BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0138.0021.p
         (322 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311400|ref|YP_003775492.1| xylanase/chitin deacetylase [He...   532   e-152

>gi|300311400|ref|YP_003775492.1| xylanase/chitin deacetylase
           [Herbaspirillum seropedicae SmR1]
          Length = 313

 Score =  532 bits (1370), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 252/312 (80%), Positives = 276/312 (88%)

Query: 10  LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQVFRPGFFSK 69
           +P++TLKIDADTYRGTR GVPNL+ QL RH A ATFLFSLGPDHTGWALKQ+FRPGFFSK
Sbjct: 1   MPKLTLKIDADTYRGTRVGVPNLISQLRRHGAGATFLFSLGPDHTGWALKQIFRPGFFSK 60

Query: 70  VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCAKYMRAVRDAGFECGIHTWDHRVWQDHVRT 129
           VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCA +MR    AGFECGIHTWDHRVWQD+VRT
Sbjct: 61  VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRQAHAAGFECGIHTWDHRVWQDNVRT 120

Query: 130 RDAAWTRETMQRSYARFHDIFGHTPVTHGAAGWQMNDYAFAQLDEFGIAYSSDGRAVLNE 189
            DA WT ETMQ++Y R+HDIFGH P THGAAGWQMND+AF QLD+FGIAYSSDGR+ L E
Sbjct: 121 ADAQWTTETMQQAYGRYHDIFGHAPRTHGAAGWQMNDHAFVQLDQFGIAYSSDGRSQLRE 180

Query: 190 DGSLLDFAAGPHRLSSGGKTLSCVQLPTTLPTLDELLGRTINGVVMDASNVAAMLLRLTE 249
           DGSL D  AGPHRLS  GK LSCVQLPTTLPTLDE+LGRTI G ++DA N A +LL LT+
Sbjct: 181 DGSLADQDAGPHRLSVFGKPLSCVQLPTTLPTLDEILGRTIRGKLIDAGNAAELLLELTK 240

Query: 250 QRRDHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGEYYQGVKDDVLPILPIVWGE 309
             RDHVFTLHAELEGQKLAPIFE+LL GWRAQGY+LVSMG+YYQ +++DVLPILPI WGE
Sbjct: 241 TPRDHVFTLHAELEGQKLAPIFERLLAGWRAQGYELVSMGDYYQSIQNDVLPILPISWGE 300

Query: 310 LPGRSGDMILQA 321
           LPGRSGDMILQA
Sbjct: 301 LPGRSGDMILQA 312


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.138    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,062,009
Number of extensions: 43730
Number of successful extensions: 111
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 237
Effective length of database: 1,217,395
Effective search space: 288522615
Effective search space used: 288522615
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)