tRNAscan-SE v.1.23 (April 2002) - scan sequences for transfer RNAs Please cite: Lowe, T.M. & Eddy, S.R. (1997) "tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence" Nucl. Acids Res. 25: 955-964. This program uses a modified, optimized version of tRNAscan v1.3 (Fichant & Burks, J. Mol. Biol. 1991, 220: 659-671), a new implementation of a multistep weight matrix algorithm for identification of eukaryotic tRNA promoter regions (Pavesi et al., Nucl. Acids Res. 1994, 22: 1247-1256), as well as the RNA covariance analysis package Cove v.2.4.2 (Eddy & Durbin, Nucl. Acids Res. 1994, 22: 2079-2088). ------------------------------------------------------------ Sequence file(s) to search: ../Fasta/teste2/Contigs/n/Contig2.fas Search Mode: Bacterial Results written to: Standard output Output format: Tabular Searching with: tRNAscan + EufindtRNA -> Cove Covariance model: TRNA2-bact.cm tRNAscan parameters: Strict EufindtRNA parameters: Relaxed (Int Cutoff= -36) ------------------------------------------------------------ tRNAscan1.4: main cannot open TPCsignal consensus file tRNAscan could not complete successfully for Contig2.n. Possible memory allocation problem or missing file. (Exit code=256).