BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0260.0015.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_766682.1| hypothetical protein bll0042 [Bradyrhizobium ja...   289   1e-76
ref|ZP_07026215.1| conserved hypothetical protein [Afipia sp. 1N...   224   5e-57
ref|YP_002277166.1| hypothetical protein Gdia_2819 [Gluconacetob...   220   4e-56
ref|YP_001412473.1| hypothetical protein Plav_1195 [Parvibaculum...   218   3e-55
ref|ZP_03530238.1| hypothetical protein RetlC8_27828 [Rhizobium ...   212   2e-53

>ref|NP_766682.1| hypothetical protein bll0042 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45307.1| bll0042 [Bradyrhizobium japonicum USDA 110]
          Length = 146

 Score =  289 bits (739), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MIGTKKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKR 60
           MIGTKKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKR
Sbjct: 1   MIGTKKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKR 60

Query: 61  LDQIDRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALG 120
           LDQIDRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALG
Sbjct: 61  LDQIDRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALG 120

Query: 121 RRLNQGPKLRQEIPEDAQQTDSSPGE 146
           RRLNQGPKLRQEIPEDAQQTDSSPGE
Sbjct: 121 RRLNQGPKLRQEIPEDAQQTDSSPGE 146


>ref|ZP_07026215.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI53357.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 148

 Score =  224 bits (570), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 119/144 (82%), Positives = 131/144 (90%)

Query: 1   MIGTKKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKR 60
           M   KKKAQ+SVYLDPDVM++L+AYAARREQ +SLIAEAAIASFLSPDADERREAA AKR
Sbjct: 1   MPTPKKKAQISVYLDPDVMRSLAAYAARREQPMSLIAEAAIASFLSPDADERREAAIAKR 60

Query: 61  LDQIDRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALG 120
           LDQ DRR+ARLERDVGI++ET+ALFIRFWLTTTPSLPEPAAKAARAQAG RYDNF+AALG
Sbjct: 61  LDQQDRRLARLERDVGIAIETLALFIRFWLTTTPSLPEPAAKAARAQAGTRYDNFVAALG 120

Query: 121 RRLNQGPKLRQEIPEDAQQTDSSP 144
           RRL+QGPKLRQEIPED  +    P
Sbjct: 121 RRLSQGPKLRQEIPEDMPEKSEGP 144


>ref|YP_002277166.1| hypothetical protein Gdia_2819 [Gluconacetobacter diazotrophicus
           PAl 5]
 gb|ACI52551.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 143

 Score =  220 bits (561), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/138 (86%), Positives = 130/138 (94%)

Query: 5   KKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKRLDQI 64
           KKKAQLSVYLDP+VM++L+AYAARREQS+SLIAEAAIASFLSPDADERREAA AKRLDQ 
Sbjct: 3   KKKAQLSVYLDPEVMQSLAAYAARREQSMSLIAEAAIASFLSPDADERREAAIAKRLDQQ 62

Query: 65  DRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALGRRLN 124
           DRR+ARLERDVGI VET+ALFIRFWL TTP LPEPAAKAARAQAGARYDNF+A LGRRLN
Sbjct: 63  DRRLARLERDVGIGVETLALFIRFWLNTTPPLPEPAAKAARAQAGARYDNFVATLGRRLN 122

Query: 125 QGPKLRQEIPEDAQQTDS 142
           +GPKLRQEIPED +Q+ S
Sbjct: 123 EGPKLRQEIPEDVEQSQS 140


>ref|YP_001412473.1| hypothetical protein Plav_1195 [Parvibaculum lavamentivorans DS-1]
 ref|YP_001414795.1| hypothetical protein Plav_3540 [Parvibaculum lavamentivorans DS-1]
 gb|ABS62816.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
 gb|ABS65138.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
          Length = 149

 Score =  218 bits (554), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 121/146 (82%)

Query: 1   MIGTKKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKR 60
           M G KKK  +SVYLDPD+M  LS YA RREQ LSLIAEAAIASFLSPD  ERREA  AKR
Sbjct: 1   MTGRKKKVPISVYLDPDIMATLSDYAGRREQPLSLIAEAAIASFLSPDDAERREAVVAKR 60

Query: 61  LDQIDRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALG 120
           LDQIDRR+ R+ERD+GISVET+A+FIRFWL TTP+LPEPAA+AARA  G RY+ F+AALG
Sbjct: 61  LDQIDRRLNRMERDIGISVETMAVFIRFWLNTTPALPEPAAQAARAMVGKRYEAFIAALG 120

Query: 121 RRLNQGPKLRQEIPEDAQQTDSSPGE 146
           RRL QGPKLRQEI ED  ++ SSP E
Sbjct: 121 RRLAQGPKLRQEIVEDVGESPSSPTE 146


>ref|ZP_03530238.1| hypothetical protein RetlC8_27828 [Rhizobium etli CIAT 894]
          Length = 144

 Score =  212 bits (539), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 104/136 (76%), Positives = 120/136 (88%)

Query: 1   MIGTKKKAQLSVYLDPDVMKALSAYAARREQSLSLIAEAAIASFLSPDADERREAATAKR 60
           M+   KK +LSVYLDPDVMKAL+A+AARR+QSLSLIAEA IASFLSPDA ER+EAAT KR
Sbjct: 1   MVKAPKKQRLSVYLDPDVMKALTAHAARRDQSLSLIAEAGIASFLSPDAAERQEAATTKR 60

Query: 61  LDQIDRRIARLERDVGISVETIALFIRFWLTTTPSLPEPAAKAARAQAGARYDNFLAALG 120
           LDQ+DRR+AR+ERD+GISVET+A+F+RFWLTT P LPEPA  AARA+AG RY+ F+ ALG
Sbjct: 61  LDQLDRRMARMERDLGISVETLAVFVRFWLTTNPPLPEPAQVAARAKAGERYEAFVTALG 120

Query: 121 RRLNQGPKLRQEIPED 136
           RRL QGPKLRQEI ED
Sbjct: 121 RRLAQGPKLRQEISED 136