BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0122.0014.p
         (319 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310758|ref|YP_003774850.1| UDP-N-acetylenolpyruvoylglucosa...   385   e-108

>gi|300310758|ref|YP_003774850.1|
           UDP-N-acetylenolpyruvoylglucosamine reductase
           [Herbaspirillum seropedicae SmR1]
          Length = 343

 Score =  385 bits (989), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/247 (76%), Positives = 209/247 (84%)

Query: 73  ENWHRFVQWTLDLGLGGLENLSLIPGSVGAAPIQNIGAYGIEVKDRFHSLTAFDFIDGKT 132
           ENWH FVQWTL  GLGGLENLSLIPGSVGAAPIQNIGAYGIEVKDRFHSL AFD   G+ 
Sbjct: 97  ENWHGFVQWTLAQGLGGLENLSLIPGSVGAAPIQNIGAYGIEVKDRFHSLRAFDLATGEI 156

Query: 133 FTLDNAACRFAYRDSVFKQELRDRAVVLDVTFGLPKQWQANMNYADVMQELSLRQITVPS 192
            TLD  ACRF YRDSVFK  LRDRAVVL+V+F LPK+WQAN NYADV Q L  R +T P 
Sbjct: 157 LTLDRDACRFGYRDSVFKHALRDRAVVLEVSFALPKRWQANANYADVAQALQERGVTEPG 216

Query: 193 PRDIADAVIAIRTRKLPDPAQIGNAGSFFKNPIVPAQQREALLAQHPQLVSYPQPDGGYK 252
           P DIA+AVIAIRTRKLPDPAQIGNAGSFFKNPIVPA+ R+ LLAQ+  LVSY   +G YK
Sbjct: 217 PGDIAEAVIAIRTRKLPDPAQIGNAGSFFKNPIVPARLRDTLLAQYADLVSYRVDEGHYK 276

Query: 253 LAAGWLIDQCGWKGRSLGAAGVYEKQALVLVNKGGASGKEIAALAQAIQADVQARFGVKL 312
           LAAGWLID+ GWKG+++G AGVYEKQALVLVN+GGA+G E+A LA+AIQ DV+ +FGV+L
Sbjct: 277 LAAGWLIDRSGWKGKTVGRAGVYEKQALVLVNRGGATGAEVARLAKAIQEDVKEKFGVQL 336

Query: 313 EPEPVFI 319
           EPEPVFI
Sbjct: 337 EPEPVFI 343


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,094,224
Number of extensions: 48360
Number of successful extensions: 117
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 117
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 234
Effective length of database: 1,217,395
Effective search space: 284870430
Effective search space used: 284870430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)