BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0019.p
         (418 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospho...   568   e-163
gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospho...   155   8e-39

>gi|300310389|ref|YP_003774481.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  568 bits (1464), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/401 (69%), Positives = 324/401 (80%), Gaps = 4/401 (0%)

Query: 17  ALSDSSRPAGASAPPATRLFLRLLNCLAHGHLQLITPHGNTLTFGDLHQPPSAQMVIRDW 76
           AL  + R AG   P + RLFL +L  L+HGHL+LITPHG TLTFGDL QPPSAQ+ I DW
Sbjct: 6   ALQTTGRRAG---PISARLFLAMLERLSHGHLELITPHGTTLTFGDLRQPPSAQLRILDW 62

Query: 77  RACARMLQAGDIGFAESYAAGWIDTPDLSALLRLCLRNQAELERMMFGGKLAGLWYRLRH 136
           RAC  +L+AGDIGF E+Y  GW+DTPDL+ALLRL +RN+  L   + GG LA  WYRLRH
Sbjct: 63  RACGAILRAGDIGFGEAYGHGWVDTPDLAALLRLAMRNRQVLSSAVEGGWLASWWYRLRH 122

Query: 137 LMRANTRAGSRKNIHAHYDIGNAFYHQWLDRSWTYSSAIFDGDHGQSLEAAQARKYQRII 196
           L+R+NTR+GSR+NIHAHYD+GN FY  WLD + +YSSAIF    GQSLE AQA KYQRI+
Sbjct: 123 LLRSNTRSGSRRNIHAHYDLGNDFYRLWLDPTMSYSSAIFSAP-GQSLEQAQAAKYQRIV 181

Query: 197 DQLGLQAGDHVLEIGCGWGGFAEHAASLGIRVHGVTISAAQLQVAQQRLAERGLDHLARL 256
           DQLGL+AGD VLEIGCGWGGFAEHAA LGIRVHGVTIS AQL  AQ+R+  + LDHLA L
Sbjct: 182 DQLGLRAGDRVLEIGCGWGGFAEHAARLGIRVHGVTISPAQLAYAQERMRTQQLDHLAHL 241

Query: 257 ELCDYRDLKGEYDAVVSIEMFEAVGERYWQQYFDTVSARLKRGGRAMIQSITIAEQYFER 316
           ELCDYRDL G+YDA+VSIEMFEAVGER+WQ YFDTV ARLK GG+A+IQSITI E  FER
Sbjct: 242 ELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTVCARLKAGGQALIQSITIEEAVFER 301

Query: 317 YRNTSDFIRQYIFPGGMLPSPERFCAKARNAGLQTLDQYRFGIDYAETLRRWHASFLRAR 376
           YR+++DFIR++IFPGGMLPS ERF   A+ AGL T +++ FG DYAETLRRWH SFL  R
Sbjct: 302 YRDSADFIREFIFPGGMLPSHERFSRCAQRAGLATRERFHFGRDYAETLRRWHDSFLAQR 361

Query: 377 DAIRKQGFDERFMRLWQLYYAYCEVGFDEERTDVIQFMLQK 417
           + I  QGFDERF RLWQLYY +CEVGFDE +TDV+QF+L K
Sbjct: 362 ETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTDVVQFLLHK 402


>gi|300310016|ref|YP_003774108.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score =  155 bits (391), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 173/375 (46%), Gaps = 16/375 (4%)

Query: 48  LQLITPHGNTLTFGDLHQPPSAQMVIRDWRACARMLQAGDIGFAESYAAGWIDTP-DLSA 106
           L+L+  +G    FG     P   + +    A   +L        E+Y  G I+    + +
Sbjct: 28  LRLVLWNGQQYDFGS--GTPEVTLKVPHASAITSLLTPSLANLGEAYVEGKIEVEGKVKS 85

Query: 107 LLRLCLRNQAELERMMFGGKLAGLWYRLRHLMRANTRAGSRKNIHAHYDIGNAFYHQWLD 166
           ++++   N      +   G+L  +   + H     TR    + I  HYD+ N FY  +LD
Sbjct: 86  IIQVA--NSLASNTLKAEGRLGRMVRSVTH-----TRKRDAEAIQYHYDVSNDFYKLFLD 138

Query: 167 RSWTYSSAIF-DGDHGQSLEAAQARKYQRIIDQLGLQAGDHVLEIGCGWGGFAEHAA-SL 224
               YS A F +GD  + L  AQ +K   I++++ L+ G  +L+IGCGWG     AA   
Sbjct: 139 EHMVYSCAYFENGD--EDLATAQIKKIDHILEKIQLRPGQTLLDIGCGWGALVLRAAQKY 196

Query: 225 GIRVHGVTISAAQLQVAQQRLAERGLDHLARLELCDYRDLKGEYDAVVSIEMFEAVGERY 284
           G R  GVT+S  Q  +A++R+   GL     + L DYRD+ G +D + S+ MFE VG + 
Sbjct: 197 GARCVGVTLSRNQYALARERVEAAGLSDRIEIRLQDYRDVTGSFDRITSVGMFEHVGIKN 256

Query: 285 WQQYFDTVSARLKRGGRAMIQSITIAE-QYFERYRNTSDFIRQYIFPGGMLPSPERFCAK 343
              YF  +   L  GG AM   IT  + +  E      +FI +Y+FP G LP        
Sbjct: 257 LPSYFAQIRKLLADGGMAMNHGITSTDIENGESPYGAGEFIDKYVFPAGELPHISTVLKT 316

Query: 344 ARNAGLQTLDQYRFGIDYAETLRRWHASFLRARDAIRKQGFDERFMRLWQLYYAYCEVGF 403
            +  GL+  D       YA T   W  +F    +AI +   DE+  R+W++Y A    GF
Sbjct: 317 MQEGGLEAFDVENLRRHYARTCGIWADNFEANTEAIHRVT-DEKHYRIWRVYLAGSAYGF 375

Query: 404 DEERTDVIQFMLQKS 418
           + +   + Q +  K+
Sbjct: 376 ERDWISLYQVVCTKA 390


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.137    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,309,599
Number of extensions: 53241
Number of successful extensions: 215
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 2
Length of query: 418
Length of database: 1,619,870
Length adjustment: 88
Effective length of query: 330
Effective length of database: 1,203,190
Effective search space: 397052700
Effective search space used: 397052700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 132 (55.5 bits)