BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0259.0002.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG60702.1|AF322012_7 ModB [Bradyrhizobium japonicum] 299 2e-79 ref|NP_768359.1| molybdenum transport system permease protein [B... 299 3e-79 ref|NP_773592.1| molybdenum ABC transporter permease protein [Br... 281 4e-74 ref|NP_950050.1| molybdate ABC transporter permease [Rhodopseudo... 280 2e-73 ref|YP_004111165.1| molybdate ABC transporter inner membrane sub... 278 4e-73 >gb|AAG60702.1|AF322012_7 ModB [Bradyrhizobium japonicum] Length = 222 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/201 (75%), Positives = 174/201 (86%), Gaps = 2/201 (0%) Query: 1 MDALSPEIWQSVALTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPP 60 MD S EI QS+ALT+ELASVTT+ILLVIG PLAWWLARSKT LSEAVA ++ALPLVLPP Sbjct: 20 MDFDSSEISQSIALTIELASVTTVILLVIGVPLAWWLARSKTFLSEAVAALIALPLVLPP 79 Query: 61 TALGFCVLVLLGPNGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMG 120 ALGFCVLVLLGP+GPGG+LASFWGE TLA TF GIVVGSVLSALPLVVQPIR+AF+A+G Sbjct: 80 AALGFCVLVLLGPDGPGGVLASFWGERTLALTFVGIVVGSVLSALPLVVQPIRNAFLAVG 139 Query: 121 NHPQEVVASQRVSALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTK 180 +HP E+ + RVS L+ F+ + PLARLE +KA ++GF+HTIGTFGVVMMIGGNIPGRTK Sbjct: 140 DHPLEM--TGRVSPLYGFVAIIAPLARLELVKAAVLGFSHTIGTFGVVMMIGGNIPGRTK 197 Query: 181 VLSAYVIDYVQASRWREAGWV 201 VLSAYV+DYVQ RW E W+ Sbjct: 198 VLSAYVVDYVQEPRWHEEVWL 218 >ref|NP_768359.1| molybdenum transport system permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46984.1| molybdenum transport system permease protein [Bradyrhizobium japonicum USDA 110] Length = 203 Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 152/201 (75%), Positives = 174/201 (86%), Gaps = 2/201 (0%) Query: 1 MDALSPEIWQSVALTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPP 60 MD S EI QS+ALT+ELASVTT+ILLVIG PLAWWLARSKT LSEAVA ++ALPLVLPP Sbjct: 1 MDFDSSEISQSIALTIELASVTTVILLVIGVPLAWWLARSKTFLSEAVAALIALPLVLPP 60 Query: 61 TALGFCVLVLLGPNGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMG 120 ALGFCVLVLLGP+GPGG+LASFWGE TLA TF GIVVGSVLSALPLVVQPIR+AF+A+G Sbjct: 61 AALGFCVLVLLGPDGPGGVLASFWGERTLALTFVGIVVGSVLSALPLVVQPIRNAFLAVG 120 Query: 121 NHPQEVVASQRVSALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTK 180 +HP E+ + RVS L+ F+ + PLARLE +KA ++GF+HTIGTFGVVMMIGGNIPGRTK Sbjct: 121 DHPLEM--TGRVSPLYGFVAIIAPLARLELVKAAVLGFSHTIGTFGVVMMIGGNIPGRTK 178 Query: 181 VLSAYVIDYVQASRWREAGWV 201 VLSAYV+DYVQ RW E W+ Sbjct: 179 VLSAYVVDYVQEPRWHEEVWL 199 >ref|NP_773592.1| molybdenum ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52217.1| molybdenum ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 142/225 (63%), Positives = 176/225 (78%) Query: 1 MDALSPEIWQSVALTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPP 60 M+ S EI QSV LTVELA+++T ILLV+ PLAWWLAR+K +E +A++VALPLVLPP Sbjct: 1 MEIWSTEIRQSVLLTVELAAISTAILLVLATPLAWWLARAKGWWTEIIASIVALPLVLPP 60 Query: 61 TALGFCVLVLLGPNGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMG 120 T LGF +LVLLGP GPGG +A WG TLAFTF G+++GSV+ ++P VVQPIR+AF AMG Sbjct: 61 TVLGFYLLVLLGPEGPGGWIAQLWGGRTLAFTFEGLIIGSVVYSMPFVVQPIRNAFTAMG 120 Query: 121 NHPQEVVASQRVSALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTK 180 P EV A+ R S AF T+ +PLAR FL ++GFAHT+G FG+V+MIGGNIPGRTK Sbjct: 121 ERPLEVAATLRASPWHAFWTIAVPLARPGFLTGAVLGFAHTVGEFGLVLMIGGNIPGRTK 180 Query: 181 VLSAYVIDYVQASRWREAGWVAGGMVMFAFAVMFTLTLIDKRCAR 225 VLS + DYV+ASRWREA +AGGMV+FAFAV+ T+TLID+ AR Sbjct: 181 VLSVAIFDYVEASRWREASLLAGGMVIFAFAVILTMTLIDRHSAR 225 >ref|NP_950050.1| molybdate ABC transporter permease [Rhodopseudomonas palustris CGA009] ref|YP_001994160.1| molybdate ABC transporter inner membrane subunit [Rhodopseudomonas palustris TIE-1] emb|CAE30156.1| molybdate transport system permease protein [Rhodopseudomonas palustris CGA009] gb|ACF03685.1| molybdate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris TIE-1] Length = 228 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 137/225 (60%), Positives = 174/225 (77%) Query: 1 MDALSPEIWQSVALTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPP 60 M L P+IWQ V LT+ELA++TT+ILL++G P+AWWLARSK E +A +VALPLVLPP Sbjct: 1 MTNLPPDIWQPVRLTIELAAITTLILLIVGTPIAWWLARSKAWWKEGIAAVVALPLVLPP 60 Query: 61 TALGFCVLVLLGPNGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMG 120 T LGF +LVL+GP+GPGG LAS WG T+AFTF G+V GSV+ ++P VVQPIR+AF A+G Sbjct: 61 TVLGFYLLVLMGPDGPGGALASLWGGRTVAFTFGGLVFGSVIYSMPFVVQPIRNAFDAIG 120 Query: 121 NHPQEVVASQRVSALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTK 180 + P EV A+ R S L AF TV +PLAR FL ++GFAHT+G FG+V+MIGGNIPG TK Sbjct: 121 DRPLEVAATLRASPLKAFWTVAMPLARPGFLAGAVLGFAHTVGEFGIVLMIGGNIPGSTK 180 Query: 181 VLSAYVIDYVQASRWREAGWVAGGMVMFAFAVMFTLTLIDKRCAR 225 VLS + DYV+ S+WREA +AGGM FAF V+ T+ +++KR AR Sbjct: 181 VLSVAIYDYVETSQWREANILAGGMAAFAFVVILTMMMLEKRTAR 225 >ref|YP_004111165.1| molybdate ABC transporter inner membrane subunit [Rhodopseudomonas palustris DX-1] gb|ADU46432.1| molybdate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris DX-1] Length = 228 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 139/225 (61%), Positives = 173/225 (76%) Query: 1 MDALSPEIWQSVALTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPP 60 M L P+IWQ V LT+ELA++TT+ILL++G P+AWWLARSK E VA +VALPLVLPP Sbjct: 1 MTNLPPDIWQPVWLTIELAAITTVILLIVGTPIAWWLARSKVWWKEGVAAVVALPLVLPP 60 Query: 61 TALGFCVLVLLGPNGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMG 120 T LGF +LVL+GP+GPGG LAS WG TLAFTF G+V GSV+ ++P VVQPIR+AF A+G Sbjct: 61 TVLGFYLLVLMGPDGPGGALASLWGGRTLAFTFGGLVFGSVIYSMPFVVQPIRNAFDAIG 120 Query: 121 NHPQEVVASQRVSALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTK 180 + P EV A+ R S L AF TV +PLAR FL ++GFAHT+G FG+V+MIGGNIPG TK Sbjct: 121 DRPLEVAATLRASPLKAFWTVAVPLARPGFLAGAVLGFAHTVGEFGIVLMIGGNIPGSTK 180 Query: 181 VLSAYVIDYVQASRWREAGWVAGGMVMFAFAVMFTLTLIDKRCAR 225 VLS + DYV+ S+WREA +AGGM FAF V+ T+ ++KR AR Sbjct: 181 VLSVAIYDYVETSQWREANILAGGMAAFAFVVILTMMTLEKRTAR 225