BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0105.0010.p
         (147 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313410|ref|YP_003777502.1| carbonic anhydrase/acetyltransf...   265   1e-72
gi|300311056|ref|YP_003775148.1| carbonic anhydrase/acetyltransf...    92   2e-20
gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily ca...    62   2e-11

>gi|300313410|ref|YP_003777502.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 200

 Score =  265 bits (676), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 125/147 (85%), Positives = 138/147 (93%)

Query: 1   MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCYIGPAACLRGDFGRIVMHRGSNVQD 60
           MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCY+GP ACLRGDFGRIV+ RG+NVQD
Sbjct: 1   MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCYVGPTACLRGDFGRIVLQRGANVQD 60

Query: 61  TCVVHGFPAHDTVIEENGHIGHGAVLHSCVVRRDALVGMNAVVMDDAEVGEEAIVAASAF 120
           TCV+HGFP HDTV+EENGHIGHGAVLHSC VRRDALVGMNAVVMD+A VGE+AIVAA AF
Sbjct: 61  TCVIHGFPGHDTVVEENGHIGHGAVLHSCTVRRDALVGMNAVVMDEAVVGEQAIVAACAF 120

Query: 121 VRAGMKVPPRSLAAGVPAKILREXPKD 147
           VRAGM++PPR+LAAG+PAK++RE   D
Sbjct: 121 VRAGMQIPPRTLAAGLPAKVVRELTAD 147


>gi|300311056|ref|YP_003775148.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 174

 Score = 91.7 bits (226), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 81/147 (55%)

Query: 1   MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCYIGPAACLRGDFGRIVMHRGSNVQD 60
           M  Y +E  IP +  +A+V  ++ ++G V +     +     +RGD   I +   SNVQ+
Sbjct: 1   MAIYQLEQDIPEIHDTAFVAESSTVVGKVKMEAHSSVWFNVAIRGDNELITIGENSNVQE 60

Query: 61  TCVVHGFPAHDTVIEENGHIGHGAVLHSCVVRRDALVGMNAVVMDDAEVGEEAIVAASAF 120
             V+H    +  VI +N  +GH A+LH C +   AL+G+ AVV++ A++G+  +V A A 
Sbjct: 61  GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGAKIGKNCLVGAGAL 120

Query: 121 VRAGMKVPPRSLAAGVPAKILREXPKD 147
           V  G + P  SL  G PAK +R+  ++
Sbjct: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEE 147


>gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily
           carbonic anhydrase/acetyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 186

 Score = 62.0 bits (149), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 10/127 (7%)

Query: 11  PVVDPSAYVHPTAVLIGDVIVGPDCYIGPAACLR-------GDFGRIVMHRGSNVQDTCV 63
           P V  SAYV  TA+L G VIV  + +IGP A +R       G+   I++   SN+QD  V
Sbjct: 11  PQVHESAYVDHTAILCGKVIVHENVFIGPYAVIRADEVDEHGEMEPIIIGAHSNIQDGVV 70

Query: 64  VHGFPAHDTVIEENGHIGHGAVLHS-CVVRRDALVGMNAVVMDDAEVGEEAIVAASAFVR 122
           +H        I E   I H A++H  C V  DA +G N+V+  +  +G   +V  +A V 
Sbjct: 71  IHSKSGAAVTIGERTSIAHRAIVHGPCTVGDDAFIGFNSVLF-NCSIGAGCVVRHNAVVD 129

Query: 123 AGMKVPP 129
            G  +PP
Sbjct: 130 -GCDLPP 135


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.140    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 518,905
Number of extensions: 21861
Number of successful extensions: 77
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 3
Length of query: 147
Length of database: 1,619,870
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,255,275
Effective search space: 87869250
Effective search space used: 87869250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)