BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0038.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774478.1| 4-hydroxybenzoate 3-monooxygenase [Bradyrhizobi... 665 0.0 ref|NP_947126.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudom... 621 e-176 ref|YP_004110049.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseu... 618 e-175 ref|YP_001990981.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseu... 616 e-174 ref|YP_782717.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudom... 615 e-174 >ref|NP_774478.1| 4-hydroxybenzoate 3-monooxygenase [Bradyrhizobium japonicum USDA 110] dbj|BAC53103.1| 4-hydroxybenzoate hydroxylase [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/389 (80%), Positives = 344/389 (88%) Query: 1 LRTKVAIIGAGPAGLLLGQLLHTFGVDNIILERQTPDYVLGRIRAGLLEEGTVSLLESVG 60 +RTKVAIIGAGPAGLLLGQLLH +G+DN ILERQ+PDYVLGRIRAGLLEEGTV+LL+ VG Sbjct: 1 MRTKVAIIGAGPAGLLLGQLLHNYGIDNFILERQSPDYVLGRIRAGLLEEGTVALLDQVG 60 Query: 61 AAARLHQEGLVHHGLELAFGGARHRIDLHGSTGKTVTIYGQTEVTLDLMNARKAAGLTSI 120 A R H EGLVH G+ELAF G RHRID+ +TGKTV IYGQTEVTLDLMNARKAAGL ++ Sbjct: 61 AGVRAHAEGLVHEGIELAFSGRRHRIDMKAATGKTVMIYGQTEVTLDLMNARKAAGLDTV 120 Query: 121 YSAADVKPLDSDTEHPRVSYVKDGVTREIACDFIAGCDGFHGISRASVPASAITSYERVY 180 Y A DV+P D D HPRV++V+DGVT + CDFIAGCDGFHG+SRASVPASAI +ERVY Sbjct: 121 YEAKDVRPHDFDGSHPRVTWVRDGVTHTLDCDFIAGCDGFHGVSRASVPASAIEEFERVY 180 Query: 181 PFGWLGILSETPPVSPELIYNNHERGFALCTMRSSHRSRYYVQCPLDDHVDQWSDERFWD 240 PFGWLGILSETPPVS ELIY+NH GFALCTMRS RSRYYVQC LDDHVDQW D+RFWD Sbjct: 181 PFGWLGILSETPPVSHELIYSNHALGFALCTMRSMKRSRYYVQCSLDDHVDQWPDDRFWD 240 Query: 241 ELKRRLDQKAADEIVTGPSIEKSIAPLRSFVAEPMRFGRMFLAGDASHIVPPTGAKGLNL 300 ELKRRLDQ+AAD +VTGPSIEKSIAPLRSFVAEPMRFG+MFL GDA+HIVPPTGAKGLNL Sbjct: 241 ELKRRLDQEAADSLVTGPSIEKSIAPLRSFVAEPMRFGKMFLCGDAAHIVPPTGAKGLNL 300 Query: 301 AASDVHYLSQALREYYHEKSSAGLDGYSAKALARVWKAVRFSWWMTSMLHKFPDEGEFAA 360 AASD HYLS ALRE+Y EKSSAG+D YSAKALARVWKAVRFSWWMTSMLHKFPD G A Sbjct: 301 AASDAHYLSSALREFYDEKSSAGIDAYSAKALARVWKAVRFSWWMTSMLHKFPDTGAIGA 360 Query: 361 RIQIAELDYLVSSKAASTSLSENYVGLPF 389 RIQ+AELDY+ S+AA +SLSENYVGLPF Sbjct: 361 RIQLAELDYVTQSQAAMSSLSENYVGLPF 389 >ref|NP_947126.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris CGA009] emb|CAE27222.1| 4-hydroxybenzoate hydroxylase (4-hydroxybenzoate-3-monooxygenase) [Rhodopseudomonas palustris CGA009] Length = 390 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 295/390 (75%), Positives = 335/390 (85%), Gaps = 1/390 (0%) Query: 1 LRTKVAIIGAGPAGLLLGQLLHTFGVDNIILERQTPDYVLGRIRAGLLEEGTVSLLESVG 60 +RT+VAIIGAGP+GLLLGQLLH +G+D +I+ER+ PDYVL RIRAG+LE+G V LL+ G Sbjct: 1 MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAG 60 Query: 61 AAARLHQEGLVHHGLELAFGGARHRIDLHGSTG-KTVTIYGQTEVTLDLMNARKAAGLTS 119 +ARLHQE LVH G E+AF G RH IDL G+TG K+VT+YGQTEVT DLM AR AAGLT+ Sbjct: 61 VSARLHQEALVHGGFEIAFAGQRHPIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTT 120 Query: 120 IYSAADVKPLDSDTEHPRVSYVKDGVTREIACDFIAGCDGFHGISRASVPASAITSYERV 179 IY AADV D + HP+V YVKDG TREI CDFIAGCDGFHGISR SVPASA+ S+ERV Sbjct: 121 IYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHGISRQSVPASAVQSFERV 180 Query: 180 YPFGWLGILSETPPVSPELIYNNHERGFALCTMRSSHRSRYYVQCPLDDHVDQWSDERFW 239 YPFGWLG+LS+TPPVSPELIY NH+RGFALC+MRS HRSRYYVQCPL D V WSD+RFW Sbjct: 181 YPFGWLGLLSDTPPVSPELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW 240 Query: 240 DELKRRLDQKAADEIVTGPSIEKSIAPLRSFVAEPMRFGRMFLAGDASHIVPPTGAKGLN 299 DELK RLD + A ++VTGPSIEKSIAPLRSFVAEPMRFGR+FLAGDA+HIVPPTGAKGLN Sbjct: 241 DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN 300 Query: 300 LAASDVHYLSQALREYYHEKSSAGLDGYSAKALARVWKAVRFSWWMTSMLHKFPDEGEFA 359 LAASDV+YLS+A+REYY EKS AG+D YSA AL RVWKA RFSWWMTS LH+FPD F+ Sbjct: 301 LAASDVYYLSRAMREYYAEKSEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFS 360 Query: 360 ARIQIAELDYLVSSKAASTSLSENYVGLPF 389 RIQ AELDYLV+SKAA TSL+ENYVGLP+ Sbjct: 361 QRIQTAELDYLVNSKAAITSLAENYVGLPY 390 >ref|YP_004110049.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris DX-1] gb|ADU45316.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris DX-1] Length = 390 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 291/390 (74%), Positives = 335/390 (85%), Gaps = 1/390 (0%) Query: 1 LRTKVAIIGAGPAGLLLGQLLHTFGVDNIILERQTPDYVLGRIRAGLLEEGTVSLLESVG 60 +RT+VAIIGAGP+GLLLGQLLH +G+D +ILER+ PDYVL RIRAG+LE+G V LL+ G Sbjct: 1 MRTQVAIIGAGPSGLLLGQLLHKYGIDAVILERKDPDYVLSRIRAGVLEQGMVDLLDEAG 60 Query: 61 AAARLHQEGLVHHGLELAFGGARHRIDLHGSTG-KTVTIYGQTEVTLDLMNARKAAGLTS 119 +ARLH+E LVH G E+AF G RH IDL G+TG K VT+YGQTEVT DLM AR AAGLT+ Sbjct: 61 VSARLHREALVHDGFEIAFAGKRHHIDLRGATGGKNVTVYGQTEVTRDLMEARNAAGLTT 120 Query: 120 IYSAADVKPLDSDTEHPRVSYVKDGVTREIACDFIAGCDGFHGISRASVPASAITSYERV 179 IY AADV D + HP+V +VKDG TREI+CDFIAGCDGFHGISR SVPASA+ S+ERV Sbjct: 121 IYDAADVSLHDFEGAHPKVRFVKDGTTREISCDFIAGCDGFHGISRQSVPASAVQSFERV 180 Query: 180 YPFGWLGILSETPPVSPELIYNNHERGFALCTMRSSHRSRYYVQCPLDDHVDQWSDERFW 239 YPFGWLG+LS+TPPVSPELIY NH+RGFALC+MRS+HRSRYYVQCPL D + WSD+RFW Sbjct: 181 YPFGWLGLLSDTPPVSPELIYVNHDRGFALCSMRSAHRSRYYVQCPLTDDIADWSDDRFW 240 Query: 240 DELKRRLDQKAADEIVTGPSIEKSIAPLRSFVAEPMRFGRMFLAGDASHIVPPTGAKGLN 299 DEL+ RLD A ++VTGPSIEKSIAPLRSFVAEPMRFGR+FLAGDA+HIVPPTGAKGLN Sbjct: 241 DELRSRLDPATAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN 300 Query: 300 LAASDVHYLSQALREYYHEKSSAGLDGYSAKALARVWKAVRFSWWMTSMLHKFPDEGEFA 359 LAASDV+YLS+A+REYY EKS AG+D YSA AL RVWKA RFSWWMTS LH+FPD F+ Sbjct: 301 LAASDVYYLSRAMREYYAEKSEAGIDAYSANALRRVWKAERFSWWMTSQLHRFPDHDAFS 360 Query: 360 ARIQIAELDYLVSSKAASTSLSENYVGLPF 389 RIQ AELDYL+SS+AA TSL+ENYVGLP+ Sbjct: 361 QRIQTAELDYLISSQAALTSLAENYVGLPY 390 >ref|YP_001990981.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris TIE-1] gb|ACF00506.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris TIE-1] Length = 390 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 292/390 (74%), Positives = 332/390 (85%), Gaps = 1/390 (0%) Query: 1 LRTKVAIIGAGPAGLLLGQLLHTFGVDNIILERQTPDYVLGRIRAGLLEEGTVSLLESVG 60 +RT+VAIIGAGP+GLLLGQLLH +G+D +I+ER+ PDYVL RIRAG+LE+G V LL+ G Sbjct: 1 MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAG 60 Query: 61 AAARLHQEGLVHHGLELAFGGARHRIDLHGSTG-KTVTIYGQTEVTLDLMNARKAAGLTS 119 + RLHQE LVH G E+AF G RH IDL G+TG K+VT+YGQTEVT DLM AR AAGLT+ Sbjct: 61 VSTRLHQEALVHGGFEIAFAGQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTT 120 Query: 120 IYSAADVKPLDSDTEHPRVSYVKDGVTREIACDFIAGCDGFHGISRASVPASAITSYERV 179 IY AADV D + HP+V YVKDG TREI CDFIAGCDGFHGISR SVPASA+ S+ERV Sbjct: 121 IYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHGISRQSVPASAVQSFERV 180 Query: 180 YPFGWLGILSETPPVSPELIYNNHERGFALCTMRSSHRSRYYVQCPLDDHVDQWSDERFW 239 YPFGWLG+LS+TPPVS ELIY NH+RGFALC+MRS HRSRYYVQCPL D V WSD+RFW Sbjct: 181 YPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW 240 Query: 240 DELKRRLDQKAADEIVTGPSIEKSIAPLRSFVAEPMRFGRMFLAGDASHIVPPTGAKGLN 299 DELK RLD + A ++VTGPSIEKSIAPLRSFVAEPMRFGR+FLAGDA+HIVPPTGAKGLN Sbjct: 241 DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN 300 Query: 300 LAASDVHYLSQALREYYHEKSSAGLDGYSAKALARVWKAVRFSWWMTSMLHKFPDEGEFA 359 LAASDV+YLS+ +REYY EKS AG+D YSA AL RVWKA RFSWWMTS LH+FPD F+ Sbjct: 301 LAASDVYYLSRVMREYYAEKSEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFS 360 Query: 360 ARIQIAELDYLVSSKAASTSLSENYVGLPF 389 RIQ AELDYLV+SKAA TSL+ENYVGLP+ Sbjct: 361 QRIQTAELDYLVNSKAALTSLAENYVGLPY 390 >ref|YP_782717.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris BisA53] gb|ABJ07737.1| 4-hydroxybenzoate 3-monooxygenase [Rhodopseudomonas palustris BisA53] Length = 389 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 286/389 (73%), Positives = 333/389 (85%) Query: 1 LRTKVAIIGAGPAGLLLGQLLHTFGVDNIILERQTPDYVLGRIRAGLLEEGTVSLLESVG 60 +RT+VAIIGAGPAGLLLGQLLH +G+DN+ILER+ PDYVL RIRAG+LE+G V L++ G Sbjct: 1 MRTQVAIIGAGPAGLLLGQLLHRYGIDNVILERKDPDYVLSRIRAGVLEQGAVDLIDEAG 60 Query: 61 AAARLHQEGLVHHGLELAFGGARHRIDLHGSTGKTVTIYGQTEVTLDLMNARKAAGLTSI 120 ARLH+EGLVH G+ELAF G RHRID +TG +VT+YGQTE+T D+M+AR A GL S+ Sbjct: 61 VGARLHREGLVHDGIELAFAGQRHRIDFKATTGVSVTVYGQTEITRDMMDARTAEGLVSV 120 Query: 121 YSAADVKPLDSDTEHPRVSYVKDGVTREIACDFIAGCDGFHGISRASVPASAITSYERVY 180 Y A DV D D EHP+V YVKDGV E+ACDFIAGCDGFHG++R S P A+T +ERVY Sbjct: 121 YEAEDVSLHDFDGEHPKVRYVKDGVAHELACDFIAGCDGFHGVARQSPPVGAVTHFERVY 180 Query: 181 PFGWLGILSETPPVSPELIYNNHERGFALCTMRSSHRSRYYVQCPLDDHVDQWSDERFWD 240 PFGW+G+LS+TPPVSPELIY+NHERGFALC+MRS HRSRYYVQC L + V+QW DERFWD Sbjct: 181 PFGWMGLLSDTPPVSPELIYSNHERGFALCSMRSPHRSRYYVQCSLAEDVEQWPDERFWD 240 Query: 241 ELKRRLDQKAADEIVTGPSIEKSIAPLRSFVAEPMRFGRMFLAGDASHIVPPTGAKGLNL 300 EL+RRLD A ++VTGPSIEKSIAPLRSFVAEPMRFGR+FLAGDA+HIVPPTGAKGLNL Sbjct: 241 ELRRRLDPDTAAKVVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNL 300 Query: 301 AASDVHYLSQALREYYHEKSSAGLDGYSAKALARVWKAVRFSWWMTSMLHKFPDEGEFAA 360 AASDV YLS+ALRE+Y EKSSAGLD YS KALAR+WKA RFSWWMT+MLH+FPD F Sbjct: 301 AASDVCYLSRALREFYAEKSSAGLDDYSRKALARIWKAERFSWWMTTMLHRFPDSTGFDG 360 Query: 361 RIQIAELDYLVSSKAASTSLSENYVGLPF 389 +IQ AELDYLV S+AA+TSL+ENYVGLP+ Sbjct: 361 KIQAAELDYLVGSQAATTSLAENYVGLPY 389