BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0082.0048.p
         (387 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310734|ref|YP_003774826.1| phosphopantothenoylcysteine syn...   633   0.0  

>gi|300310734|ref|YP_003774826.1| phosphopantothenoylcysteine
           synthetase/decarboxylase [Herbaspirillum seropedicae
           SmR1]
          Length = 398

 Score =  633 bits (1632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/381 (82%), Positives = 346/381 (90%)

Query: 1   VACYKAAELARGLGKAGASVQVVMTQAATQFITTITMQALTGNTVYTDQWDARIGNNMPH 60
           VACYKAA LAR LG+AGA+V VVMT+AAT F+T +TMQALTGN VYTDQWDAR+ NNMPH
Sbjct: 16  VACYKAAMLARELGRAGAAVHVVMTEAATHFMTAVTMQALTGNPVYTDQWDARMDNNMPH 75

Query: 61  IDLTRGIDAIVIVPCSTDFIFKLAHGACDDLLSTLCVARPHGVPLLIAPAMNVEMWQNPA 120
           I+LTR  DA+VIVPCSTDFI KLAHGACDDLLSTLCVARP  VPL++APAMNVEMWQNPA
Sbjct: 76  INLTRDADAVVIVPCSTDFIAKLAHGACDDLLSTLCVARPARVPLMVAPAMNVEMWQNPA 135

Query: 121 TQRNIAQVKQDGIVLLGPDSGDQACGEVGYGRMLEPAQLLEEIIAAFQPKLLAGRRVLLT 180
           TQRN+ Q+++DGI+LLGPD+G QACGEVG GRMLEPAQLLEEI+AA QPKLLAGRRVLLT
Sbjct: 136 TQRNVRQIREDGILLLGPDAGAQACGEVGEGRMLEPAQLLEEIVAALQPKLLAGRRVLLT 195

Query: 181 AGPTFEPIDPVRGITNLSSGKMGYALARAAREAGAEVVLVSGPTALDAPYGVRRIDVRTA 240
           AGPTFEPIDPVRGITNLSSGKMGYA+ARAAREAGAEV LVSGPTAL  PYGVRR+DV+TA
Sbjct: 196 AGPTFEPIDPVRGITNLSSGKMGYAIARAAREAGAEVTLVSGPTALATPYGVRRVDVQTA 255

Query: 241 QQMHDAVFANVSGQDIFIAVAAVADWRVANVSDQKLKKTADDDSLQLSFEQNADILADVA 300
           QQMHDAV A V+GQD+F+AVAAVADWRVAN S QKLKK  D D+ +L F QN DILA VA
Sbjct: 256 QQMHDAVMAQVAGQDLFVAVAAVADWRVANASAQKLKKQNDADTPELHFVQNPDILATVA 315

Query: 301 ALPKRPYCVGFAAESENLEQYGAAKRVKKNIPLLVGNIGHQTFGKNENALTLFDDKGHTS 360
           ALP+RPYCVGFAAESENLE YGAAKR+KKNIPLLVGNIGHQTFG+++NAL LFD +GHT+
Sbjct: 316 ALPQRPYCVGFAAESENLEHYGAAKRIKKNIPLLVGNIGHQTFGRDDNALMLFDAQGHTA 375

Query: 361 LPRADKQTLARQLVREIAHRL 381
           LPRADKQTLARQLVREIA RL
Sbjct: 376 LPRADKQTLARQLVREIARRL 396


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,111,160
Number of extensions: 43462
Number of successful extensions: 123
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 123
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 300
Effective length of database: 1,207,925
Effective search space: 362377500
Effective search space used: 362377500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)