BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0037.p
         (628 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311510|ref|YP_003775602.1| phosphoenolpyruvate synthase/py...  1169   0.0  

>gi|300311510|ref|YP_003775602.1| phosphoenolpyruvate
           synthase/pyruvate phosphate dikinase [Herbaspirillum
           seropedicae SmR1]
          Length = 791

 Score = 1169 bits (3024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/628 (91%), Positives = 595/628 (94%), Gaps = 3/628 (0%)

Query: 1   MTDVESVGGKNASLGEMISQLAGAGVRVPSGFATTAQAFRDFLEHSANGGATLAQRIADR 60
           MTDVESVGGKNASLGEMISQLAGAGVRVP GFATTAQAFRDFLEHSA+GG TLA RIA R
Sbjct: 21  MTDVESVGGKNASLGEMISQLAGAGVRVPGGFATTAQAFRDFLEHSADGGPTLAARIAKR 80

Query: 61  LVTLDIEDVRALAQAGAEIRQWIIDTPFQPALEQQIKSFYDKLVADSTAEMSFAVRSSAT 120
           L  LDI+DVR+LAQAGAEIRQWIIDTPFQP L+Q+I++FYDKLVADSTAEMSFAVRSSAT
Sbjct: 81  LEGLDIDDVRSLAQAGAEIRQWIIDTPFQPRLDQEIRAFYDKLVADSTAEMSFAVRSSAT 140

Query: 121 AEDLPDASFAGQQETFLNVVGIDNVLEAMKHVFASLYNDRAISYRVHKGFTHAEVALSAG 180
           AEDLPDASFAGQQETFLNVVGIDNVLEAMKHVFASLYNDRAISYRVHKGFTHAEVALSAG
Sbjct: 141 AEDLPDASFAGQQETFLNVVGIDNVLEAMKHVFASLYNDRAISYRVHKGFTHAEVALSAG 200

Query: 181 VQRMVRSDVGAAGVMFTIDTESGFKDVVFITSSYGLGETVVQGAVNPDEFYVHKPMLEQG 240
           VQRMVRSDVGAAGVMFTIDTESGFKDVVFITSSYGLGETVVQGAVNPDE+YVHKPMLE G
Sbjct: 201 VQRMVRSDVGAAGVMFTIDTESGFKDVVFITSSYGLGETVVQGAVNPDEYYVHKPMLELG 260

Query: 241 KLPIIRRNIGSKLIKMEFTGEAKAGRSVKTVDVPVEMRNRYSLNDAEIVELAKYAAIIEK 300
           K P+IRRN+GSKLIKMEFTGEAKAGRSVKTVDVPVE+RNRYSL DAE+VELAKYA IIEK
Sbjct: 261 KQPVIRRNLGSKLIKMEFTGEAKAGRSVKTVDVPVELRNRYSLTDAEVVELAKYATIIEK 320

Query: 301 HYERPMDIEWGKDGRDGKLYILQARPETVKSQQKATDAQQRFKLKGSSAVLATGRAIGQK 360
           HY+RPMDIEWGKDGRDGKLYILQARPETVKSQQKATDAQQRFKLK S  VLATGRAIGQK
Sbjct: 321 HYQRPMDIEWGKDGRDGKLYILQARPETVKSQQKATDAQQRFKLKSSGTVLATGRAIGQK 380

Query: 361 IGAGPVRVIRDAAEMERVQPGDVLVADMTDPNWEPVMKRAAAIVTNRGGRTCHAAIIARE 420
           IGAGPVRVI D AEMERVQPGDVLVADMTDPNWEPVMKRA+AIVTNRGGRTCHAAIIARE
Sbjct: 381 IGAGPVRVITDPAEMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARE 440

Query: 421 LGVPAVVGCGDATDMLKDGTLVTVSCAEGDEGKIYDGLLETEITEVARGELPSIPLKIMM 480
           LGVPAVVGCGDATD+LKDGTLVTVSCAEGDEGKIYDGLLETE+TEVARGELP IPLK+MM
Sbjct: 441 LGVPAVVGCGDATDVLKDGTLVTVSCAEGDEGKIYDGLLETEVTEVARGELPPIPLKVMM 500

Query: 481 NVGNPQLAFDFQSIPNGGVGLARLEFIINNNIGVHPRAILEYPNIDADLKKAVESVARGH 540
           NVGNPQLAFDFQSIPNGGVGLARLEFIINNNIGVHP+AILEYPNIDADLKKAVESVARGH
Sbjct: 501 NVGNPQLAFDFQSIPNGGVGLARLEFIINNNIGVHPKAILEYPNIDADLKKAVESVARGH 560

Query: 541 ASPKAFYVDKLAEGIATIAAAFWPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFR 600
           ASPKAFYVDKLAEGIATIAAAFWPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFR
Sbjct: 561 ASPKAFYVDKLAEGIATIAAAFWPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFR 620

Query: 601 GSVRNGMPGHEXFCRSVRNGMPGHEARA 628
           G+ R      + F  + +     HEARA
Sbjct: 621 GAARYLA---DDFAEAFQMECQAHEARA 645


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,005,538
Number of extensions: 88366
Number of successful extensions: 267
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 537
Effective length of database: 1,188,985
Effective search space: 638484945
Effective search space used: 638484945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 133 (55.8 bits)