BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0128.0021.p
         (221 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312578|ref|YP_003776670.1| PHP family metal-dependent phos...   288   3e-79

>gi|300312578|ref|YP_003776670.1| PHP family metal-dependent
           phosphoesterase [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score =  288 bits (736), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/184 (78%), Positives = 160/184 (86%)

Query: 2   LNVDMHCHSNFSDGLLPPEEVAARAKANGVDVWALTDHDEVGGIAIARKAAQDLGLRYIP 61
           L  D+HCHSN SDGLLPPE+VAARAKANGV VWALTDHDE+ G+A AR AAQ LG+ ++ 
Sbjct: 6   LKFDLHCHSNVSDGLLPPEQVAARAKANGVGVWALTDHDEIDGVARARAAAQALGMVHVG 65

Query: 62  GVEISVTWAGQTVHIVGLRIDETNAALVQGLAATRNGRERRAREIAAQLAVAGIPDAFDG 121
           GVEISVTWAG TVHIVGL+IDETN ALVQGLAATRNGRERRAREIAAQL   G+  A++G
Sbjct: 66  GVEISVTWAGHTVHIVGLQIDETNPALVQGLAATRNGRERRAREIAAQLEQHGVAGAYEG 125

Query: 122 ALKHVGNPDLISRTHFARYIVETGRCADTKEVFRNYLCEGKPGYVPHRWATLRESVEWIC 181
           ALKHVGNPDLISRTHFAR++VE GRC DT+EVF NYL EGKPGYVPHRWATL E+V WI 
Sbjct: 126 ALKHVGNPDLISRTHFARFMVECGRCCDTREVFANYLTEGKPGYVPHRWATLEEAVRWIR 185

Query: 182 GAGG 185
           GAGG
Sbjct: 186 GAGG 189


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.135    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 779,690
Number of extensions: 32910
Number of successful extensions: 86
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 139
Effective length of database: 1,231,600
Effective search space: 171192400
Effective search space used: 171192400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)