BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0049.0030.p
         (229 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313838|ref|YP_003777930.1| glucosamine 6-phosphate synthas...   144   8e-36
gi|300313709|ref|YP_003777801.1| L-glutamine:D-fructose-6-phosph...    62   3e-11

>gi|300313838|ref|YP_003777930.1| glucosamine 6-phosphate synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 336

 Score =  144 bits (362), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 73/89 (82%), Positives = 77/89 (86%), Gaps = 1/89 (1%)

Query: 102 DALRAADS-DWSKAVEILAPATSIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIK 160
           DALRAA + DWS AV+ L PA  IMVVGRGIGFPLALEAALK KET AIQAEAFSGAEIK
Sbjct: 177 DALRAACACDWSDAVQALTPADRIMVVGRGIGFPLALEAALKCKETCAIQAEAFSGAEIK 236

Query: 161 HGPMALINEGYPLLMFATRGPTQAGMLQL 189
           HGP+ALI EGYPLLMFA RGP+QAGML L
Sbjct: 237 HGPIALIEEGYPLLMFAIRGPSQAGMLAL 265



 Score =  122 bits (305), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/88 (78%), Positives = 72/88 (81%)

Query: 5  MLKEARSAGSHVAEQLARDQARYAELGRWLRTAPPSGIVTVARGSSDHAASYCAYLTMVR 64
          MLKEARSA  +VA QL RDQ RYA LG  LR APP+ IVTVARGSSDHAA+YCAYL M R
Sbjct: 1  MLKEARSAADYVAVQLTRDQDRYAALGARLRAAPPANIVTVARGSSDHAATYCAYLIMAR 60

Query: 65 LGHIVASLPMSLVTLNKAPLIARDALAI 92
          LG IVASLPMSLVTLN APL  RDALAI
Sbjct: 61 LGRIVASLPMSLVTLNHAPLQVRDALAI 88


>gi|300313709|ref|YP_003777801.1| L-glutamine:D-fructose-6-phosphate
           aminotransferase [Herbaspirillum seropedicae SmR1]
          Length = 605

 Score = 62.4 bits (150), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 42/62 (67%)

Query: 116 EILAPATSIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIKHGPMALINEGYPLLM 175
           E  A   + + +GRG+ +P+ALE ALK KE + I AEA++  E+KHGP+AL+ +  P++ 
Sbjct: 456 ESFARRENALFLGRGLHYPIALEGALKLKEITYIHAEAYAAGELKHGPLALVTDQMPVVT 515

Query: 176 FA 177
            A
Sbjct: 516 IA 517


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.131    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 630,808
Number of extensions: 22902
Number of successful extensions: 80
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 3
Length of query: 229
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 147
Effective length of database: 1,231,600
Effective search space: 181045200
Effective search space used: 181045200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)