BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0136.0039.p
         (698 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311422|ref|YP_003775514.1| fusaric acid resistance membran...  1050   0.0  

>gi|300311422|ref|YP_003775514.1| fusaric acid resistance membrane
           protein [Herbaspirillum seropedicae SmR1]
          Length = 734

 Score = 1050 bits (2716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/646 (80%), Positives = 575/646 (89%), Gaps = 1/646 (0%)

Query: 18  FGRQLHDAAADWWQTDFPNWIYVFKMVFAGLLALGIGYALDLESPRSGLITVFIVMQPQS 77
           F  +L +AAADWW++D P W+YVFKMV AGLLALGIGY LDLESPRS LITVFIVMQPQS
Sbjct: 8   FKAKLREAAADWWRSDAPTWVYVFKMVLAGLLALGIGYGLDLESPRSALITVFIVMQPQS 67

Query: 78  GMILAKSFYRVIGTLVGSVAVVVFVGLFAQTPELFLLATACWIGLCTFGSALNRNFRSYG 137
           GMILAKSFYRVIGTLVGS+A+VVFVGLFAQTPELFLLA+A WIGLCT GSA NRNFRSYG
Sbjct: 68  GMILAKSFYRVIGTLVGSMAIVVFVGLFAQTPELFLLASALWIGLCTVGSAHNRNFRSYG 127

Query: 138 FVLSGYTVALIGIPAALNPALTFDSVMTRVTEITVGIVCAGVVSALVFPQASAPGLVRVI 197
           FVLSGYTVALIG+PAAL+PA+TFDSVMTRVTEI VGIVC G+VSALVFPQASAPGLVR+I
Sbjct: 128 FVLSGYTVALIGLPAALHPAITFDSVMTRVTEIMVGIVCVGLVSALVFPQASAPGLVRII 187

Query: 198 RGRFTAFVDLIGSTLGGSADRKALEAANARFVGDIIGLEALRSSAIFEDPEIRLRSGRLT 257
           RGRFTAFVDLI +TLGGSADRK LEA NARFVGDIIGLEA+RS+AIFEDPE+RLRSGRLT
Sbjct: 188 RGRFTAFVDLISATLGGSADRKQLEATNARFVGDIIGLEAMRSAAIFEDPEVRLRSGRLT 247

Query: 258 RMNSEFMALSTRVHGLHQLMNRLHDSRNPSAQLVIDAISPYFREVQPLLTRSGGEPVMTA 317
           RMNSEFMALSTR+H LHQLMNRLH +   SAQ+VIDAISPYFREVQPLLTR+ GEPVM+A
Sbjct: 248 RMNSEFMALSTRMHALHQLMNRLHANPAASAQVVIDAISPYFREVQPLLTRASGEPVMSA 307

Query: 318 VDAADAALKLESYKRELPRRVRATRNAHA-QKLDDDAVLDFDTASELLYRVIEELHAYTL 376
           +DAADAALKL++YKRELPRRVRATR+  A Q   D A+LDFDTASELLYRVIEELHAYTL
Sbjct: 308 LDAADAALKLDAYKRELPRRVRATRSTLAGQCQSDSAMLDFDTASELLYRVIEELHAYTL 367

Query: 377 TYASLVQRRHEREQWEHAYAPKTSMVTASVAGARAAITLIGLSTFWILSGWPSGDVAALN 436
           TYAS+ QR HEREQWEH+YAPKTSM TA +AGARAA+ ++ L+ FWI SGWPSGDVA LN
Sbjct: 368 TYASMTQRHHEREQWEHSYAPKTSMTTALIAGARAAVVMLCLAGFWIASGWPSGDVAVLN 427

Query: 437 AAAFCAITSAAPDPAKATRTVTMGVALAVVLGYFYTFHIVPQLDGFWMLAAALTPVLMLA 496
           AAAFCAITSAAPDPAKATRTV +GV  A V GY YTFHI+P+LDG+WMLA+AL PVLMLA
Sbjct: 428 AAAFCAITSAAPDPAKATRTVAIGVLFAAVAGYVYTFHILPRLDGYWMLASALMPVLMLA 487

Query: 497 VLLTTRPTLAGYGLGICIFFPFVAVPDNLAHFNAAGYLNESIALMVSLIVTTGAFMVLLP 556
           V LTT+P  AGYGLGICIFFPF+AVPDN AHFNAAGYLNES+AL+VSL+VT  AFMVLLP
Sbjct: 488 VYLTTKPKWAGYGLGICIFFPFLAVPDNFAHFNAAGYLNESVALVVSLLVTAVAFMVLLP 547

Query: 557 PTTNWTVRHLEKQLRKQVVQACFARLAHLTLQFESGTRDLMHQITMLTGSRPALRKDAFG 616
           PTT+WTVR LEKQLRKQVV ACF +LAHL L+FESGTRDLMHQITM T SRP LR+ A G
Sbjct: 548 PTTDWTVRVLEKQLRKQVVDACFGKLAHLALKFESGTRDLMHQITMFTTSRPLLRQKALG 607

Query: 617 WMFATLEIGHAVIELRTELHGIRSGNPGLLSPAAYAALDRXSRRRP 662
           WMFATLE+GHA+IELR ELHGIR+  P LL  +AYAAL+R     P
Sbjct: 608 WMFATLEVGHAIIELRNELHGIRTEAPDLLPASAYAALNRLREAIP 653


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,986,076
Number of extensions: 80973
Number of successful extensions: 414
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 413
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 606
Effective length of database: 1,184,250
Effective search space: 717655500
Effective search space used: 717655500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 134 (56.2 bits)