BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0258.0022.p         (70 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771407.1| hypothetical protein bsl4767 [Bradyrhizobium ja...    67   7e-10
ref|NP_773104.1| hypothetical protein bsl6464 [Bradyrhizobium ja...    52   2e-05
ref|YP_533469.1| hypothetical protein RPC_3615 [Rhodopseudomonas...    42   0.031

>ref|NP_771407.1| hypothetical protein bsl4767 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50032.1| bsl4767 [Bradyrhizobium japonicum USDA 110]
          Length = 73

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 1  MIEERFDSRTLFAMNVALDRVCADAPHGEEHDTRRRVARYIIKCAKSGRTTLSELTEAGR 60
          MI   FD+RT   M +ALDR+C + P GE+H  RR VA  I++CA +GRT + +L +AG 
Sbjct: 1  MISAHFDTRTRINMKLALDRICRNRPRGEDHGFRRSVAENIVRCALAGRTGIGQLVDAGE 60

Query: 61 QALAKATA 68
          +A+    A
Sbjct: 61 RAVVTTRA 68


>ref|NP_773104.1| hypothetical protein bsl6464 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51729.1| bsl6464 [Bradyrhizobium japonicum USDA 110]
          Length = 82

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%)

Query: 6  FDSRTLFAMNVALDRVCADAPHGEEHDTRRRVARYIIKCAKSGRTTLSELTEAGRQALAK 65
             RT   M+V L+  C   PHG +HD+R+ +A  +I+ A++G +TL EL    R+ALA+
Sbjct: 17 LSERTKANMDVVLEETCRQLPHGGDHDSRKFIAERLIEAAQAGHSTLGELGIVARRALAE 76

Query: 66 ATA 68
            A
Sbjct: 77 IIA 79


>ref|YP_533469.1| hypothetical protein RPC_3615 [Rhodopseudomonas palustris BisB18]
 gb|ABD89150.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 6  FDSRTLFAMNVALDRVCADAPHGEEHDTRRRVARYIIKCAKSGRTTLSELTEAGRQALAK 65
          FDS T   +   LD VCA+ P  E  + R  VA  +++CA +G  ++  L  AG+QAL +
Sbjct: 2  FDSATTNLLRAVLDDVCAEIPRSET-NVRTHVAAKLLECAGNGERSIEVLRTAGKQALGR 60