BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0116.0005.p (749 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310852|ref|YP_003774944.1| cation/multidrug efflux pump tr... 1092 0.0 gi|300311798|ref|YP_003775890.1| cation/multidrug efflux pump pr... 649 0.0 gi|300310853|ref|YP_003774945.1| cation/multidrug efflux pump pr... 602 e-173 gi|300309819|ref|YP_003773911.1| acriflavin resistance transmemb... 243 4e-65 gi|300313893|ref|YP_003777985.1| cation/multidrug efflux pump pr... 233 5e-62 >gi|300310852|ref|YP_003774944.1| cation/multidrug efflux pump transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1048 Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/654 (85%), Positives = 596/654 (91%), Gaps = 4/654 (0%) Query: 84 FVVDDAIVMIENISRYIEEGMAPLQAALKGAQQIGFTIISLTFSLIAVLIPLLFMGDVVG 143 FVVDDAIVMIENISRYIEEGM P+QAALKGA+QIGFTIISLTFSLIAVLIPLLFMGDVVG Sbjct: 398 FVVDDAIVMIENISRYIEEGMKPMQAALKGAEQIGFTIISLTFSLIAVLIPLLFMGDVVG 457 Query: 144 RLFHEFAVTLAVAILISAVVSLTLTPMMCARLLHHVPEEKQGWFYHKSGAFFDHVVARYG 203 RLFHEFAVTLAV+ILISAVVSLTLTPMMCARLL H PEE+QGWFYHKS FFD ++ARYG Sbjct: 458 RLFHEFAVTLAVSILISAVVSLTLTPMMCARLLRHQPEEQQGWFYHKSQQFFDRIIARYG 517 Query: 204 VALEWVLDRQRATLAVALGTLALTVVLYIFIPKGFFPVQDTGVIQGISEATQSVSFGAMA 263 V L+WVL RQ+ TL VA TL LTV+LY+F+PKGFFP+QDTGVIQGISEATQS+SF AM Sbjct: 518 VMLQWVLARQKLTLLVAAATLGLTVLLYVFVPKGFFPLQDTGVIQGISEATQSISFSAMG 577 Query: 264 ERQQALAKVVLEDPAVESLSSFIGVDGINATLNSGRMLINLKPHESRDGGERISASDIIR 323 E+QQ LAKVVL+DPAVESL+SFIGVDG NATLNSGRMLINLKPH+ R+ +SA+D+IR Sbjct: 578 EKQQQLAKVVLQDPAVESLTSFIGVDGTNATLNSGRMLINLKPHDVRE----VSATDVIR 633 Query: 324 RLQPRLAEKVPGITLYMQPVQDLTIEDSVSRTQYQFTLEDADPAELSTWVPKIVERLRQL 383 RLQ +LA +VPGITLYMQPVQDLTIEDSVSRTQYQFTLEDADPA LSTWVPK++ RL+Q Sbjct: 634 RLQGKLAAEVPGITLYMQPVQDLTIEDSVSRTQYQFTLEDADPAVLSTWVPKLIARLQQQ 693 Query: 384 PELADVASNVQDQGLQAYVEIDRDAASRMGITTAAIDNALYNAFGQRLISTIYTQSNQYR 443 ELADVA+N+QDQGLQAY+EIDR+AASR+GITTAAIDNALYNAFGQRLISTIYTQSNQYR Sbjct: 694 SELADVATNLQDQGLQAYIEIDRNAASRLGITTAAIDNALYNAFGQRLISTIYTQSNQYR 753 Query: 444 VVMEVKPEFQKGPDALNSIFLVASNGNQIPLASIAKVTERTAPLVVNHLGQFPAATVSFN 503 VVMEVKPEFQ GP AL+SI+LV S G ++PL+SIA VTERTAPLVVNH+GQFPAATVSFN Sbjct: 754 VVMEVKPEFQHGPAALDSIYLVTSGGGKVPLSSIATVTERTAPLVVNHIGQFPAATVSFN 813 Query: 504 LAQGASLGEAVKAIMAAEKEIAMPASISTNFQGAALAFQASLSNTLWLILAAIVTMYIVL 563 LA+GASLGEAVKAI AAE+EI MPAS TNFQGAALAFQASLSNTLWLILAAIVTMYIVL Sbjct: 814 LAKGASLGEAVKAIKAAEEEIGMPASTVTNFQGAALAFQASLSNTLWLILAAIVTMYIVL 873 Query: 564 GVLYESYIHPITILSTLPSAGVGALLSLMISRNDLGIIGIIGIILLIGIVKKNAIMMIDF 623 GVLYESYIHPITILSTLPSAGVGALLSLMIS DLGIIGIIGIILLIGIVKKNAIMMIDF Sbjct: 874 GVLYESYIHPITILSTLPSAGVGALLSLMISGTDLGIIGIIGIILLIGIVKKNAIMMIDF 933 Query: 624 ALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGTGVGSELRQPLGITMV 683 ALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGTGVGSELRQPLGITMV Sbjct: 934 ALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGTGVGSELRQPLGITMV 993 Query: 684 GGLLVSQVLTLFTTPVIYLGFDSLARRLRKRFGKEEHSDDDDAPSANAPLLPPA 737 GGLLVSQVLTLFTTPVIYLGFDSL RRLR RFG+ LPPA Sbjct: 994 GGLLVSQVLTLFTTPVIYLGFDSLGRRLRARFGQRAPGPGGGDDEGKPAALPPA 1047 Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/86 (88%), Positives = 81/86 (94%) Query: 1 VITLQFNLDLSLDIAEQEVQAAINAGGNLLPSDLPAPPIYSKVNPADTPILTLAVTSKTL 60 VITLQFNLDLSLDIAEQEVQAAINAG NLLPSDLP PP+YSKVNPADTPI+TLAVTS T+ Sbjct: 90 VITLQFNLDLSLDIAEQEVQAAINAGSNLLPSDLPMPPVYSKVNPADTPIITLAVTSNTM 149 Query: 61 PLPKVQDLIDTRLAQKISQLSGXFVV 86 PLPKVQDLIDTR+AQKISQLSG +V Sbjct: 150 PLPKVQDLIDTRIAQKISQLSGVGLV 175 >gi|300311798|ref|YP_003775890.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1051 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/624 (54%), Positives = 443/624 (70%), Gaps = 10/624 (1%) Query: 84 FVVDDAIVMIENISRYIEEGMAPLQAALKGAQQIGFTIISLTFSLIAVLIPLLFMGDVVG 143 FVVDDAIVM+ENI RY+EEGM PL+AALKGA +IGFTIIS++ SL+AV IPLL MG +VG Sbjct: 410 FVVDDAIVMLENIYRYVEEGMTPLEAALKGAGEIGFTIISISVSLVAVFIPLLLMGGIVG 469 Query: 144 RLFHEFAVTLAVAILISAVVSLTLTPMMCARLLHHVPEEKQGWFYHKSGAFFDHVVARYG 203 RLF EFAVT+ + I +S ++SLTLTPM+C+R L + ++ G Y FD ++A Y Sbjct: 470 RLFREFAVTVTLTIAVSVIISLTLTPMLCSRFLKNEHGQRHGKLYQWFERCFDAMLAGYK 529 Query: 204 VALEWVLDRQRATLAVALGTLALTVVLYIFIPKGFFPVQDTGVIQGISEATQSVSFGAMA 263 L+ V+ Q TL + TLALT VL+IFIPKGFFP QD GVI G +E+ Q S AM Sbjct: 530 RGLDVVMKHQFITLMSFIATLALTAVLFIFIPKGFFPQQDNGVIVGFAESAQDTSSAAMH 589 Query: 264 ERQQALAKVVLEDPAVESLSSFIGVDGINATLNSGRMLINLKPHESRDGGERISASDIIR 323 ER +A+VV +DP V + G + T N+G+ I LKP +D G +A +II Sbjct: 590 ERLLKVAEVVRQDPDVIGFAMSAG----STTFNTGQFFIALKP---KDQGRTTNADEIIA 642 Query: 324 RLQPRLAEKVPGITLYMQPVQDLTIEDSVSRTQYQFTLEDADPAELSTWVPKIVERLRQL 383 RL+P++A ++ G+ L+MQ QD+ + +SRTQYQ+T+ D D EL+ W P+++ER RQL Sbjct: 643 RLRPKVA-RIEGVNLFMQASQDINVGGRLSRTQYQYTITDTDLDELNVWAPRMLERFRQL 701 Query: 384 PELADVASNVQDQGLQAYVEIDRDAASRMGITTAAIDNALYNAFGQRLISTIYTQSNQYR 443 P+L DVAS+ Q+Q A + IDR AS GI+ + ID +Y+A GQR ++ +TQ N YR Sbjct: 702 PQLTDVASDQQNQAAAAVITIDRARASSFGISPSLIDATIYDAIGQRQVAQYFTQINSYR 761 Query: 444 VVMEVKPEFQKGPDALNSIFLVAS-NGNQIPLASIAKV-TERTAPLVVNHLGQFPAATVS 501 V++EV P QK P + ++L + G Q+PL++ K+ T +T+ L ++H QFPA T+S Sbjct: 762 VILEVTPALQKDPALFDKLYLTSPLTGQQVPLSTFVKIDTSKTSYLSISHQSQFPAVTIS 821 Query: 502 FNLAQGASLGEAVKAIMAAEKEIAMPASISTNFQGAALAFQASLSNTLWLILAAIVTMYI 561 FNLA+G SLGEAV I + ++ +P ++ NFQG A AF SLS+ +LI AA++ +YI Sbjct: 822 FNLAKGVSLGEAVDVIQKTKDQMGVPQTLVGNFQGTAKAFGDSLSSQPYLIAAALIAVYI 881 Query: 562 VLGVLYESYIHPITILSTLPSAGVGALLSLMISRNDLGIIGIIGIILLIGIVKKNAIMMI 621 VLG+LYESYIHP+TILSTLPSAGVGALL LM DL +I +IGIILLIGIVKKN IMMI Sbjct: 882 VLGLLYESYIHPLTILSTLPSAGVGALLILMAGGYDLSVIALIGIILLIGIVKKNGIMMI 941 Query: 622 DFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGTGVGSELRQPLGIT 681 DFAL AER +G P +AIYQACLLRFRPI+MTTM ALL LPLMLG G GSELR+PLG Sbjct: 942 DFALTAERSQGMKPEQAIYQACLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYA 1001 Query: 682 MVGGLLVSQVLTLFTTPVIYLGFD 705 MVGGL++SQ LTLFTTPV+YL D Sbjct: 1002 MVGGLILSQALTLFTTPVVYLYLD 1025 Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 63/86 (73%) Query: 2 ITLQFNLDLSLDIAEQEVQAAINAGGNLLPSDLPAPPIYSKVNPADTPILTLAVTSKTLP 61 ITLQF+L+ ++D A +VQAAINA LP++LP PP + K+NPAD+PI+ ++V S+ LP Sbjct: 91 ITLQFDLNRNIDAAALDVQAAINASTGQLPANLPNPPTFRKINPADSPIMIMSVQSEALP 150 Query: 62 LPKVQDLIDTRLAQKISQLSGXFVVD 87 L V D D LAQ+ISQ+SG +V+ Sbjct: 151 LTVVNDYADNILAQQISQISGVGLVN 176 >gi|300310853|ref|YP_003774945.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1078 Score = 602 bits (1553), Expect = e-173, Method: Compositional matrix adjust. Identities = 329/690 (47%), Positives = 443/690 (64%), Gaps = 56/690 (8%) Query: 84 FVVDDAIVMIENISRYIEEGMAPLQAALKGAQQIGFTIISLTFSLIAVLIPLLFMGDVVG 143 FVVDDAIV++ENISR+IE GM P +AAL GA+++GFT++S++ SLIAV IP+L M +VG Sbjct: 398 FVVDDAIVVLENISRHIESGMKPYKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVG 457 Query: 144 RLFHEFAVTLAVAILISAVVSLTLTPMMCARLLHHVP-------EEKQGWFYH---KSGA 193 RLF EFA+TL+VAIL+S VVSLT TPMMCA+LL H P + + W +S A Sbjct: 458 RLFREFAITLSVAILVSLVVSLTTTPMMCAQLLRHDPAADEARRQRRHPWLQKIADQSAA 517 Query: 194 FFDHVVARYGVALEWVLDRQRATLAVALGTLALTVVLYIFIPKGFFPVQDTGVIQGISEA 253 F+ ++ Y L W L + + L T+AL V LY IPKGFFP QDTG + G Sbjct: 518 IFEDMLLAYQRTLAWALRAAPLMMLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRG 577 Query: 254 TQSVSFGAMAERQQALAKVVLEDPAVESLSSFIGVDGINATLNSGRMLINLKPHESRDGG 313 Q++SF AM + +V DPAV + +F G N G M + LKP R Sbjct: 578 DQAISFQAMRTKLNEFIDIVRADPAVSDVVAFTG----GQRRNGGFMYVTLKPLSER--- 630 Query: 314 ERISASDIIRRLQPRLAEKVPGITLYMQPVQDLTIEDSVSRTQYQFTLEDADPAELSTWV 373 + SA ++ RL+ + A KV G +++ PVQD+ I S +QY+++L+ D L W Sbjct: 631 -KDSADKVVARLRIKTA-KVAGARVFLVPVQDIRIGARQSDSQYEYSLKSDDVGLLRIWE 688 Query: 374 PKIVERLRQLPELADVASNVQDQGLQAYVEIDRDAASRMGITTAAIDNALYNAFGQRLIS 433 PKI L L EL D++++ QD GLQ + IDR+ A R G+T ID+ L + FGQR IS Sbjct: 689 PKIRLALSNLKELEDISTDQQDNGLQTTLTIDRETAMRAGVTPQLIDSTLSDLFGQRQIS 748 Query: 434 TIYTQSNQYRVVMEVKPEFQKGPDALNSIF---------------------LVAS---NG 469 TIY+ NQY VVME P++ + P+ L + L AS N Sbjct: 749 TIYSGMNQYHVVMEAAPQYWQSPETLRDTYVSLAGSSNLSPTTSSLSTPPALSASGKLNA 808 Query: 470 N-------------QIPLASIAKVTERTAPLVVNHLGQFPAATVSFNLAQGASLGEAVKA 516 N QIPLA+ ++ T L V+H GQF A+T+SFNLA+G SL +A A Sbjct: 809 NTGLAQTISTAPSRQIPLAAFSRFEPTTTSLSVSHEGQFVASTLSFNLAEGVSLSQATAA 868 Query: 517 IMAAEKEIAMPASISTNFQGAALAFQASLSNTLWLILAAIVTMYIVLGVLYESYIHPITI 576 I A ++ +P ++ F G A AFQ+S S+ LIL A++ +YIVLG+LYES IHPITI Sbjct: 869 IDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQPLLILTALLAVYIVLGILYESLIHPITI 928 Query: 577 LSTLPSAGVGALLSLMISRNDLGIIGIIGIILLIGIVKKNAIMMIDFALEAERHEGKSPR 636 +STLPSAGVGALL+LM++ D +I +IG+ILLIGIVKKNAIMM+DFA++AER+ G SPR Sbjct: 929 ISTLPSAGVGALLALMVTGTDFSLIALIGVILLIGIVKKNAIMMVDFAIDAERNRGMSPR 988 Query: 637 EAIYQACLLRFRPILMTTMAALLGALPLMLGTGVGSELRQPLGITMVGGLLVSQVLTLFT 696 +AI++AC LRFRPI+MTTMAALLGA+PL +G G G+ELRQPLGI++VGGL+VSQ+LTL+T Sbjct: 989 DAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAELRQPLGISIVGGLVVSQLLTLYT 1048 Query: 697 TPVIYLGFDSLARRLRKRFGKEEHSDDDDA 726 TPV+YL + L+ ++RFG++ ++ A Sbjct: 1049 TPVVYLYMERLSSWSKRRFGRKNKTETSAA 1078 Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 43/81 (53%), Positives = 59/81 (72%) Query: 2 ITLQFNLDLSLDIAEQEVQAAINAGGNLLPSDLPAPPIYSKVNPADTPILTLAVTSKTLP 61 ITLQF+L +D A ++VQAA+NA NLLP+ +P+ P Y KVNPAD PIL LA+TS T+ Sbjct: 91 ITLQFDLSRDIDGAARDVQAALNAARNLLPTGMPSNPTYRKVNPADAPILILAMTSDTMT 150 Query: 62 LPKVQDLIDTRLAQKISQLSG 82 ++ D D+ +AQK+SQ+ G Sbjct: 151 QGQMYDAADSIVAQKLSQVRG 171 >gi|300309819|ref|YP_003773911.1| acriflavin resistance transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1048 Score = 243 bits (620), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 183/665 (27%), Positives = 337/665 (50%), Gaps = 41/665 (6%) Query: 85 VVDDAIVMIENISRYI-EEGMAPLQAALKGAQQIGFTIISLTFSLIAVLIPLLFMGDVVG 143 +VDDAIV++EN+ R + EEG++P A K QI +I +T LIAV IP+ F G VG Sbjct: 405 LVDDAIVVVENVERIMSEEGLSPADATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVG 464 Query: 144 RLFHEFAVTLAVAILISAVVSLTLTPMMCARLL-------HHVPEEKQGWFYHKSGAFFD 196 ++ +F++++ +++ S +++ TLTP +CA +L HH + GWF K F+ Sbjct: 465 AIYRQFSLSMVASMVFSVLMAFTLTPALCATILKPVEKGHHHEKKGFFGWFNRK----FN 520 Query: 197 HVVARYGVALEWVLDRQRATLAVALGTLALTVVLYIFIPKGFFPVQDTGVIQGISEATQS 256 + Y + +L++ + V + +A +LY+ +P F P +D G I I+ Sbjct: 521 STASGYQGIIGGMLNKAGRYMIVYVLIVACVGLLYVRLPASFLPNEDQGYI--ITNV--Q 576 Query: 257 VSFGAMAERQQALAKVV----LEDPAVESLSSFIGVDGINATLNSGRMLINLKPHESRDG 312 + GA R A+ K + L+DPAVE + +G N+ + LK RD Sbjct: 577 LPPGASTSRTTAVVKQIEEYYLKDPAVEHAIAVLGYSFSGNGQNAALVFTPLKDWSQRDK 636 Query: 313 GERISASDIIRRLQPRLAEKVPGITLYMQPVQDLTIEDSVSRTQYQFTLEDADPAELS-T 371 + SA I + ++ I P+ I + + T + F L+D A L T Sbjct: 637 SQ--SADAIAGKAFGAFSQIKDAIVF---PLNPPPIPELGNATGFTFRLQDR--AGLGHT 689 Query: 372 WVPKIVERLRQLPELADVASNVQDQGL----QAYVEIDRDAASRMGITTAAIDNALYNAF 427 + + ++ + + V + V+ +GL Q ++IDRD A+ +G+ + I++ L A Sbjct: 690 ALVQARNQILGMASQSKVLAGVRPEGLEDAPQLQLDIDRDKANALGVPFSTINSVLSTAL 749 Query: 428 GQRLISTIYTQSNQYRVVMEVKPEFQKGPDALNSIFLVASNGNQIPLASIAKVTERTAPL 487 G ++ Q RV+++ + + P+ L +++ S+G +P ++ P+ Sbjct: 750 GSSYVNDFPNLGRQQRVIVQADAKRRLQPEDLTNLYARNSSGTMVPFSAFVTAKWINGPV 809 Query: 488 VVNHLGQFPAATVSFNLAQGASLGEAVKAIMAAEKEIA-MPASISTNFQGAALAFQASLS 546 + +PA ++ A G S GEA+ + E +A +P + G +L + S + Sbjct: 810 QLIRYNGYPAMKIAGGAAPGRSTGEAMAEM---ESFVAKLPPGFGFEWTGQSLEEKTSGN 866 Query: 547 NTLWLILAAIVTMYIVLGVLYESYIHPITILSTLPSAGVGALLSLMISRNDLGIIGIIGI 606 L +++ +++VL LYES P+ ++ +P +GALL + + + +G+ Sbjct: 867 QAPALYALSLIAVFLVLAALYESTSIPLAVMLVVPLGILGALLGVTLRAMPNDVYFKVGM 926 Query: 607 ILLIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLML 666 I ++G+ KNAI++I+FA + + +GK EA +A LRFRPI+MT++A +LG LPL + Sbjct: 927 IAVVGLSAKNAILIIEFAKDLQ-AQGKGLIEATLEAVHLRFRPIIMTSLAFILGVLPLAI 985 Query: 667 GTGVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFDSLARRLRKRFGKEEHSDDDDA 726 +G GS ++ +G ++GG++ + VL +F P+ ++ + R++ K ++ D + + Sbjct: 986 ASGAGSASQRAIGTGVMGGMITATVLAVFLVPIFFV----VVRKIFKGSERQRKFDAEHS 1041 Query: 727 PSANA 731 P N+ Sbjct: 1042 PKINS 1046 >gi|300313893|ref|YP_003777985.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1051 Score = 233 bits (594), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 193/665 (29%), Positives = 323/665 (48%), Gaps = 47/665 (7%) Query: 84 FVVDDAIVMIENISRYI-EEGMAPLQAALKGAQQIGFTIISLTFSLIAVLIPLLFMGDVV 142 +VDDAIV++EN+ R + EE ++P +A K Q+I ++ + L AV IP+ F G Sbjct: 406 LLVDDAIVVVENVERLMSEEKLSPKEATRKSMQEITGALVGIAMVLSAVFIPMAFFGGST 465 Query: 143 GRLFHEFAVTLAVAILISAVVSLTLTPMMCARLL--HHVPEEKQGWFYHKSGAFFDHVVA 200 G ++ +F++T+ A+ +S +V+LTLTP +CA LL H +QG F+ FD Sbjct: 466 GVIYRQFSITIVSAMALSVMVALTLTPALCATLLKPHAGGHVQQGRFFTWFNRSFDRSAT 525 Query: 201 RYGVALEWVLDR-QRATLAVALGTLALTVVLYIFIPKGFFPVQDTGVIQGISEATQSVSF 259 RY + +L R +R L AL +A+ VL++ +P F P +D GV+ A + Sbjct: 526 RYQGGVAGLLKRGKRGLLMYALIAVAMA-VLFMRLPTSFLPEEDQGVLM----AQIQLPT 580 Query: 260 GAMAERQQALAKVVLE-----DPAVESLSSFIGVDGINATLNSGRMLINLKPHESRDGGE 314 GA AE+ + K V E +VES+ + +G + N R I LK E R G Sbjct: 581 GATAEQTATVVKTVQEYFMNKPESVESVLAIVGAGVGGNSQNGARAFIRLKDWEQRTGAG 640 Query: 315 RISASDIIRRLQPRLAEKVPGITLY-MQPVQ----------DLTIEDSVSRTQYQFTLED 363 + SAS+++RR L+ K+ G ++ M P DL ++D V + L+ Sbjct: 641 Q-SASELVRRANADLS-KIRGARVFLMNPPAVRGLGQSSGFDLELKD-VGGVGHDALLQA 697 Query: 364 ADPAELSTWVPKIVERLRQLPELADVASNVQDQGLQAYVEIDRDAASRMGITTAAIDNAL 423 D + ++ R LA+V + D Q V ID A + I T+ I+ L Sbjct: 698 RD---------QFLQLARSNALLANVRTTGLDDTPQLRVAIDDRKADALSIATSDINATL 748 Query: 424 YNAFGQRLISTIYTQSNQYRVVMEVKPEFQKGPDALNSIFLVASNGNQIPLASIAKVTER 483 A G ++ + +V ++ F+ D LN ++ + +P A+ Sbjct: 749 ATAMGGTYVNDFLSNGRVKKVYVQGDSAFRMQADDLNRWYVRNAASQMVPFAAFMSSQWT 808 Query: 484 TAPLVVNHLGQFPAATVSFNLAQGASLGEAVKAIMAAEKEIA-MPASISTNFQGAALAFQ 542 P ++ + + A G S G A+ + EK +A +PA I + G++ + Sbjct: 809 YGPSLLERYNGVSSFEIVGEPAAGVSSGTAMAEV---EKLVAQLPAGIGFEWTGSSYQER 865 Query: 543 ASLSNTLWLILAAIVTMYIVLGVLYESYIHPITILSTLPSAGVGALLSLMISRNDLGIIG 602 S + L +I+ +++ L LYES+ P ++ +P +G +L I + Sbjct: 866 LSGNQAPMLYAISILFVFLCLAALYESWSVPFAVILAVPLGIIGTVLLTGIFGMSNDVYF 925 Query: 603 IIGIILLIGIVKKNAIMMIDFALEAERHE-GKSPREAIYQACLLRFRPILMTTMAALLGA 661 +G++ +G+ KNAI++++FA + HE GKS EA +A LR RPILMT++A + G Sbjct: 926 QVGLLTTVGLSAKNAILIVEFA--KQLHESGKSLWEATLEAVQLRLRPILMTSLAFMFGV 983 Query: 662 LPLMLGTGVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFDSLARRLRKRFGKEEHS 721 LPL + +G GS R+ +G ++GG+L + +L +F P+ Y + L +R ++ Sbjct: 984 LPLAVASGAGSASRRAIGTGVLGGMLSATLLGIFFVPLFYY---LIGAWLDRRAARKPRQ 1040 Query: 722 DDDDA 726 DDD A Sbjct: 1041 DDDHA 1045 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.136 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,924,380 Number of extensions: 73624 Number of successful extensions: 397 Number of sequences better than 1.0e-08: 11 Number of HSP's gapped: 346 Number of HSP's successfully gapped: 16 Length of query: 749 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 657 Effective length of database: 1,184,250 Effective search space: 778052250 Effective search space used: 778052250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)