BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0258.0043.p         (168 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004110045.1| hypothetical protein Rpdx1_3747 [Rhodopseudo...   209   1e-52
ref|YP_001990985.1| hypothetical protein Rpal_1987 [Rhodopseudom...   208   2e-52
ref|NP_947130.1| hypothetical protein RPA1785 [Rhodopseudomonas ...   204   3e-51
ref|YP_487185.1| hypothetical protein RPB_3579 [Rhodopseudomonas...   204   5e-51
pdb|3C5O|A Chain A, Crystal Structure Of The Conserved Protein O...   201   3e-50

>ref|YP_004110045.1| hypothetical protein Rpdx1_3747 [Rhodopseudomonas palustris DX-1]
 gb|ADU45312.1| hypothetical protein Rpdx1_3747 [Rhodopseudomonas palustris DX-1]
          Length = 153

 Score =  209 bits (532), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/117 (84%), Positives = 108/117 (92%)

Query: 52  IGGEVRGEKVNGKVLSFGADFQIIRPDELIELEAKYAFETDDGAVVYVENKGIRFGPGEL 111
           +GGEV+GE + G+VL FGADFQIIRP+ELIELEA+YAFETDDGAVVYVEN GIRFGP EL
Sbjct: 37  LGGEVKGEGIRGRVLPFGADFQIIRPNELIELEARYAFETDDGAVVYVENAGIRFGPVEL 96

Query: 112 LQKLKRGEPVDPKLIYFRTVPKFETGAENYRWLMQHIFVGSAARHVDRVVIDVHQVL 168
           LQKLKRGEPVDPKLIYFRT P+FETG  NY+WLMQH+FVGSAARH DRVVIDVHQVL
Sbjct: 97  LQKLKRGEPVDPKLIYFRTRPRFETGHPNYQWLMQHLFVGSAARHADRVVIDVHQVL 153


>ref|YP_001990985.1| hypothetical protein Rpal_1987 [Rhodopseudomonas palustris TIE-1]
 sp|B3Q9N8.1|Y1987_RHOPT RecName: Full=UPF0311 protein Rpal_1987
 gb|ACF00510.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 153

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/117 (84%), Positives = 108/117 (92%)

Query: 52  IGGEVRGEKVNGKVLSFGADFQIIRPDELIELEAKYAFETDDGAVVYVENKGIRFGPGEL 111
           +GGEV+GE ++GKVL FGADFQIIRP+ELIELEAKYAFETDDGAVVYVEN GIRFGP EL
Sbjct: 37  LGGEVKGEGISGKVLPFGADFQIIRPNELIELEAKYAFETDDGAVVYVENAGIRFGPVEL 96

Query: 112 LQKLKRGEPVDPKLIYFRTVPKFETGAENYRWLMQHIFVGSAARHVDRVVIDVHQVL 168
           LQKLK GEPVDPKLIYFRT P+FETG  NY+WLMQH+F+GSAARH DRVVIDVHQVL
Sbjct: 97  LQKLKCGEPVDPKLIYFRTRPRFETGHPNYQWLMQHLFIGSAARHADRVVIDVHQVL 153


>ref|NP_947130.1| hypothetical protein RPA1785 [Rhodopseudomonas palustris CGA009]
 sp|P61167.1|Y1785_RHOPA RecName: Full=UPF0311 protein RPA1785
 emb|CAE27226.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 153

 Score =  204 bits (520), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 109/117 (93%)

Query: 52  IGGEVRGEKVNGKVLSFGADFQIIRPDELIELEAKYAFETDDGAVVYVENKGIRFGPGEL 111
           +GGEV+GE ++G+VL FGADFQIIRP+ELIELEAKYAFETDDGAVVYVEN GIRFGP EL
Sbjct: 37  LGGEVKGEGISGQVLPFGADFQIIRPNELIELEAKYAFETDDGAVVYVENVGIRFGPVEL 96

Query: 112 LQKLKRGEPVDPKLIYFRTVPKFETGAENYRWLMQHIFVGSAARHVDRVVIDVHQVL 168
           L+KLKRGEPVDPK+IYFRT P+FETG  NY+WLMQ++FVGSAARH DRVVIDVHQVL
Sbjct: 97  LRKLKRGEPVDPKVIYFRTRPRFETGHPNYQWLMQYLFVGSAARHADRVVIDVHQVL 153


>ref|YP_487185.1| hypothetical protein RPB_3579 [Rhodopseudomonas palustris HaA2]
 gb|ABD08274.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 153

 Score =  204 bits (518), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 103/143 (72%), Positives = 117/143 (81%), Gaps = 1/143 (0%)

Query: 26  NIVKRQALVLGFSDTFAVIGIVLVFXIGGEVRGEKVNGKVLSFGADFQIIRPDELIELEA 85
            I  R   V+   DT A +  V+   IGGEV+GE ++G+VL+ GADFQIIRP+ELIELEA
Sbjct: 12  TITARIGEVISAGDTGAGVRRVIPV-IGGEVKGEGISGRVLASGADFQIIRPNELIELEA 70

Query: 86  KYAFETDDGAVVYVENKGIRFGPGELLQKLKRGEPVDPKLIYFRTVPKFETGAENYRWLM 145
           KYAFETDDGAV+YVEN GIRFGP ELLQKLKRGEPVDPKLIYFRT P+FETG  NY+WL 
Sbjct: 71  KYAFETDDGAVIYVENVGIRFGPVELLQKLKRGEPVDPKLIYFRTRPRFETGHPNYQWLT 130

Query: 146 QHIFVGSAARHVDRVVIDVHQVL 168
            H+F+GSAARH DRVVIDVHQVL
Sbjct: 131 THLFIGSAARHADRVVIDVHQVL 153


>pdb|3C5O|A Chain A, Crystal Structure Of The Conserved Protein Of Unknown
           Function Rpa1785 From Rhodopseudomonas Palustris
 pdb|3C5O|B Chain B, Crystal Structure Of The Conserved Protein Of Unknown
           Function Rpa1785 From Rhodopseudomonas Palustris
 pdb|3C5O|C Chain C, Crystal Structure Of The Conserved Protein Of Unknown
           Function Rpa1785 From Rhodopseudomonas Palustris
 pdb|3C5O|D Chain D, Crystal Structure Of The Conserved Protein Of Unknown
           Function Rpa1785 From Rhodopseudomonas Palustris
          Length = 157

 Score =  201 bits (511), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/117 (82%), Positives = 108/117 (92%)

Query: 52  IGGEVRGEKVNGKVLSFGADFQIIRPDELIELEAKYAFETDDGAVVYVENKGIRFGPGEL 111
           +GGEV+GE ++G+VL FGADFQIIRP+ELIELEAKYAFETDDGAVVYVEN GIRFGP EL
Sbjct: 39  LGGEVKGEGISGQVLPFGADFQIIRPNELIELEAKYAFETDDGAVVYVENVGIRFGPVEL 98

Query: 112 LQKLKRGEPVDPKLIYFRTVPKFETGAENYRWLMQHIFVGSAARHVDRVVIDVHQVL 168
           L+KLKRGEPVDPK+IYFRT P+FETG  NY+WL Q++FVGSAARH DRVVIDVHQVL
Sbjct: 99  LRKLKRGEPVDPKVIYFRTRPRFETGHPNYQWLXQYLFVGSAARHADRVVIDVHQVL 155