BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0038.0028.p
         (480 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310422|ref|YP_003774514.1| gamma-glutamyltranspeptidase [H...   883   0.0  
gi|300313075|ref|YP_003777167.1| gamma-glutamyltranspeptidase [H...   121   1e-28

>gi|300310422|ref|YP_003774514.1| gamma-glutamyltranspeptidase
           [Herbaspirillum seropedicae SmR1]
          Length = 585

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/480 (88%), Positives = 452/480 (94%)

Query: 1   MIHDAKTGKNVALDFREMAPAKATRDMYLDNKGNVAPGRSLYTHLAVGVPGTVAGLTHAL 60
           MIHDAKTGKNVALDFREMAP +ATR+MYLD+KGNV PGRSLYTHLAVGVPGTVAGL+HAL
Sbjct: 106 MIHDAKTGKNVALDFREMAPQRATRNMYLDDKGNVVPGRSLYTHLAVGVPGTVAGLSHAL 165

Query: 61  QKYGTMKLSDVIAPAVKLAEKGYEVSPSLALILAAERDHLGQWDSSKAIFFKDGRPLRAG 120
            KYGTMKLS VI PAV+LAEKGY VS SLA IL+AER+HLGQWDSSKAIFFK+GRPL+ G
Sbjct: 166 SKYGTMKLSQVIQPAVELAEKGYPVSRSLAQILSAEREHLGQWDSSKAIFFKEGRPLQEG 225

Query: 121 EKLVQKDLAKSLKLIGKKGPSVFYEGEIGQKIVAEMDKHNGLITAADLKNYKVVEREPVV 180
           E LVQKDLAKSL+LI K+GP  FYEG I +KIVAEMDKH GLI+A DLKNYKVVER PV 
Sbjct: 226 ELLVQKDLAKSLRLIAKEGPKAFYEGSIAKKIVAEMDKHGGLISADDLKNYKVVERVPVS 285

Query: 181 GNYRGYQVMSMPPPSSGGVHIIQMMNILERYPLKQYGADSAQTIHLMAEAMKLAYADRAE 240
           GNYRGYQVMSMPPPSSGGVHIIQMMNILERYPLKQYGADSAQTIHLMAE MKLAYADR+E
Sbjct: 286 GNYRGYQVMSMPPPSSGGVHIIQMMNILERYPLKQYGADSAQTIHLMAETMKLAYADRSE 345

Query: 241 YLGDPDFNKVPVKGLTSRAYADELAKKINPDRATPSAELKPGKPQPYESDQTTHFSVADK 300
           YLGDPDF KVPVKGLTSRAYADELAKKINPDRATPS+E+KPG+PQPYESDQTTH+SVADK
Sbjct: 346 YLGDPDFTKVPVKGLTSRAYADELAKKINPDRATPSSEIKPGQPQPYESDQTTHYSVADK 405

Query: 301 QGNLIATTYTLNLNFGSGIVATGTGITLNNEMDDFSAKPGVPNAFGLVGGEANAVGPAKR 360
            GNL+ATTYTLNLNFGSGIVATGTGITLNNEMDDF+AKPGVPNAFGLVGG+ANAV P KR
Sbjct: 406 DGNLVATTYTLNLNFGSGIVATGTGITLNNEMDDFAAKPGVPNAFGLVGGDANAVAPYKR 465

Query: 361 PLSSMSPTFVLKDGKPFLVTGSPGGSRIITTTMQTILNVIEHDMNVAEATITPRIHHQWA 420
           PLSSMSPTFVLKDGKPFLVTGSPGGSRIITTT+QTILNVI+HDMNVAEATITPRIHHQWA
Sbjct: 466 PLSSMSPTFVLKDGKPFLVTGSPGGSRIITTTLQTILNVIDHDMNVAEATITPRIHHQWA 525

Query: 421 PDQLRIEKGISADTIKILQDKGQKISVQPSMGRTQTIQIKDGMFYGYSDPRNPDGRTLGF 480
           PDQLR+EKG+SADT+KILQDKGQKISVQPSMGRTQTIQI+   F G+SDPRNPDGRTLGF
Sbjct: 526 PDQLRVEKGLSADTLKILQDKGQKISVQPSMGRTQTIQIRSDGFDGFSDPRNPDGRTLGF 585


>gi|300313075|ref|YP_003777167.1| gamma-glutamyltranspeptidase
           [Herbaspirillum seropedicae SmR1]
          Length = 527

 Score =  121 bits (303), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 181/434 (41%), Gaps = 32/434 (7%)

Query: 56  LTHALQKYGTMKLSDVIAPAVKLAEKGYEVSPSLALILAAERDHLGQWDSSKAIFFKDGR 115
           L HA +    + L  ++A A+  A+ G  V+ S   +   +   L       A +  DG 
Sbjct: 117 LEHAQRFASGLPLPVLLADAIGHAQAGIPVTRSQHELTRDKWSELKDQPGFAATYAADGV 176

Query: 116 PLRAGEKLVQKDLAKSLKLIGKKGPSVFYEGEIGQKIVAEMDKHNGLITAADLKNYKVVE 175
           P + G+ L Q  LA SL  + + G   FY G++ Q + A +      +  +DL+ ++   
Sbjct: 177 PPQ-GKVLKQSALAASLSRLAEAGLDDFYRGDLAQSLAAGLQAAGSPLRRSDLEAFRAQV 235

Query: 176 REPVVGNYRGYQVMSMPPPSSGGVHIIQMMNILERYPLKQYGADSAQTIHLMAEAMKLAY 235
            +P++      +V ++PPP+  GV  + ++ + +R  + Q  AD    +H + EA K A+
Sbjct: 236 VQPLMVQLSSGRVYNLPPPTQ-GVSALMIIGLFDRLGVTQ--ADGFAHLHGLVEATKRAF 292

Query: 236 ADRAEYLGDPDFNKVPVKGLTSRAYADELAKKINPDRATPSAELKPGKPQPYESDQTTHF 295
             R +++ DP   +V           D+  + I+  RA P        P P     T   
Sbjct: 293 ILRNQHVTDPAHMRVDAAQWLLAGALDQEVRHIDMQRAAP-------WPHPARPGDTIWM 345

Query: 296 SVADKQGNLIATTYTLNLNFGSGIVATGTGITLNNEMDDFSAKPGVPNAFGLVGGEANAV 355
             AD QG +++   ++   FGSG+V   TGI   N    F+   GV           N +
Sbjct: 346 GAADAQGRVVSYIQSIFWEFGSGVVVPDTGIVWQNRGASFTLDEGV-----------NQL 394

Query: 356 GPAKRPLSSMSPTFVLKDGKPFLVTGSPGGSRIITTTMQTILNVIEHDMNVAEATITPR- 414
            P K P  +++P+    D    L  G+ GG     T        +    N+  A   PR 
Sbjct: 395 QPGKLPFHTLNPSLAQLDDGRTLAFGTMGGEGQPQTQAAVFTRHVLFGQNLQAAVSAPRW 454

Query: 415 -IHHQWA--PDQLRIEKGISADTIKILQDKGQKISV----QPSMGRTQTIQIK-DGMFYG 466
            +   W      L++E  I   TI+ L+  G ++ V       MG    + +  DG+  G
Sbjct: 455 LLGRTWGDVSTNLKLEGRIPEATIQALRRAGHEVQVVDDYADMMGHAGAVCVHPDGLIEG 514

Query: 467 YSDPRNPDGRTLGF 480
            +DPR  DG   G 
Sbjct: 515 ATDPRA-DGVCAGL 527


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.315    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,576,779
Number of extensions: 67954
Number of successful extensions: 128
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 125
Number of HSP's successfully gapped: 2
Length of query: 480
Length of database: 1,619,870
Length adjustment: 89
Effective length of query: 391
Effective length of database: 1,198,455
Effective search space: 468595905
Effective search space used: 468595905
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 132 (55.5 bits)