BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0102.0058.p (155 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311338|ref|YP_003775430.1| chemotaxis-specific methylester... 260 4e-71 gi|300309961|ref|YP_003774053.1| chemotaxis-specific methylester... 126 7e-31 gi|300312321|ref|YP_003776413.1| protein-glutamate methylesteras... 84 4e-18 gi|300311029|ref|YP_003775121.1| protein-glutamate methylesteras... 75 2e-15 gi|300312675|ref|YP_003776767.1| protein-glutamate methylesteras... 68 3e-13 >gi|300311338|ref|YP_003775430.1| chemotaxis-specific methylesterase [Herbaspirillum seropedicae SmR1] Length = 359 Score = 260 bits (664), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 124/133 (93%), Positives = 127/133 (95%) Query: 23 RAIAGHAYIAPGHSHLKLVRSGANYMTQLDQGPPVNRHRPSVDVLFNSAAACAGKNAVGV 82 R + GHAYIAPGHSHLKLVRSGANYMTQLDQGPPVNRHRPSVDVLF SAA CAGKNAVGV Sbjct: 227 RVLPGHAYIAPGHSHLKLVRSGANYMTQLDQGPPVNRHRPSVDVLFQSAATCAGKNAVGV 286 Query: 83 ILTGMGKDGALGMLEMRNAGAYNFAQDEASCVVFGMPREAIAVGGAHEVLALQAMPGRVL 142 ILTGMGKDGA GMLEMRNAGAYNFAQDEASCVVFGMPREAIAVG AHEVLALQAMPGRVL Sbjct: 287 ILTGMGKDGAQGMLEMRNAGAYNFAQDEASCVVFGMPREAIAVGAAHEVLALQAMPGRVL 346 Query: 143 SYLAEHGSRALRV 155 ++LAEHGSRALRV Sbjct: 347 AWLAEHGSRALRV 359 >gi|300309961|ref|YP_003774053.1| chemotaxis-specific methylesterase [Herbaspirillum seropedicae SmR1] Length = 381 Score = 126 bits (317), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 79/122 (64%) Query: 23 RAIAGHAYIAPGHSHLKLVRSGANYMTQLDQGPPVNRHRPSVDVLFNSAAACAGKNAVGV 82 R + G IAPG HL + R G Y + GP V+RH+PSVDVLF S A AG NAVG+ Sbjct: 257 RILPGRVLIAPGGRHLVVRREGLQYYVETLDGPLVSRHKPSVDVLFRSLAKAAGSNAVGI 316 Query: 83 ILTGMGKDGALGMLEMRNAGAYNFAQDEASCVVFGMPREAIAVGGAHEVLALQAMPGRVL 142 I+TGMG DGA GM E+ + G +AQDEAS VVFGMP+EAI GG +V+ L+ + + Sbjct: 317 IMTGMGDDGARGMRELADCGGATYAQDEASSVVFGMPKEAIQQGGVGDVITLEHISAVIE 376 Query: 143 SY 144 Y Sbjct: 377 QY 378 >gi|300312321|ref|YP_003776413.1| protein-glutamate methylesterase [Herbaspirillum seropedicae SmR1] Length = 342 Score = 84.3 bits (207), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 60/93 (64%) Query: 53 QGPPVNRHRPSVDVLFNSAAACAGKNAVGVILTGMGKDGALGMLEMRNAGAYNFAQDEAS 112 +G P + +RPSVDV F S G++LTGMG+DGA G+ +R++GA+ AQD+ S Sbjct: 249 EGAPNDVYRPSVDVFFQSIVRHWPGKVAGLLLTGMGRDGAAGLKALRDSGAHTMAQDQKS 308 Query: 113 CVVFGMPREAIAVGGAHEVLALQAMPGRVLSYL 145 C V+GMP+ A+A+ A EVL + M R+ + + Sbjct: 309 CAVYGMPKAAVALNAAVEVLPVTGMAARLQAII 341 >gi|300311029|ref|YP_003775121.1| protein-glutamate methylesterase [Herbaspirillum seropedicae SmR1] Length = 353 Score = 75.5 bits (184), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 1/122 (0%) Query: 27 GHAYIAPGHSHLKLVRSGANYMTQLDQGPPVNRHRPSVDVLFNSA-AACAGKNAVGVILT 85 GH YIA G + + + + G++ P + PSV++L SA + A + +GV+LT Sbjct: 232 GHVYIARGGADMLVAKRGSHLSVLPKPESPTHLWHPSVELLARSALQSMAARQLIGVMLT 291 Query: 86 GMGKDGALGMLEMRNAGAYNFAQDEASCVVFGMPREAIAVGGAHEVLALQAMPGRVLSYL 145 GMG DGA E+ G A+ E+SCVVFGMP++ I GGA VL + ++ +L Sbjct: 292 GMGNDGAAAFAEICGDGGRTIAESESSCVVFGMPKDLIDRGGASVVLPASKIATQLRVWL 351 Query: 146 AE 147 + Sbjct: 352 EQ 353 >gi|300312675|ref|YP_003776767.1| protein-glutamate methylesterase [Herbaspirillum seropedicae SmR1] Length = 211 Score = 68.2 bits (165), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 59/120 (49%) Query: 18 ATCRTRAIAGHAYIAPGHSHLKLVRSGANYMTQLDQGPPVNRHRPSVDVLFNSAAACAGK 77 A + A AG + AP HL + RS + + VN RP++DVLF SAA G Sbjct: 73 AQDKEPAQAGVIHFAPPDYHLLVDRSEDGPILAMSNDELVNYSRPAIDVLFESAADVYGP 132 Query: 78 NAVGVILTGMGKDGALGMLEMRNAGAYNFAQDEASCVVFGMPREAIAVGGAHEVLALQAM 137 +G++LTG DGA GM + AG Q V MP +A+A+G VL LQ + Sbjct: 133 RLLGILLTGGNHDGAAGMQAIARAGGVTVVQSPQQAQVPYMPAQALAMGNIDYVLTLQQI 192 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 521,322 Number of extensions: 21543 Number of successful extensions: 59 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 5 Length of query: 155 Length of database: 1,619,870 Length adjustment: 78 Effective length of query: 77 Effective length of database: 1,250,540 Effective search space: 96291580 Effective search space used: 96291580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 126 (53.1 bits)