BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0259.0001.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769032.1| dioxygenase subunit [Bradyrhizobium japonicum U... 258 2e-67 ref|YP_001993112.1| oxidoreductase FAD/NAD(P)-binding domain-con... 236 8e-61 ref|NP_948959.1| putative vanillate O-demethylase oxidoreductase... 233 6e-60 ref|YP_485525.1| vanillate O-demethylase oxidoreductase [Rhodops... 232 1e-59 ref|YP_001203977.1| putative oxydoreductase [Bradyrhizobium sp. ... 230 5e-59 >ref|NP_769032.1| dioxygenase subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC47657.1| blr2392 [Bradyrhizobium japonicum USDA 110] Length = 326 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/173 (71%), Positives = 146/173 (84%) Query: 1 LDVLAPLLNKRLIVHAGNEGRRLNLDDLFASLPRDALTLLCGPIRMLDAARRAWTGAGRA 60 LD LA +L RL+VHA +EGRRL+LD LFASLP+ AL L CGP+RMLDAAR AW GAG Sbjct: 154 LDDLAGMLGDRLVVHASDEGRRLDLDALFASLPQGALALFCGPMRMLDAARHAWIGAGHP 213 Query: 61 LSDLRYETFGSSGSLPTEGFRVRLADQAIEIEIPRDRSLLDVLNGAGYEVISDCRRGECG 120 L DLRYETFGSSG+LPTE FRVRL D IE+EIPR+RS+LDVLN +G++V+ DC+RGECG Sbjct: 214 LPDLRYETFGSSGTLPTETFRVRLKDTDIELEIPRERSMLDVLNASGHDVMYDCKRGECG 273 Query: 121 VCAIDLVKIDGELDHRDVFFSEQQKHANEKICACVSRARGMITVDILHRPDAL 173 +CAID+V +DGE+DHRDVFFS+ QK +N+KICACVSRARG ITVD L R DA+ Sbjct: 274 LCAIDVVDVDGEIDHRDVFFSDHQKQSNQKICACVSRARGTITVDTLLRADAI 326 >ref|YP_001993112.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF02637.1| oxidoreductase FAD/NAD(P)-binding domain protein [Rhodopseudomonas palustris TIE-1] Length = 330 Score = 236 bits (603), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 112/172 (65%), Positives = 135/172 (78%) Query: 2 DVLAPLLNKRLIVHAGNEGRRLNLDDLFASLPRDALTLLCGPIRMLDAARRAWTGAGRAL 61 D L+ LL RL +HAG+EG RL+LD F +LP A+ +LCGP+RML+AAR AW AGR Sbjct: 154 DELSSLLGDRLRLHAGDEGARLDLDTTFRALPEGAVAVLCGPLRMLEAARHAWHQAGRPA 213 Query: 62 SDLRYETFGSSGSLPTEGFRVRLADQAIEIEIPRDRSLLDVLNGAGYEVISDCRRGECGV 121 SDL +ETFGSSG LPT FRVR+A EI +PRDRS+LD LN AG+EVISDC RGECGV Sbjct: 214 SDLCFETFGSSGRLPTSEFRVRIAATGSEIVVPRDRSMLDALNAAGFEVISDCERGECGV 273 Query: 122 CAIDLVKIDGELDHRDVFFSEQQKHANEKICACVSRARGMITVDILHRPDAL 173 CA+D+ I+GE+DHRDVFFSE QKH + K+CACVSRARG +T+D L+RPD L Sbjct: 274 CAVDVTAIEGEIDHRDVFFSEHQKHDSGKMCACVSRARGTVTIDTLYRPDQL 325 >ref|NP_948959.1| putative vanillate O-demethylase oxidoreductase [Rhodopseudomonas palustris CGA009] emb|CAE29062.1| putative vanillate O-demethylase oxidoreductase [Rhodopseudomonas palustris CGA009] Length = 330 Score = 233 bits (595), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 111/172 (64%), Positives = 134/172 (77%) Query: 2 DVLAPLLNKRLIVHAGNEGRRLNLDDLFASLPRDALTLLCGPIRMLDAARRAWTGAGRAL 61 D L+ LL RL +HAG+E RL+LD F +LP A+ +LCGP+RML+AAR AW AGR Sbjct: 154 DELSSLLGDRLRLHAGDEDARLDLDATFRALPEGAVAVLCGPLRMLEAARHAWHQAGRPA 213 Query: 62 SDLRYETFGSSGSLPTEGFRVRLADQAIEIEIPRDRSLLDVLNGAGYEVISDCRRGECGV 121 SDL +ETFGSSG LPT FRVR+A EI +PRDRS+LD LN AG+EVISDC RGECGV Sbjct: 214 SDLCFETFGSSGRLPTSEFRVRIAATGSEIVVPRDRSMLDALNAAGFEVISDCERGECGV 273 Query: 122 CAIDLVKIDGELDHRDVFFSEQQKHANEKICACVSRARGMITVDILHRPDAL 173 CA+D+ I+GE+DHRDVFFSE QKH + K+CACVSRARG +T+D L+RPD L Sbjct: 274 CAVDVTAIEGEIDHRDVFFSEHQKHDSGKMCACVSRARGTVTIDTLYRPDQL 325 >ref|YP_485525.1| vanillate O-demethylase oxidoreductase [Rhodopseudomonas palustris HaA2] gb|ABD06614.1| vanillate O-demethylase oxidoreductase [Rhodopseudomonas palustris HaA2] Length = 330 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/170 (63%), Positives = 135/170 (79%) Query: 4 LAPLLNKRLIVHAGNEGRRLNLDDLFASLPRDALTLLCGPIRMLDAARRAWTGAGRALSD 63 LA LL RL++HA + G+RL+LD F +LP DA+ ++CGP+RMLDAAR+AW AGR +D Sbjct: 156 LADLLGDRLLLHAADVGKRLDLDATFRALPADAIAVVCGPLRMLDAARQAWRDAGRRPTD 215 Query: 64 LRYETFGSSGSLPTEGFRVRLADQAIEIEIPRDRSLLDVLNGAGYEVISDCRRGECGVCA 123 L +ETFGSSG LPT FRVR+A EI +PRDRS+LD LN AGYEVISDC+RGECGVCA Sbjct: 216 LCFETFGSSGRLPTSDFRVRIASTGNEIMVPRDRSMLDALNAAGYEVISDCQRGECGVCA 275 Query: 124 IDLVKIDGELDHRDVFFSEQQKHANEKICACVSRARGMITVDILHRPDAL 173 +D+ ++GE+DHRDVFFS +K + K+CACVSRARG +TVD L+RPD L Sbjct: 276 VDVTTVEGEIDHRDVFFSAHEKQTSAKMCACVSRARGTVTVDTLYRPDQL 325 >ref|YP_001203977.1| putative oxydoreductase [Bradyrhizobium sp. ORS 278] emb|CAL75740.1| putative Oxydoreductase [Bradyrhizobium sp. ORS 278] Length = 326 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 110/172 (63%), Positives = 134/172 (77%) Query: 2 DVLAPLLNKRLIVHAGNEGRRLNLDDLFASLPRDALTLLCGPIRMLDAARRAWTGAGRAL 61 D LA LL RL V+A ++ +RL+L LFA LP L CGP+RMLDAAR AW +GRA Sbjct: 155 DELATLLGGRLAVYAADQSQRLDLAGLFAGLPAGTAVLFCGPMRMLDAARSAWAASGRAP 214 Query: 62 SDLRYETFGSSGSLPTEGFRVRLADQAIEIEIPRDRSLLDVLNGAGYEVISDCRRGECGV 121 +DL YETFGSSG L TE F+VRL EI +PRDRS+LDVLN AG+EV++DCRRGECGV Sbjct: 215 ADLSYETFGSSGRLSTEPFKVRLRGSGEEIVVPRDRSMLDVLNAAGHEVMADCRRGECGV 274 Query: 122 CAIDLVKIDGELDHRDVFFSEQQKHANEKICACVSRARGMITVDILHRPDAL 173 CAID+V++DGE+DHRDVFFS +QKH + K+CACVSRA G++T+D L R DAL Sbjct: 275 CAIDVVEVDGEIDHRDVFFSAEQKHESRKLCACVSRAHGVVTIDTLERADAL 326