BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0130.0011.p
         (280 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309994|ref|YP_003774086.1| tellurium resistance membrane p...   224   6e-60
gi|300309993|ref|YP_003774085.1| succinyl-CoA synthetase subunit...   123   2e-29

>gi|300309994|ref|YP_003774086.1| tellurium resistance membrane
           protein [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score =  224 bits (571), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 130/166 (78%), Positives = 153/166 (92%)

Query: 90  MDFLMELNWLAVGQIILIDILLGGDNAIVIALACRNLPDNLRLRGILWGTFGAIAIRIVL 149
           M+FL  LNW+AV QIILIDILLGGDNAIVIALACRNLPD LR++GI+WGT GAIAIRI L
Sbjct: 1   MEFLANLNWIAVVQIILIDILLGGDNAIVIALACRNLPDKLRMKGIVWGTVGAIAIRIAL 60

Query: 150 IAFAVTLLQMPFIKLVGGVLLFWIGTKLLSDDDGHGEISGSDKLLSAIKTIVVADLVMSL 209
           I+FAVT+LQ+P++KLVGGVLL WIG KLL++D+ H E+ GSD+L  A+KT++VADLVMSL
Sbjct: 61  ISFAVTMLQLPYLKLVGGVLLLWIGIKLLNEDEDHAEVDGSDRLWGAVKTVIVADLVMSL 120

Query: 210 DNVIAIASAAEQAAGEHQLLLVIFGILVSIPIIVWGSTLVLKLMEK 255
           DNVIAIASAAEQAAGEH+L+LV+FGI+VSIPIIVWGSTLVLKLME+
Sbjct: 121 DNVIAIASAAEQAAGEHRLMLVVFGIVVSIPIIVWGSTLVLKLMER 166


>gi|300309993|ref|YP_003774085.1| succinyl-CoA synthetase subunit
          alpha [Herbaspirillum seropedicae SmR1]
          Length = 293

 Score =  123 bits (309), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/57 (98%), Positives = 57/57 (100%)

Query: 1  MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNAFVAGVNPKKAGEDFEGIPIF 57
          MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNAFVAGVNPKKAGEDFEGIPI+
Sbjct: 1  MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNAFVAGVNPKKAGEDFEGIPIY 57


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.326    0.143    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 801,096
Number of extensions: 30620
Number of successful extensions: 134
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 2
Length of query: 280
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 196
Effective length of database: 1,222,130
Effective search space: 239537480
Effective search space used: 239537480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)