BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0058.p
         (230 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312996|ref|YP_003777088.1| 1-acyl-sn-glycerol-3-phosphate ...   247   6e-67

>gi|300312996|ref|YP_003777088.1| 1-acyl-sn-glycerol-3-phosphate
           O-acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 262

 Score =  247 bits (631), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 126/180 (70%), Positives = 148/180 (82%)

Query: 16  MLKRLPHLLNKYWRVGCTAISFTAFGVGGLALRLFIFPLLNLLVRDEQSRTIWARRIIRL 75
           ML R+  L+++ WR+  T + F  FG+GGL LRL +FP+L LLVRD Q R +WAR IIRL
Sbjct: 1   MLDRVFALIDRGWRILATGMCFALFGLGGLLLRLVVFPILQLLVRDAQQRVLWARHIIRL 60

Query: 76  SFRAFVELMSTLGVLSYRISGRERLQRKGLLILANHPSLIDTVLLMAFVKQADCIVKSSL 135
           +FRAFVELM   GV+ Y ISG ERL R G LILANHP+LIDTVLLMAFV+ ADCIVK++L
Sbjct: 61  AFRAFVELMRICGVIRYEISGLERLNRNGQLILANHPTLIDTVLLMAFVRHADCIVKNAL 120

Query: 136 WRNPFTRGPVRAAGYISNTQGPELVDDCISSMRSGGNLIIFPEGTRTPADGNMSFKRGAA 195
           WRNPFTRGP+RAAGYISN QGP+L++DCI S+RSGGNLIIFPEGTRTP DG +S KRGAA
Sbjct: 121 WRNPFTRGPIRAAGYISNDQGPDLIEDCIRSIRSGGNLIIFPEGTRTPTDGQISLKRGAA 180


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.139    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 616,621
Number of extensions: 20475
Number of successful extensions: 70
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 148
Effective length of database: 1,231,600
Effective search space: 182276800
Effective search space used: 182276800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)