BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0007.p
         (289 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311216|ref|YP_003775308.1| exopolyphosphatase [Herbaspiril...   268   3e-73

>gi|300311216|ref|YP_003775308.1| exopolyphosphatase [Herbaspirillum
           seropedicae SmR1]
          Length = 485

 Score =  268 bits (686), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 117/162 (72%), Positives = 148/162 (91%)

Query: 126 RARQVAETALGFFQMLKPGNEAYAKYLNWSALLHEAGLIVSQSSYHKHSSYLIANADLPG 185
           RA  VA+TALGFFQ+LKP  ++YA+YL WSALLHE GL+VS + YHKHS+Y+IANADLPG
Sbjct: 323 RAHGVADTALGFFQLLKPATDSYARYLYWSALLHETGLVVSPTGYHKHSAYMIANADLPG 382

Query: 186 FTTREQRVMSTLILGQKGNLRKIGEVVSDPDFAKAVLALRLAVMFMHAHITLDLDDIRLK 245
           FTTREQR+MSTLILGQKGNL+KI E+++D DFAKAVLALRLAVMF HAHITLDL+ +R+K
Sbjct: 383 FTTREQRLMSTLILGQKGNLKKISEMLADIDFAKAVLALRLAVMFRHAHITLDLEKVRVK 442

Query: 246 MKSRIDIEIKRDWLRDHPTVSYWMQKEQEWWSGIGVDLSIRV 287
           +KSRID+EI+RD++++HP++S+W QKEQEWW+GIGVD +++V
Sbjct: 443 LKSRIDLEIRRDYIKEHPSISFWFQKEQEWWAGIGVDFAVKV 484



 Score =  199 bits (507), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 103/143 (72%), Positives = 115/143 (80%), Gaps = 1/143 (0%)

Query: 1   MFAAVDLGSNSFRMHIGKHEGDAIRVIKSARDPIRLAAGLDKNGRLTPQAIAGAVESLAR 60
           MFAAVDLGSNSFR+HIGK+E + IRVIKSARDPIRLAAG+DK G LT QA   A++SL R
Sbjct: 1   MFAAVDLGSNSFRLHIGKYEDEGIRVIKSARDPIRLAAGIDKTGNLTEQACQSAIDSLTR 60

Query: 61  FRTILRDYQLDAVRVVATNTLRVARNAHEFLPDAERAIGYPVEIISGEEEGRLIYMGVAG 120
           FR ILRDY L AVRVVATNTLRVA+NA E LP  ERAIGYPVEIISGEEEGRLIYMGVAG
Sbjct: 61  FRAILRDYPLTAVRVVATNTLRVAKNAGELLPALERAIGYPVEIISGEEEGRLIYMGVAG 120

Query: 121 ALA-TGRARQVAETALGFFQMLK 142
            LA  G  R V +   G  ++++
Sbjct: 121 VLADAGEERMVIDIGGGSTEVIR 143


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 903,409
Number of extensions: 36791
Number of successful extensions: 139
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 2
Length of query: 289
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 205
Effective length of database: 1,222,130
Effective search space: 250536650
Effective search space used: 250536650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)