BLASTP Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0260.0016.p (595 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766683.1| conjugal transfer coupling protein TraG [Bradyr... 1170 0.0 ref|ZP_08868534.1| Conjugal transfer protein traG [Azospirillum ... 1042 0.0 ref|ZP_07026216.1| TRAG family protein [Afipia sp. 1NLS2] >gi|29... 1019 0.0 ref|YP_002277165.1| conjugal transfer coupling protein TraG [Glu... 1018 0.0 ref|YP_001925774.1| conjugal transfer coupling protein TraG [Met... 993 0.0 >ref|NP_766683.1| conjugal transfer coupling protein TraG [Bradyrhizobium japonicum USDA 110] dbj|BAC45308.1| conjugal transfer protein [Bradyrhizobium japonicum USDA 110] Length = 675 Score = 1170 bits (3026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/596 (98%), Positives = 589/596 (98%), Gaps = 2/596 (0%) Query: 2 DGLAPRL--XGAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGLL 59 D AP + GAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGLL Sbjct: 80 DAYAPSIFTEGAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGLL 139 Query: 60 GPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENWQ 119 GPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENWQ Sbjct: 140 GPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENWQ 199 Query: 120 LTAGFRARHGRVLLFDPTNVKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 179 LTAGFRARHGRVLLFDPTN KSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH Sbjct: 200 LTAGFRARHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 259 Query: 180 WEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHPV 239 WEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHPV Sbjct: 260 WEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHPV 319 Query: 240 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLYL 299 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLYL Sbjct: 320 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLYL 379 Query: 300 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 359 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF Sbjct: 380 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 439 Query: 360 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 419 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK Sbjct: 440 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 499 Query: 420 AMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARYY 479 AMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARYY Sbjct: 500 AMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARYY 559 Query: 480 EDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQP 539 EDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQP Sbjct: 560 EDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQP 619 Query: 540 ELDRDTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL 595 ELDRDTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL Sbjct: 620 ELDRDTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL 675 >ref|ZP_08868534.1| Conjugal transfer protein traG [Azospirillum amazonense Y2] gb|EGY01876.1| Conjugal transfer protein traG [Azospirillum amazonense Y2] Length = 660 Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/596 (87%), Positives = 554/596 (92%), Gaps = 2/596 (0%) Query: 2 DGLAPRL--XGAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGLL 59 D AP + GA+IA+SGG IAAAVAIGMSVWRAREAKN ETYGSARWA+ KEIEQAGLL Sbjct: 65 DAYAPSIFIEGAYIASSGGFIAAAVAIGMSVWRAREAKNIETYGSARWAQPKEIEQAGLL 124 Query: 60 GPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENWQ 119 GPDGVVLGR +R+YLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHD+KGENWQ Sbjct: 125 GPDGVVLGRHQRSYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDIKGENWQ 184 Query: 120 LTAGFRARHGRVLLFDPTNVKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 179 LTAGFRA+HGR+LLFDPTN KSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH Sbjct: 185 LTAGFRAQHGRILLFDPTNPKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 244 Query: 180 WEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHPV 239 WEKTSHALLVGAILHVLYAEEDKTLAGVA+FLSDPKRPIE+TLAAMM+TAHLGEAGVHPV Sbjct: 245 WEKTSHALLVGAILHVLYAEEDKTLAGVASFLSDPKRPIESTLAAMMKTAHLGEAGVHPV 304 Query: 240 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLYL 299 VASAARELLNKS NERSGVLSTAMSFLGLYRDPVVAEVTR CDWRI DIV G+R TTLYL Sbjct: 305 VASAARELLNKSANERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIGDIVAGDRPTTLYL 364 Query: 300 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 359 VVPPSDINRTKPLIRLILNQ+GRRLTEDLQAK GRRRLLLMLDEFPALGRLDFFESALAF Sbjct: 365 VVPPSDINRTKPLIRLILNQVGRRLTEDLQAKGGRRRLLLMLDEFPALGRLDFFESALAF 424 Query: 360 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 419 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK Sbjct: 425 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 484 Query: 420 AMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARYY 479 AMKNYAGSRL+PWLGHLMVSRSETARPLLTPGE+MQLPP+DEIVM+SG+HPIRAKKA YY Sbjct: 485 AMKNYAGSRLSPWLGHLMVSRSETARPLLTPGEVMQLPPTDEIVMVSGVHPIRAKKAHYY 544 Query: 480 EDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQP 539 ED R QERI+APP+L + R DDWS+RPLPPRP A N + DDEDPK ADRR+QP Sbjct: 545 EDERLQERIVAPPVLVRPKEVRPDDWSARPLPPRPPAPVAGNGEDVDDEDPKNADRRKQP 604 Query: 540 ELDRDTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL 595 EL +DTVE + P+ENEFA D VD+++ED PRI RMND+MQG+A+QASLDPGDDLG+ Sbjct: 605 ELSQDTVEKQAPIENEFALDQVDDMEEDAPRIGRMNDLMQGLAQQASLDPGDDLGM 660 >ref|ZP_07026216.1| TRAG family protein [Afipia sp. 1NLS2] gb|EFI53358.1| TRAG family protein [Afipia sp. 1NLS2] Length = 660 Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/596 (87%), Positives = 555/596 (93%), Gaps = 2/596 (0%) Query: 2 DGLAPRL--XGAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGLL 59 D AP + GA+IAASGGIIAAAVAIGMSVWRA EAKNAETYGSARWA+ KEIE AGL Sbjct: 65 DAYAPDIFIEGAYIAASGGIIAAAVAIGMSVWRAHEAKNAETYGSARWAQPKEIEAAGLS 124 Query: 60 GPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENWQ 119 GPDGVVLGR++R+YLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHD+KGENWQ Sbjct: 125 GPDGVVLGRYQRSYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDIKGENWQ 184 Query: 120 LTAGFRARHGRVLLFDPTNVKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 179 LTAGFRA+HGRVLLFDPTN KSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH Sbjct: 185 LTAGFRAQHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 244 Query: 180 WEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHPV 239 WEKTSHALLVGAILHVLYAE DKTLAGVA+FLSDPKRPIE+TL+AMMRT HLGEAGVHPV Sbjct: 245 WEKTSHALLVGAILHVLYAEGDKTLAGVASFLSDPKRPIESTLSAMMRTPHLGEAGVHPV 304 Query: 240 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLYL 299 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTR CDWRI DIV GER TTLYL Sbjct: 305 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIGDIVAGERPTTLYL 364 Query: 300 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 359 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF Sbjct: 365 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 424 Query: 360 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 419 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK Sbjct: 425 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 484 Query: 420 AMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARYY 479 AMKNYAGSRL+PWLGHLMVSRSETARPLLTPGE+MQLPP+DEIVM+SG+HPIRAKKARYY Sbjct: 485 AMKNYAGSRLSPWLGHLMVSRSETARPLLTPGEVMQLPPTDEIVMVSGVHPIRAKKARYY 544 Query: 480 EDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQP 539 ED R QERI+ PP+ T+ R DDWSSRPLPPRP A + ++ DDEDPK ADRR+QP Sbjct: 545 EDARLQERILPPPVPTQPKVSRSDDWSSRPLPPRPPAPAVRDGEEADDEDPKNADRRRQP 604 Query: 540 ELDRDTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL 595 EL+++TVE K+P++NEFA D DEL+ED PR+ RMND+MQG+A QASLDPGDDLGL Sbjct: 605 ELNQETVEKKQPIDNEFALDPTDELEEDAPRVGRMNDLMQGLACQASLDPGDDLGL 660 >ref|YP_002277165.1| conjugal transfer coupling protein TraG [Gluconacetobacter diazotrophicus PAl 5] gb|ACI52550.1| TRAG family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 660 Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/596 (86%), Positives = 553/596 (92%), Gaps = 2/596 (0%) Query: 2 DGLAPRL--XGAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGLL 59 D AP + GA+IA+SGG+IAAAVAIGMSVWRAREA+N TYGSARWA+ +EI +AGLL Sbjct: 65 DAYAPSIFIEGAYIASSGGLIAAAVAIGMSVWRAREAENIATYGSARWAQPQEIAEAGLL 124 Query: 60 GPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENWQ 119 G DGVVLGR +R+YLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHD+KGENWQ Sbjct: 125 GSDGVVLGRHQRSYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDIKGENWQ 184 Query: 120 LTAGFRARHGRVLLFDPTNVKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 179 LTAGFRA+HGRVLLFDPTN KSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH Sbjct: 185 LTAGFRAQHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNH 244 Query: 180 WEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHPV 239 WEKTSHALLVGAILHVLYAEEDKTLAGVA+FLSDPKRPIE+TL+AMMRT HLGEAGVHPV Sbjct: 245 WEKTSHALLVGAILHVLYAEEDKTLAGVASFLSDPKRPIESTLSAMMRTPHLGEAGVHPV 304 Query: 240 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLYL 299 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTR CDWRI DIV G+ TTLYL Sbjct: 305 VASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIGDIVAGDWPTTLYL 364 Query: 300 VVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 359 VVPPSDINRTKPLIRLILNQ+GRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF Sbjct: 365 VVPPSDINRTKPLIRLILNQVGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALAF 424 Query: 360 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 419 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK Sbjct: 425 MAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMK 484 Query: 420 AMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARYY 479 AMKNYAGSRL+PWLGHLMVSRSETARPLLTPGE+MQLPP+DEIVM+SG+HPIRAKKARYY Sbjct: 485 AMKNYAGSRLSPWLGHLMVSRSETARPLLTPGEVMQLPPTDEIVMVSGVHPIRAKKARYY 544 Query: 480 EDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQP 539 ED R QERIMAPP+L + R DDWSSRPLPPRP A ++D+ DDEDPK DRR+QP Sbjct: 545 EDERLQERIMAPPVLARPKEVRPDDWSSRPLPPRPPAPAGVDDEDADDEDPKNTDRRKQP 604 Query: 540 ELDRDTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL 595 EL + TVE + P+ENEFA D VD+++ED PRI RMND+MQG+A+QASLDPGDDLG+ Sbjct: 605 ELSQGTVEKQAPIENEFALDPVDDMEEDAPRIGRMNDLMQGLAQQASLDPGDDLGM 660 >ref|YP_001925774.1| conjugal transfer coupling protein TraG [Methylobacterium populi BJ001] gb|ACB81239.1| TRAG family protein [Methylobacterium populi BJ001] Length = 661 Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/598 (82%), Positives = 529/598 (88%), Gaps = 3/598 (0%) Query: 1 MDGLAPRL--XGAFIAASGGIIAAAVAIGMSVWRAREAKNAETYGSARWAKAKEIEQAGL 58 D AP + GA+IAASGG I+ AVAIGMSVWRAREAK ETYGSARWA+ +E++ AGL Sbjct: 64 FDAYAPSIFVEGAWIAASGGFISVAVAIGMSVWRAREAKKVETYGSARWAEKEEVKAAGL 123 Query: 59 LGPDGVVLGRFERTYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDLKGENW 118 L PDGVVLGR++ YLRHDGPEHVLCFAPTRSGKGVGLV+PSLLTWPGSAIVHD+KGENW Sbjct: 124 LNPDGVVLGRYDHDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKGENW 183 Query: 119 QLTAGFRARHGRVLLFDPTNVKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRN 178 QLTAGFRARHGRVLLFDPTN KSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRN Sbjct: 184 QLTAGFRARHGRVLLFDPTNPKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRN 243 Query: 179 HWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIETTLAAMMRTAHLGEAGVHP 238 HWEKTSHALLVGAILHVLYAEE+KTLAGVAAFLSDPKRPIE+TLAAMM+TAHLGEAG HP Sbjct: 244 HWEKTSHALLVGAILHVLYAEEEKTLAGVAAFLSDPKRPIESTLAAMMKTAHLGEAGPHP 303 Query: 239 VVASAARELLNKSGNERSGVLSTAMSFLGLYRDPVVAEVTRCCDWRITDIVGGERATTLY 298 V+ASAARELLNKS NERSGVLSTAMSFLGLYRDPVVAEVTR CDWRITDIV TTLY Sbjct: 304 VIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRITDIVTARHPTTLY 363 Query: 299 LVVPPSDINRTKPLIRLILNQIGRRLTEDLQAKAGRRRLLLMLDEFPALGRLDFFESALA 358 LVVPPSDINRTKPLIRLILNQ+GRRLTEDLQAKAGR RLLLMLDEFPALGRLDFFESALA Sbjct: 364 LVVPPSDINRTKPLIRLILNQVGRRLTEDLQAKAGRHRLLLMLDEFPALGRLDFFESALA 423 Query: 359 FMAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTATEM 418 FMAGYG+KSFLIAQSLNQIEKAYG NNSILDNCHVRVSFATNDERTAKRVSDALGTATEM Sbjct: 424 FMAGYGLKSFLIAQSLNQIEKAYGANNSILDNCHVRVSFATNDERTAKRVSDALGTATEM 483 Query: 419 KAMKNYAGSRLAPWLGHLMVSRSETARPLLTPGEMMQLPPSDEIVMMSGLHPIRAKKARY 478 KAM+NYAG RL+PWLGHLMVSRSETAR LLTPGE+MQLPPSDEIVM++G PIRAKKARY Sbjct: 484 KAMRNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKKARY 543 Query: 479 YEDRRFQERIMAPPMLTKSNGGRLDDWSSRPLPPRPRALETLNDDQTDDEDPKAADRRQQ 538 YED RF+ERI+ PP L GR DDW++ PLP RP E + + DEDP A++RRQQ Sbjct: 544 YEDARFKERILPPPALVVPKQGRPDDWTALPLPLRPETAEPGSAAEASDEDPTASERRQQ 603 Query: 539 PELDR-DTVENKEPLENEFASDLVDELDEDVPRIRRMNDMMQGVARQASLDPGDDLGL 595 PEL+R + VE K P+ENEF L DE ++D R RMN +MQGVARQ SLDPGD + L Sbjct: 604 PELNRLEPVEKKAPVENEFEIGLADEAEDDPVRNSRMNRLMQGVARQVSLDPGDGMEL 661 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Oct 2, 2011 4:36 PM Number of letters in database: 5,307,515,862 Number of sequences in database: 15,459,386 Lambda K H 0.317 0.133 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 15459386 Number of Hits to DB: 22,168,275,558,747 Number of extensions: 1736688438 Number of successful extensions: -1646211618 Number of sequences better than 10.0: 65146037 Number of HSP's gapped: -1720407372 Number of HSP's successfully gapped: 99656641 Length of database: 5,307,515,862 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 76 (33.9 bits)