BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0075.0015.p
         (290 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313629|ref|YP_003777721.1| oxalate/formate antiporter prot...   328   3e-91

>gi|300313629|ref|YP_003777721.1| oxalate/formate antiporter protein
           [Herbaspirillum seropedicae SmR1]
          Length = 416

 Score =  328 bits (841), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 164/209 (78%), Positives = 178/209 (85%), Gaps = 3/209 (1%)

Query: 66  KKKKKKKKXAAARNGVSLTSERPFGLPAGKAQLLLCVAGVACCVAMAMPQVHIVAYCGDL 125
           +   +    A+AR G      RPFGL  G AQLLLCVAGVACCVAMAMPQVHIVAYCGDL
Sbjct: 203 RPPAQDSSAASARPG---GGPRPFGLAPGSAQLLLCVAGVACCVAMAMPQVHIVAYCGDL 259

Query: 126 GYGAARGAQMLSLMLACGVVSRLISGLICDRIGGLRTLLLGSALQGIALLLFLPFDGLVS 185
           GYG ARGAQMLSLMLACGVVSRL+SG ICDRIGGLRTLLLGS LQG++LLLF+PFD L S
Sbjct: 260 GYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSMLQGLSLLLFIPFDSLAS 319

Query: 186 LYVISALFGLFQGGIVPSYAIIVREYFPASEAGGRVGAVIMCTMLGMALGGWMSGQIFDL 245
           LY+ISALFGLFQGGIVPSYAIIVREYFPA+EAG RVGAVIM TM GMALGGW+SG+IFD+
Sbjct: 320 LYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMALGGWVSGKIFDM 379

Query: 246 TGSYHAAFINGILWNLLNFSICMFLLRRT 274
           TGSYHAAF NGI WNLLN +I +FLL R 
Sbjct: 380 TGSYHAAFANGIAWNLLNLAIALFLLTRV 408



 Score = 61.2 bits (147), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 36/41 (87%)

Query: 26 DSSYAVVRLLITLVLMVIGASGMYVVAVVLPAVQAEFGVEK 66
          DS YAV+RL IT+VLMV+GASGMYV+AVVLP VQA + V++
Sbjct: 18 DSPYAVMRLCITMVLMVVGASGMYVIAVVLPYVQAHYYVDR 58


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.140    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 878,020
Number of extensions: 36278
Number of successful extensions: 239
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 244
Number of HSP's successfully gapped: 2
Length of query: 290
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 206
Effective length of database: 1,222,130
Effective search space: 251758780
Effective search space used: 251758780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)