BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0138.0019.p
         (485 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible ...   961   0.0  
gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible ...   107   3e-24

>gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 566

 Score =  961 bits (2484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/483 (94%), Positives = 475/483 (98%)

Query: 3   ESRAKSTTSRIADKLGVSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMITLEELDNHKKGM 62
           E R KS TSR+ADKLG SKLFVLDTNVLMHDPTSLFRFEEHDIYLPM+TLEELDNHKKGM
Sbjct: 84  EIRPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMVTLEELDNHKKGM 143

Query: 63  SEVARNARQISRSLDALVSDIAEDAIDLGIPLSKLGNKDAKGRLFFQTKLQNAKLPDGLP 122
           SEVARNARQISRSLDALVSD+AED+IDLGIPL+KLGNKDAKGRL+FQTKLQNA LP+GLP
Sbjct: 144 SEVARNARQISRSLDALVSDVAEDSIDLGIPLAKLGNKDAKGRLYFQTKLQNAALPEGLP 203

Query: 123 EGKADNQILGVVRALDQQYPDRPVVLVSKDINMRIKARAIGLPAEDYFNDHVLEDTDLLY 182
           EGKADNQILGVVRALDQQYP+RPVVLVSKDINMR+KARAIGLPAEDYFNDHVLEDTDLLY
Sbjct: 204 EGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYFNDHVLEDTDLLY 263

Query: 183 SGIQQLPDDFWTKHGKGMESWQENKHGTSYTYYRVTGPHVPSMLMNQFVFIEPKNGEPAF 242
           SGIQQLPDDFW KHGKGMESWQE++HG+SYTYYRVTGP+VPS+L+NQFVFIEPKNGEPAF
Sbjct: 264 SGIQQLPDDFWNKHGKGMESWQESRHGSSYTYYRVTGPYVPSLLVNQFVFIEPKNGEPAF 323

Query: 243 YGQVTQINGKTAVLQTLRDYGHTKNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGT 302
           YGQVTQINGKTAVLQTLRD+GH KNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGT
Sbjct: 324 YGQVTQINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGT 383

Query: 303 GKTLLALAAGLAQVLETKNYNEIIVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEV 362
           GKTLLALA+GLAQVLETK YNEIIVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEV
Sbjct: 384 GKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEV 443

Query: 363 LNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVT 422
           LNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVT
Sbjct: 444 LNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVT 503

Query: 423 RAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWSHSGHVTLARGERSRLADHAS 482
           RAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGW+HSGHVTLARGERSRLADHAS
Sbjct: 504 RAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADHAS 563

Query: 483 DVL 485
           DVL
Sbjct: 564 DVL 566


>gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 373

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 13/176 (7%)

Query: 266 KNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGTGKTLLALAAGLAQVLETKNYNEI 325
           K     +  R   Q+  LN ++  E D    +G AGTGKT LA+A  +   LE      I
Sbjct: 132 KTRKHDLRGRTPHQSQYLNAIL--EHDITFGVGPAGTGKTYLAVACAV-DALERDAVQRI 188

Query: 326 IVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEVLNKSDGDAGEWGRAATQDLI-RS 384
           ++TR  V  GE +GFLPG   +K+ P++    D L  L          G   TQ L  + 
Sbjct: 189 VLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDL---------LGFDRTQKLFEKQ 239

Query: 385 RIKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQID 440
            I+I  L +MRGRT  + F+I+DEAQN TP+QMK  +TR G G+K V  G++ Q+D
Sbjct: 240 AIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVD 295


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.317    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,417,638
Number of extensions: 57859
Number of successful extensions: 139
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 2
Length of query: 485
Length of database: 1,619,870
Length adjustment: 89
Effective length of query: 396
Effective length of database: 1,198,455
Effective search space: 474588180
Effective search space used: 474588180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 132 (55.5 bits)