BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0260.0001.p         (80 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774860.1| transposase [Bradyrhizobium japonicum USDA 110]...   124   3e-27
ref|NP_768281.1| transposase [Bradyrhizobium japonicum USDA 110]...   124   4e-27
ref|NP_768350.1| transposase [Bradyrhizobium japonicum USDA 110]...   123   8e-27
ref|NP_106609.1| transposase [Mesorhizobium loti MAFF303099] >gi...   123   9e-27
ref|YP_001672186.1| IstB ATP binding domain-containing protein [...   121   3e-26

>ref|NP_774860.1| transposase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53485.1| blr8220 [Bradyrhizobium japonicum USDA 110]
          Length = 253

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 66/76 (86%)

Query: 1   MKAPRGLDKPLFQKLVAGEWIDRHQNLLIIGPTGVCKSWIACALGHKACRDNRSVLCQRL 60
           ++ PRG+D+ +F KLV G WIDRH+NLL+ G TG+ KSW+ACALGHKACRDNRSVL  R+
Sbjct: 76  LRTPRGIDRAVFAKLVEGRWIDRHENLLVTGATGLGKSWLACALGHKACRDNRSVLYHRV 135

Query: 61  PRLFEALALARGDGRW 76
           PRLFEALALARGDGR+
Sbjct: 136 PRLFEALALARGDGRY 151


>ref|NP_768281.1| transposase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46906.1| bll1641 [Bradyrhizobium japonicum USDA 110]
          Length = 236

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 66/76 (86%)

Query: 1   MKAPRGLDKPLFQKLVAGEWIDRHQNLLIIGPTGVCKSWIACALGHKACRDNRSVLCQRL 60
           ++ PRG+D+ +F KLV G WIDRH+NLL+ G TG+ KSW+ACALGHKACRDNRSVL  R+
Sbjct: 59  LRTPRGIDRAVFAKLVEGRWIDRHENLLVTGATGLGKSWLACALGHKACRDNRSVLYHRV 118

Query: 61  PRLFEALALARGDGRW 76
           PRLFEALALARGDGR+
Sbjct: 119 PRLFEALALARGDGRY 134


>ref|NP_768350.1| transposase [Bradyrhizobium japonicum USDA 110]
 ref|NP_768475.1| transposase [Bradyrhizobium japonicum USDA 110]
 gb|AAG60818.1|AF322012_123 ID259 [Bradyrhizobium japonicum]
 dbj|BAC46975.1| bll1710 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47100.1| blr1835 [Bradyrhizobium japonicum USDA 110]
          Length = 243

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 66/76 (86%)

Query: 1   MKAPRGLDKPLFQKLVAGEWIDRHQNLLIIGPTGVCKSWIACALGHKACRDNRSVLCQRL 60
           ++ PRG+D+ +F KLV G WIDRH+NLL+ G TG+ KSW+ACALGHKACRDNRSVL  R+
Sbjct: 59  LRTPRGIDRAVFAKLVEGRWIDRHENLLVTGATGLGKSWLACALGHKACRDNRSVLYHRV 118

Query: 61  PRLFEALALARGDGRW 76
           PRLFEALALARGDGR+
Sbjct: 119 PRLFEALALARGDGRY 134


>ref|NP_106609.1| transposase [Mesorhizobium loti MAFF303099]
 dbj|BAB52395.1| transposase [Mesorhizobium loti MAFF303099]
          Length = 167

 Score =  123 bits (309), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 67/76 (88%)

Query: 1   MKAPRGLDKPLFQKLVAGEWIDRHQNLLIIGPTGVCKSWIACALGHKACRDNRSVLCQRL 60
           ++ PRG+D+ +F +LVAG+WIDRH+N L+ G TG+ KSW+ACALGHKACRDNRSVL  R+
Sbjct: 76  LRTPRGIDRAVFARLVAGDWIDRHENCLVTGATGLGKSWLACALGHKACRDNRSVLYHRV 135

Query: 61  PRLFEALALARGDGRW 76
           PRLFEALALARGDGR+
Sbjct: 136 PRLFEALALARGDGRY 151


>ref|YP_001672186.1| IstB ATP binding domain-containing protein [Caulobacter sp. K31]
 gb|ABZ74527.1| IstB domain protein ATP-binding protein [Caulobacter sp. K31]
          Length = 252

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/75 (76%), Positives = 64/75 (85%)

Query: 1   MKAPRGLDKPLFQKLVAGEWIDRHQNLLIIGPTGVCKSWIACALGHKACRDNRSVLCQRL 60
           ++ PRGLD+ L  +LVAG+WIDR QN LI GPTGV KSW+ACALGHKACRD RSV  QR+
Sbjct: 76  LRTPRGLDRTLLARLVAGDWIDRRQNCLITGPTGVGKSWLACALGHKACRDGRSVFYQRV 135

Query: 61  PRLFEALALARGDGR 75
           PRLFEALALARGDGR
Sbjct: 136 PRLFEALALARGDGR 150