BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0050.0001.p
         (154 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase [Her...   247   3e-67
gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase [Her...   131   3e-32
gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase [Her...   122   9e-30

>gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 250

 Score =  247 bits (630), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/141 (85%), Positives = 126/141 (89%)

Query: 1   MFSRLREDISSIIERDPAARNAWEVLTCYPGLHAVVLHRVANKCWMIGLKWLGRFISQLA 60
           MFSRLREDI+SI  RDPAARN+WEVLTCYPGLHA++LHR A  CW   LKWLGRFISQL 
Sbjct: 1   MFSRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLG 60

Query: 61  RWFTGIEIHPGATIGRRVFIDHGFGVVIGETAEIGDDCTIYQGVTLGGTSLNKGAKRHPT 120
           R  TGIEIHPGATIGRRVFIDHG GVVIGETA +GDD TIYQGVTLGGTSL KGAKRHPT
Sbjct: 61  RMLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLVKGAKRHPT 120

Query: 121 LGRGVIIGAGAQVLGGFTVGD 141
           LGRGVIIGAGA+VLGGFTVGD
Sbjct: 121 LGRGVIIGAGAKVLGGFTVGD 141


>gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 307

 Score =  131 bits (329), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 93/146 (63%), Gaps = 8/146 (5%)

Query: 3   SRLREDISSIIERDPAARNAWEVLTCYPGLHAVVLHRVANKCWMIGLKWLGRFISQLARW 62
           S+L  D+ +  + DPAAR+  EVL CYPG  A++ +R+A++ + +GL  L R I++LA  
Sbjct: 124 SQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAELAHA 183

Query: 63  FTGIEIHPGATIGRRVFIDHGFGVVIGETAEIGDDCTIYQGVTLGGT--------SLNKG 114
            TGI+IHPGA IG   FIDHG GVVIGETA IG++  IYQ VTLG           L KG
Sbjct: 184 ATGIDIHPGAQIGTGFFIDHGTGVVIGETAVIGNNVRIYQAVTLGAKRFPTDADGKLEKG 243

Query: 115 AKRHPTLGRGVIIGAGAQVLGGFTVG 140
             RHP +   V+I AGA +LG   +G
Sbjct: 244 RARHPIVEDDVVIYAGATILGRIRLG 269


>gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score =  122 bits (307), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 8/144 (5%)

Query: 5   LREDISSIIERDPAARNAWEVLTCYPGLHAVVLHRVANKCWMIGLKWLGRFISQLARWFT 64
           L  DI +    DPAA +  E+L CYPG  A++ HR+A+    +G   L R I+ +A   T
Sbjct: 135 LVSDIQAAYHGDPAASSISEILLCYPGTTAIIYHRLAHALHQLGAPLLARLIADIAHSAT 194

Query: 65  GIEIHPGATIGRRVFIDHGFGVVIGETAEIGDDCTIYQGVTLGGT--------SLNKGAK 116
           GI+IHP A IG   FIDHG GVVIGET  IG +  +YQ VTLG          SL KG  
Sbjct: 195 GIDIHPAAQIGPSFFIDHGTGVVIGETTIIGRNVRLYQAVTLGAKRFPQEPDGSLVKGIP 254

Query: 117 RHPTLGRGVIIGAGAQVLGGFTVG 140
           RHP +   V++ AGA +LG  T+G
Sbjct: 255 RHPIVEDDVVVYAGATLLGRITIG 278


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.327    0.144    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 558,686
Number of extensions: 24781
Number of successful extensions: 104
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 3
Length of query: 154
Length of database: 1,619,870
Length adjustment: 77
Effective length of query: 77
Effective length of database: 1,255,275
Effective search space: 96656175
Effective search space used: 96656175
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 126 (53.1 bits)