BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0138.0005.p
         (733 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312095|ref|YP_003776187.1| alkaline phosphatase [Herbaspir...  1009   0.0  

>gi|300312095|ref|YP_003776187.1| alkaline phosphatase
           [Herbaspirillum seropedicae SmR1]
          Length = 651

 Score = 1009 bits (2610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/604 (80%), Positives = 533/604 (88%), Gaps = 4/604 (0%)

Query: 6   RQISTPTSNGAEIQPK--RRELLKVFASAPLLPLTLSASGLLAGCATASNRSG--FASAS 61
           RQ +      A  QP+  RR LLK   +APLLPLT   S      A A+  +G  FASA 
Sbjct: 2   RQPAPTAIQSAADQPQAGRRSLLKALGAAPLLPLTGGLSASALLAACATPGAGKPFASAR 61

Query: 62  FSGMAAPSLANPAAMATTTVASSLDVVFRDGAKQSYQLTYQPFFMTGDMVPDGKGGKLLA 121
           F+GM AP+LANPAAMA+TTV S+L+V F DG+KQSY+L YQPFFMTGDMVPDGKGG +LA
Sbjct: 62  FTGMPAPTLANPAAMASTTVGSALEVTFADGSKQSYKLAYQPFFMTGDMVPDGKGGTILA 121

Query: 122 GGYYDINNQPIIDRSVPGKERHFFSDCPDGSSLLTLKGAQVPGVNGNTVFAVVQFEYTTR 181
           GGY DINNQPIIDRSVPGKER FFSDCPDGSSLLT+ GA+VPGV GN VFAVVQFEYTTR
Sbjct: 122 GGYLDINNQPIIDRSVPGKERQFFSDCPDGSSLLTVAGAKVPGVKGNAVFAVVQFEYTTR 181

Query: 182 DQKQAAMYGQLPSPIAVLTLDQDPATGKLSLVKYHNVDTSAVNGLWITCGASLSPWNTHL 241
           DQKQAAMYGQLPSPIAVLTLDQDP++GKLSLVKYHNVDTS VNGLWITCGASLSPWNTHL
Sbjct: 182 DQKQAAMYGQLPSPIAVLTLDQDPSSGKLSLVKYHNVDTSQVNGLWITCGASLSPWNTHL 241

Query: 242 SSEEYEPDATAIAGNPQFQAFSKNLFGDATRANPYHYGHLPEITVHADGSGSVVKHYCLG 301
           SSEEYEPDA+AIA NPQF+AFSKNL+GD +RANPYHYGHLPE+TV+ DG+GS+ KHYCLG
Sbjct: 242 SSEEYEPDASAIASNPQFKAFSKNLYGDESRANPYHYGHLPEVTVNPDGTGSIKKHYCLG 301

Query: 302 RISHELVQVMPDRRTVLMGDDATNGGLFMFIADRAADLSAGTLYVATWTQTSGVGPGAGT 361
           RISHELVQVMPD+RTVLMGDDATNGGLFMFIADRAADLS+GTLYVA W Q SGVGPGAG 
Sbjct: 302 RISHELVQVMPDQRTVLMGDDATNGGLFMFIADRAADLSSGTLYVARWEQVSGVGPGAGK 361

Query: 362 LGWVRLGHATSAEIKALADKLKAADIMDVKTSDPQDASYTKIPFNGKTNWVKLKPGMEQA 421
           L WVRLG ATSAEIKA+AD+ KA DIMD++TSDP DAS++KIPFNGK NWV++KPGM++A
Sbjct: 362 LSWVRLGSATSAEIKAMADRYKAVDIMDIRTSDPADASFSKIPFNGKFNWVRVKPGMQKA 421

Query: 422 AAFLETHRYAALKGGSLGFTKMEGTTVNAKDKIAYSAMSYVQTSMLDGSGGIKVQGPKAG 481
           AAFLETHRYAAL GGSLGFTKMEGTTVNA+DKIAYSAMSYVQTSML+GSG IKV+GPKAG
Sbjct: 422 AAFLETHRYAALAGGSLGFTKMEGTTVNARDKIAYSAMSYVQTSMLNGSGHIKVEGPKAG 481

Query: 482 AVYALNMKGGQNDLSGTAIDSAWVPVDMAPPAALVGEDLKQADALGNLAHADKIANPDNI 541
           AVYALN++GGQ D  G AIDS WV +DMAPPAALVG DLK  DALGNLA  + IANPDNI
Sbjct: 482 AVYALNLRGGQRDAGGNAIDSEWVAIDMAPPAALVGVDLKTPDALGNLADQEHIANPDNI 541

Query: 542 KFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKQLSRVLSCPAGAESTGLHAVDEINGWTYV 601
           KFSEKLRTLFIGEDSGMHVNNFLWAYNVDTK L+RVLSCPAGAESTGLHAVDEINGWTYV
Sbjct: 542 KFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKALTRVLSCPAGAESTGLHAVDEINGWTYV 601

Query: 602 MSNF 605
           MSNF
Sbjct: 602 MSNF 605


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.316    0.130    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,037,247
Number of extensions: 80428
Number of successful extensions: 212
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 1
Length of query: 733
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 641
Effective length of database: 1,184,250
Effective search space: 759104250
Effective search space used: 759104250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 134 (56.2 bits)