BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0032.p (232 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774491.1| hypothetical protein blr7851 [Bradyrhizobium ja... 407 e-112 ref|YP_001203103.1| hypothetical protein BRADO0950 [Bradyrhizobi... 400 e-110 ref|YP_001242893.1| hypothetical protein BBta_7104 [Bradyrhizobi... 397 e-109 ref|ZP_08628343.1| transcriptional regulator, DeoR family [Brady... 333 2e-89 ref|YP_001685176.1| helix-turn-helix type 11 domain-containing p... 308 4e-82 >ref|NP_774491.1| hypothetical protein blr7851 [Bradyrhizobium japonicum USDA 110] dbj|BAC53116.1| blr7851 [Bradyrhizobium japonicum USDA 110] Length = 232 Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust. Identities = 202/232 (87%), Positives = 213/232 (91%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIA+LI QRVPIRGEAGMGYI Sbjct: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIATLIGQRVPIRGEAGMGYI 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 LEKGFDLPPLMLTPDEIEA VLGAQWV GHAD LARAAEDLMAKIA+TVP+RLRPFVLE Sbjct: 61 LEKGFDLPPLMLTPDEIEAAVLGAQWVAGHADSTLARAAEDLMAKIADTVPERLRPFVLE 120 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 PASRAR +WNREPDR+DM RTR+QIHEGKKI L YRDE GR SER IWPI+VGY EAVRL Sbjct: 121 PASRARPSWNREPDRLDMARTRTQIHEGKKIMLRYRDEQGRPSERMIWPISVGYLEAVRL 180 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRRSLVWEAPRDT 232 LAAWCELR DFRSFRTDRVV A Y DEKYPERRD+LRA+WR+SLVW P+DT Sbjct: 181 LAAWCELRSDFRSFRTDRVVEATYLDEKYPERRDVLRAKWRQSLVWGPPKDT 232 >ref|YP_001203103.1| hypothetical protein BRADO0950 [Bradyrhizobium sp. ORS 278] emb|CAL74866.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 232 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/232 (85%), Positives = 212/232 (91%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MRRADRLFQIIQVLRRTR+PLTADAIAAELETSKRTIYRDIA+LI QRVPIRGEAGMGYI Sbjct: 1 MRRADRLFQIIQVLRRTRRPLTADAIAAELETSKRTIYRDIATLIGQRVPIRGEAGMGYI 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 LEKGFDLPPLMLTPDEIEA VLGAQWV +ADP LARAAEDLMAKIA+TVP+RLRPFVLE Sbjct: 61 LEKGFDLPPLMLTPDEIEAAVLGAQWVSVNADPVLARAAEDLMAKIADTVPERLRPFVLE 120 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 PASRA W REPDRIDM RTRSQIHEG+KI L YRDE GRDSER IWPIA+GYH+AVR+ Sbjct: 121 PASRAPRPWTREPDRIDMSRTRSQIHEGRKIKLRYRDEQGRDSERVIWPIAIGYHDAVRI 180 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRRSLVWEAPRDT 232 LAAWCELRRDFRSFRTDRVV A Y D+KYPERR+ LRA+WRRSLVWE P+D Sbjct: 181 LAAWCELRRDFRSFRTDRVVEATYLDDKYPERREALRAKWRRSLVWEVPKDV 232 >ref|YP_001242893.1| hypothetical protein BBta_7104 [Bradyrhizobium sp. BTAi1] gb|ABQ38987.1| hypothetical protein BBta_7104 [Bradyrhizobium sp. BTAi1] Length = 232 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/232 (85%), Positives = 212/232 (91%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MRRADRLFQIIQVLRRTR+PLTADAIAAELETSKRTIYRDIA+LI QRVPIRGEAGMGYI Sbjct: 1 MRRADRLFQIIQVLRRTRRPLTADAIAAELETSKRTIYRDIATLIGQRVPIRGEAGMGYI 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 LEKGFDLPPLMLTPDEIEA VLGAQWV +ADP LARAAEDLMAKIA+TVP+RLRPFVLE Sbjct: 61 LEKGFDLPPLMLTPDEIEAAVLGAQWVAVNADPVLARAAEDLMAKIADTVPERLRPFVLE 120 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 PASRA W+REPDRIDM RTRSQIHEG+KI L YRDE GRDSER IWPIA+GYH+AVR+ Sbjct: 121 PASRAPRPWSREPDRIDMSRTRSQIHEGRKIRLRYRDEQGRDSERVIWPIAIGYHDAVRI 180 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRRSLVWEAPRDT 232 LAAWCELR DFRSFRTDRVV A Y D+KYPERR+ LRA+WRRSLVWE P+D Sbjct: 181 LAAWCELRHDFRSFRTDRVVEADYLDDKYPERREALRAKWRRSLVWEVPKDV 232 >ref|ZP_08628343.1| transcriptional regulator, DeoR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09252.1| transcriptional regulator, DeoR family [Bradyrhizobiaceae bacterium SG-6C] Length = 239 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 160/224 (71%), Positives = 186/224 (83%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MRRADRLFQIIQVLRRTRKPLTA+AIA ELETSKRT+YRDIA+LI QRVPIRGEAG GY+ Sbjct: 1 MRRADRLFQIIQVLRRTRKPLTAEAIAGELETSKRTVYRDIATLIGQRVPIRGEAGTGYV 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 LEKGFD+PPLMLTPDE+EA VLGAQWV G ADP LA+AA+DL+AKI +T+P+RL+P LE Sbjct: 61 LEKGFDMPPLMLTPDEVEAAVLGAQWVAGRADPVLAKAAQDLIAKIVDTIPERLQPLALE 120 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 PASR R W+ PD DM R+ I+ KKI L+YRDE GRD+ERTIWPIA+GY E V Sbjct: 121 PASRIRPRWDAAPDTTDMTTLRAHIYASKKIRLHYRDEQGRDTERTIWPIAIGYLETVLH 180 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRRSL 224 LA WCELR+DFRSFR DR+V A++ DEKYPERR LR +W + + Sbjct: 181 LAGWCELRQDFRSFRIDRIVQALFLDEKYPERRAALRVKWLKVM 224 >ref|YP_001685176.1| helix-turn-helix type 11 domain-containing protein [Caulobacter sp. K31] gb|ABZ72678.1| Helix-turn-helix type 11 domain protein [Caulobacter sp. K31] Length = 238 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 147/224 (65%), Positives = 180/224 (80%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MRRA+RLFQIIQ+LRR R+P+TADA+AAELETSKR++YRDIA+LI QR PIRGEAG+GY+ Sbjct: 1 MRRAERLFQIIQILRRNRQPVTADAMAAELETSKRSVYRDIAALIGQRAPIRGEAGVGYV 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 LE G+D+PPLMLTPDEIEA VLGAQWV G DP LA AA DL+AKIA VP+ LRP+VL Sbjct: 61 LEAGYDMPPLMLTPDEIEAAVLGAQWVAGRGDPVLANAARDLIAKIAAAVPEELRPYVLT 120 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 PA+ A + W PD ID+ +TR+ IH G+KI L+YRDE G S+R IWP+ VGY E VRL Sbjct: 121 PATGAGTNWKALPDGIDIAQTRAWIHAGRKIRLDYRDEKGAVSQRVIWPVTVGYLETVRL 180 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRRSL 224 L WCELR DFR+FRTDR+ A + DE++ +R +LR RW+R+L Sbjct: 181 LIGWCELRNDFRNFRTDRIEGAAFLDERHGQRPGVLRTRWQRAL 224