BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0128.0020.p
         (171 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312579|ref|YP_003776671.1| hydrolase [Herbaspirillum serop...   166   1e-42
gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like est...    55   2e-09

>gi|300312579|ref|YP_003776671.1| hydrolase [Herbaspirillum
           seropedicae SmR1]
          Length = 300

 Score =  166 bits (419), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 91/115 (79%)

Query: 57  ERAGFLAAHWAGQNDEGNWEILGDPAHKNTNPLLYRIDEVTACWARISAPVLWVEAAETD 116
           ERA FLA HWA Q+D G W+ILGDPAHK  +P+LYR DE+ ACW RI+APVLW+EA ++D
Sbjct: 184 ERAAFLAQHWAQQDDSGLWQILGDPAHKQVSPILYRADEMMACWRRITAPVLWIEAIDSD 243

Query: 117 IWRWFGDNALMRAEIDRRIAFIPDVRTEIIPDAGHMLHHDQPELLAAAIERFLAE 171
           IWR+FG  +L R EIDRRIA IP V+ E+I DAGHMLHHDQPE LA  IE FL +
Sbjct: 244 IWRFFGPASLKREEIDRRIACIPRVQVEMIADAGHMLHHDQPEQLAQLIEAFLQQ 298


>gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like
           esterase [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score = 55.5 bits (132), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 33/44 (75%)

Query: 1   MHLVEANDLMSQLDVMSKLNTKTSFIHGLHDEGRQAAERWLEKN 44
           MH+++AN+LM QL  +SKLNT+ SFI  L  +GR+ A  WLE+N
Sbjct: 278 MHMIDANELMEQLTNLSKLNTQASFIGSLFQQGRERAAEWLEQN 321


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.135    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 579,158
Number of extensions: 24493
Number of successful extensions: 79
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 2
Length of query: 171
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 92
Effective length of database: 1,245,805
Effective search space: 114614060
Effective search space used: 114614060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)