPLLAL-LFATAAPACAANPDALWQIASAQCLPNSINAGDPKPCALVDRERGFVILKDIV 63
           LPLLAL L     PA AA+P  LW+I S QC+P+   +G P+PCA+VD  RGFVILKD+V
Sbjct: 15  LPLLALWLVGAPRPAMAADPHKLWEITSQQCVPHMQASGQPQPCAMVDLARGFVILKDLV 74

Query: 64  GAAQYLLIPTIRLAGIESRELLKDDAPNYWRYAWEQRGRVGAALGRPLEPSQLGLEVNSA 123
           G AQYLL+PT RL GIES ELL+  APNYW YAW+QR RV   LGR L   QLG+EVNSA
Sbjct: 75  GPAQYLLMPTRRLTGIESPELLEPQAPNYWAYAWQQRARVAQTLGRALSDEQLGVEVNSA 134

Query: 124 AARSQLQLHIHIDCMRRDVPDLLRAHRRDPLGKWMPFMIEGHRYWVMRLEADALQSKDPF 183
           A RSQL LH+HIDCMRRDV   L AHR DPL +W P+  EGHRYWVMRL A+AL   DPF
Sbjct: 135 AGRSQLHLHLHIDCMRRDVAASLAAHRDDPLQQWRPWHFEGHRYWVMRLPAEALAQHDPF 194

Query: 184 KLAALRSAHAANAMGAQSLLLTGARFDDGAEGFYLINMPVNFDRAEFGSAEVLLDHGC 241
           KLAA RSA+AA  M +QSLLLTGARF DG  GF+L+NMPVNFD  E GSAEVL+DH C
Sbjct: 195 KLAAARSAYAAANMASQSLLLTGARFADGGSGFFLVNMPVNFDLQEQGSAEVLMDHDC 252


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.138    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 703,083
Number of extensions: 27993
Number of successful extensions: 106
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 162
Effective length of database: 1,226,865
Effective search space: 198752130
Effective search space used: 198752130
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)