BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0092.0019.p
         (314 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309878|ref|YP_003773970.1| 2-polyprenyl-6-methoxyphenol hy...    68   1e-12
gi|300310882|ref|YP_003774974.1| 2-polyprenyl-6-methoxyphenol hy...    66   3e-12
gi|300313232|ref|YP_003777324.1| 3-(3-hydroxyphenyl) propionate ...    63   3e-11

>gi|300309878|ref|YP_003773970.1| 2-polyprenyl-6-methoxyphenol
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 589

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 28/206 (13%)

Query: 4   HEVLIIGAGPTGMVLALWLNKFGVRVRILDKAAAPGTASRALVVQARTLELYRQLDLADA 63
           H V+IIGAGP G+  A+ L + G+ V ++D      T SRA+    RTL+++ ++     
Sbjct: 31  HPVVIIGAGPVGLACAIDLARQGIAVVLVDDDDTLSTGSRAICFAKRTLDIFDRIGCGQR 90

Query: 64  VLAEGHRAQAFNLWTEGEHRAHVQLGAIGEGLTPYPFLQIFPQDRHEKLLAERLQ---VA 120
           ++ +G        W  G  +  ++  A+ E         + P+  H +     LQ   V 
Sbjct: 91  MVDKGVG------WNRG--KVFLRDQAVYE-------FDLLPESGHARPAFINLQQYYVE 135

Query: 121 GIAIERGIDF----IDYSDAGSHI------KARYLDTEGRAQTCEALYIVGCDGAHSMVR 170
           G  +E+   +    I + +  S I      +A  +DT   + T +A Y+V  DG+ S +R
Sbjct: 136 GYLLEQAQQWPHIEIRWKNKVSAIAHHEDHEALTVDTPQGSYTLKARYVVAADGSRSPLR 195

Query: 171 KSLGADFSGGTYRQLFYVADIEGSGP 196
           K +G +  G T+R  F +AD++   P
Sbjct: 196 KMMGLESQGHTFRDRFLIADVKMDAP 221


>gi|300310882|ref|YP_003774974.1| 2-polyprenyl-6-methoxyphenol
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 547

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 2   AQHEVLIIGAGPTGMVLALWLNKFGVRVRILDKAAAPGTASRALVVQARTLELYRQLDLA 61
           ++H V++IGAGP G+  AL     G+ V +LD        SRA+    R LE++ +L +A
Sbjct: 24  SRHPVVVIGAGPIGLTAALECAARGLPVVVLDDNDTVSIGSRAVCYAKRPLEIWDRLGVA 83

Query: 62  DAVLAEGHRAQAFNLWTEGEHRAHVQLGAIGEGLTPYPFLQIFPQDRHEKLLAERLQVAG 121
             ++ +G   +   ++   E R   +   + E     P +    Q   E+ L E  Q   
Sbjct: 84  PRMVEKGVSWKLGKVFF--EEREVYRFDLLPEHAHKMPAMINLQQYYLEQYLVEACQAQP 141

Query: 122 -IAIERGIDFIDYSDAGSHIKARYLDTEGRAQTCEALYIVGCDGAHSMVRKSLGADFSGG 180
            I +      I      +H        +G  +  EA +++ CDGA+S  RK +GA+FSG 
Sbjct: 142 LIDLRWKHKMISLHQDDTHATLDVETPDGIFRM-EADWVIACDGANSDTRKMVGAEFSGQ 200

Query: 181 TYRQLFYVADI 191
            ++  F +AD+
Sbjct: 201 FFQDRFLIADV 211


>gi|300313232|ref|YP_003777324.1| 3-(3-hydroxyphenyl) propionate
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 544

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 4/196 (2%)

Query: 1   MAQHEVLIIGAGPTGMVLALWLNKFGVRVRILDKAAAPGTASRALVVQARTLELYRQLDL 60
           + Q +VLI+GAGP G+ L   L  +G+   ++++        RA+ +    L  ++   +
Sbjct: 14  VMQAQVLIVGAGPVGVTLGNLLGTYGISTLLIERNLDVLDYPRAVGIDDEALRTFQSAGM 73

Query: 61  ADAVLAEGHRAQAFNLWTEGEHRAHVQLGAIGEGLTPYPFLQIFPQDRHEKLLAERLQ-V 119
           ADA++ +  +     ++T  + R   ++         Y    +F Q   E  L   L+  
Sbjct: 74  ADAIVRDVIQNVPMRMYT-ADRRCFAEIQPTTREFGWYR-RNLFSQPLGEATLRLGLRRF 131

Query: 120 AGIAIERGIDFIDYSDAGSHIKARYLDTEGRAQTCEALYIVGCDGAHSMVR-KSLGADFS 178
             +++  G++ +D     + ++A  +D  G   T  A Y+VGCDG  S VR K L   + 
Sbjct: 132 EHVSLRSGVELLDLVQDEAGVQASIIDEHGAQATLRAQYVVGCDGGRSTVREKILKLPYE 191

Query: 179 GGTYRQLFYVADIEGS 194
           G T+   + V + +G 
Sbjct: 192 GKTHPAKWVVIECDGD 207


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 982,851
Number of extensions: 40997
Number of successful extensions: 197
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 195
Number of HSP's successfully gapped: 3
Length of query: 314
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 229
Effective length of database: 1,217,395
Effective search space: 278783455
Effective search space used: 278783455
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 130 (54.7 bits)