BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0136.0007.p (202 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodie... 301 3e-83 gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodie... 154 6e-39 gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodie... 142 2e-35 gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphod... 139 1e-34 gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodie... 78 4e-16 >gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 202 Score = 301 bits (771), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 137/202 (67%), Positives = 168/202 (83%) Query: 1 MSTLLHIDSSARYTGSLTRQLSAAYAEQWQARNAGGKVVRRDLASQTLPHITEAMIGAYF 60 MSTLLHIDSSAR GS++RQL+A++ QWQA+N GGKVV RDLA+ LPH++E+M+GAYF Sbjct: 1 MSTLLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 Query: 61 TPADKRSAEQQAIIAESDKLVDELIAADTLVIGVPMYNFAPPSAFKAWVDHISRVGRTFL 120 TPAD RSAEQ +I +SD LVDEL+AADT+VIGVPMYNFAPPS KAW+DH+ R GRTF Sbjct: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 Query: 121 YGANGPTGLLSGKRAVVILSSGGVYSEGPAQPLDFNGTYIRSVLGFLGITDVELIAAEGV 180 Y GP GL++GK+AV+ILS GG+YSEGP + LDF G Y++S LGF+GITDVEL+ AEGV Sbjct: 121 YTETGPVGLVTGKKAVIILSRGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGV 180 Query: 181 SMGEEKARQTVSQAQEKISALV 202 SMGEE A+Q V+ A+ KI+A V Sbjct: 181 SMGEEAAKQAVASAEAKINASV 202 >gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 205 Score = 154 bits (388), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 1 MSTLLHIDSSARYTGSLTRQLSAAYAEQWQARNAGGKVVRRDLASQTLPHITEAMIGAYF 60 M+ +L I SS R SL+ + + AE +A +AG VR DL + LPHIT A I Sbjct: 1 MTHVLLITSSPRGADSLSSRFATEIAEGIKASSAGTLKVR-DLIADPLPHITSAYIQGRL 59 Query: 61 TPADKRSAEQQAIIAESDKLVDELIAADTLVIGVPMYNFAPPSAFKAWVDHISRVGRTFL 120 T + R+ +Q A +A + +LVDEL AAD +VIG M NF P S KAW DH++ TF Sbjct: 60 TAPENRTPDQVAAVALAQELVDELKAADIVVIGSGMINFGPSSQLKAWFDHVTWPSVTFA 119 Query: 121 YGANGPTGLLSGKRAVVILSSGGVYSEGPAQPLDFNGTYIRSVLGFLGITDVELIAAEGV 180 Y NGP GLL+GK+ ++ ++GGV+SEG DF Y+ +L F+G++DVE++ EG Sbjct: 120 YDDNGPKGLLTGKKTYLVAAAGGVFSEGIWAAFDFQSNYLLHLLSFIGLSDVEMVCVEGT 179 Query: 181 SMGEEKARQTVSQAQEKISALV 202 G + A+ ++ + + L+ Sbjct: 180 VFGPDAAKAAIANTEAAVQVLL 201 >gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 142 bits (358), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 3/201 (1%) Query: 4 LLHIDSSARYTGSLTRQLSAAYAEQWQARNAGGKVVRRDLASQTLPHITEAMIGAYFTP- 62 +LH+DSS S +R LSAA E+ + + +V RDLA+ + H+ + + P Sbjct: 3 ILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQPG 62 Query: 63 ADKRSAEQQAIIAESDKLVDELIAADTLVIGVPMYNFAPPSAFKAWVDHISRVGRTFLYG 122 A+ S E +A A S+ LV + + +D +V+GVPMYNF+ PS KAW+D +++ GRTF Y Sbjct: 63 ANHASPEVRAEQALSETLVSQFLNSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFRYT 122 Query: 123 ANGPTGLLSGKRAVVILSS-GGVYSEGPAQPLDFNGTYIRSVLGFLGITDVELIAAEGVS 181 NGP G LSG++AV+I S+ GG+YS GPA +D Y+++ GFLGI V + AE + Sbjct: 123 ENGPLG-LSGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERLI 181 Query: 182 MGEEKARQTVSQAQEKISALV 202 G E Q++ A +++ ++V Sbjct: 182 KGAELRSQSMRAALDEVPSVV 202 >gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 203 Score = 139 bits (350), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 109/182 (59%), Gaps = 2/182 (1%) Query: 4 LLHIDSSARYTGSLTRQLSAAYAEQWQARNAGGKVVRRDLASQTLPHITEAMIGAYFTPA 63 LLH+D+S S++RQLSA ++ +V+ RDLA+ H++ + A F A Sbjct: 3 LLHLDTSILGEHSVSRQLSADIVAHLRSLQPDLEVIYRDLAAAAPRHLSAEHLAA-FGGA 61 Query: 64 DKRSAEQQAIIAESDKLVDELIAADTLVIGVPMYNFAPPSAFKAWVDHISRVGRTFLYGA 123 + +A +A +DEL+ AD LVIG PMYNF+ PS KAW+D ++ G TF Y Sbjct: 62 EVDDPALRADLALGQACLDELLQADLLVIGAPMYNFSLPSQLKAWIDRVAVAGTTFAYTD 121 Query: 124 NGPTGLLSGKRAVVILSSGGVYSEGPAQ-PLDFNGTYIRSVLGFLGITDVELIAAEGVSM 182 GP GLL G+RA + GG Y+EG A+ LD Y+R +LGFLGI DV ++ AEGV+M Sbjct: 122 AGPEGLLKGRRAYIASVRGGQYAEGTAEAALDHQERYLRDLLGFLGIVDVSVVRAEGVAM 181 Query: 183 GE 184 G+ Sbjct: 182 GD 183 >gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 78.2 bits (191), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%) Query: 4 LLHIDSSARYTGSLTRQLSAAYAEQWQARNAGGKVVRRDLASQTLPHITEAMIGA---YF 60 +LHI+SS+R S + QL+ + + + A +V R DL S LP E +GA F Sbjct: 3 ILHINSSSRGADSRSLQLTEVFLRELEKHKAI-EVDRFDLFSGELPAFGELAVGAKMAMF 61 Query: 61 TPADKRSAEQQAIIAESDKLVDELIAADTLVIGVPMYNFAPPSAFKAWVDHISRVGRTFL 120 T A+ S EQ+ A + D +AD VI VP++N P K ++D +++ G F Sbjct: 62 TGAEATS-EQKHAWASIKAVFDRFASADAYVINVPLWNNGLPYVLKQFIDVVTQPGWAFG 120 Query: 121 YG-ANGPTGLLSGKRAVVILSSGGVYSEGPAQPL--DFNGTYIRSVLGFLGITDVEL 174 + NG +GLL ++A +I +S GVY G DF+ Y+ L F+GI + ++ Sbjct: 121 FDLENGYSGLLKNRKACIIHAS-GVYHPGIPTNFGSDFSTPYLTDWLKFVGIEEADI 176 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 632,764 Number of extensions: 26625 Number of successful extensions: 104 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 100 Number of HSP's successfully gapped: 5 Length of query: 202 Length of database: 1,619,870 Length adjustment: 81 Effective length of query: 121 Effective length of database: 1,236,335 Effective search space: 149596535 Effective search space used: 149596535 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)