BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0258.0025.p         (68 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769241.1| hypothetical protein bsr2601 [Bradyrhizobium ja...    84   9e-15

>ref|NP_769241.1| hypothetical protein bsr2601 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47866.1| bsr2601 [Bradyrhizobium japonicum USDA 110]
          Length = 73

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 5/73 (6%)

Query: 1  VAHSNQGIVKDNKGQEQPADKQRAQAAHKTDPRK-----SNAREATRDPKLNDADKTPGS 55
          +AHS+ GIV+D + ++QP DKQRAQ AHKT   K     S +REATRDPKLND +KTPGS
Sbjct: 1  MAHSDHGIVRDQRAEDQPRDKQRAQTAHKTGSHKTGSKGSPSREATRDPKLNDNNKTPGS 60

Query: 56 GMTSDDRGDPPTG 68
          G+  DD GD PTG
Sbjct: 61 GVMPDDSGDAPTG 73