BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0147.0014.p
         (93 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309801|ref|YP_003773893.1| phenylpropionate dioxygenase [H...   154   2e-39
gi|300313279|ref|YP_003777371.1| vanillate O-demethylase oxygena...    59   5e-11

>gi|300309801|ref|YP_003773893.1| phenylpropionate dioxygenase
          [Herbaspirillum seropedicae SmR1]
          Length = 343

 Score =  154 bits (388), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 77/87 (88%)

Query: 1  MLVTKQKVLRKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKL 60
          MLVT+QKVLR+FWYA+MPIA L  GP+PFTLLGE +VVWLK  G PAALQDRCCHRTA+L
Sbjct: 1  MLVTQQKVLRRFWYALMPIAQLRQGPQPFTLLGEKLVVWLKEDGAPAALQDRCCHRTARL 60

Query: 61 SKGFVENGNIVCGYHGWTFDCAGAXLR 87
          SKGFVENGNIVCGYHGWTF+  GA +R
Sbjct: 61 SKGFVENGNIVCGYHGWTFNGEGACVR 87


>gi|300313279|ref|YP_003777371.1| vanillate O-demethylase
          oxygenase subunit oxidoreductase [Herbaspirillum
          seropedicae SmR1]
          Length = 349

 Score = 59.3 bits (142), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%)

Query: 10 RKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKLSKGFVENGN 69
          +  WY       ++  P    + GE IV +  + GK AA++D C HR A LS GFV  G 
Sbjct: 4  KNAWYVACTPDEIDSKPLGRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFVREGQ 63

Query: 70 IVCGYHGWTFDCAGAXL 86
          +VCGYHG    C G  +
Sbjct: 64 LVCGYHGLEMGCDGKAI 80


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.139    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 267,271
Number of extensions: 8661
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 2
Length of query: 93
Length of database: 1,619,870
Length adjustment: 63
Effective length of query: 30
Effective length of database: 1,321,565
Effective search space: 39646950
Effective search space used: 39646950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 123 (52.0 bits)