BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0027.p
         (164 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311503|ref|YP_003775595.1| UDP-3-O-3-hydroxymyristoyl gluc...   153   5e-39

>gi|300311503|ref|YP_003775595.1| UDP-3-O-3-hydroxymyristoyl
           glucosamine N-acyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 362

 Score =  153 bits (387), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 78/85 (91%)

Query: 77  KYCSIGGAAMIHGHITIADRVHVSAGTLALRSILEPGQYTGFYPIAKHGEWEKSAALVRN 136
           KYCSIGGAAMIHGHITI D+VHVSAGTLALRSILEPGQYTGFYPI +H +WEKSAALVRN
Sbjct: 267 KYCSIGGAAMIHGHITIVDKVHVSAGTLALRSILEPGQYTGFYPITEHRDWEKSAALVRN 326

Query: 137 LGTMREKIRALEKTIKSLTAQPTEQ 161
           LGTMREKIRALEK++K+LT +   Q
Sbjct: 327 LGTMREKIRALEKSLKTLTQEQAGQ 351



 Score =  110 bits (275), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/78 (79%), Positives = 68/78 (87%)

Query: 1  LVERLGGQLKGNAQIEVGGIAPLDAATSSHMTFLSNPKFRAQAEQTQAAVLILSEADDEA 60
          LVERLGG+LKG+AQI V GIAPLDAA SSH+TFLSNPKFRAQA+QTQAA LILSEADD  
Sbjct: 8  LVERLGGELKGDAQIAVQGIAPLDAAGSSHITFLSNPKFRAQADQTQAAALILSEADDAQ 67

Query: 61 IVAYQGARIVTRNPYXKY 78
          + AY GARIVTRNPY  +
Sbjct: 68 VQAYAGARIVTRNPYAYF 85


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.316    0.131    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 478,902
Number of extensions: 16772
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 2
Length of query: 164
Length of database: 1,619,870
Length adjustment: 78
Effective length of query: 86
Effective length of database: 1,250,540
Effective search space: 107546440
Effective search space used: 107546440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 127 (53.5 bits)