BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0018.p (370 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774496.1| hypothetical protein blr7856 [Bradyrhizobium ja... 613 e-173 ref|YP_001203097.1| hypothetical protein BRADO0944 [Bradyrhizobi... 486 e-135 ref|YP_571140.1| cyclic nucleotide-binding protein [Rhodopseudom... 239 5e-61 gb|EGE60482.1| potassium channel protein [Rhizobium etli CNPAF512] 232 8e-59 ref|YP_470672.1| potassium channel protein [Rhizobium etli CFN 4... 231 1e-58 >ref|NP_774496.1| hypothetical protein blr7856 [Bradyrhizobium japonicum USDA 110] dbj|BAC53121.1| blr7856 [Bradyrhizobium japonicum USDA 110] Length = 369 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/365 (83%), Positives = 333/365 (91%) Query: 6 VLPALTRFVSATAGRNMTTAAYVAVAAGVAMMTLLTVAPAHDAAPRWVDALLWACLAYFV 65 ++ AL +FV+ATAGRNMT AAYVAV G+ M LLTV PA++ APRWVDALLWACLAYFV Sbjct: 5 LISALAQFVAATAGRNMTKAAYVAVGVGLLSMVLLTVGPAYETAPRWVDALLWACLAYFV 64 Query: 66 FEWLVRLRHMGRQGKFWFYALSSAGVVDAIGALAVPVALLSGVEPKTAWLLGVLWVLKVV 125 FEW+VRLRHM R + Y SSAG+VDAIGALAVPVAL+ GVE +TAWLL VLWVLKVV Sbjct: 65 FEWVVRLRHMRRTERLALYMSSSAGIVDAIGALAVPVALVLGVELRTAWLLSVLWVLKVV 124 Query: 126 PGIPGLRQLRRVLVVESGPLLSVLVIFLMVVFLASVAEYFLERDVQPQTFGSVPAALWWA 185 PGIPGLRQLRRVLV+ESGPL+SVLVIFLMVVFLASVAEYFLERDVQPQTFGSVPAALWWA Sbjct: 125 PGIPGLRQLRRVLVLESGPLVSVLVIFLMVVFLASVAEYFLERDVQPQTFGSVPAALWWA 184 Query: 186 VVTLTTTGYGDVVPITPLGRVVAAMVMISGLGVFGLWTGILATGFAAETRRDNFLRTWET 245 VVTLTTTGYGDVVP+TPLGR+VAA+VMISGLGVFGLWTGILATGFAAETRRDNFL+TWE+ Sbjct: 185 VVTLTTTGYGDVVPVTPLGRMVAALVMISGLGVFGLWTGILATGFAAETRRDNFLKTWES 244 Query: 246 VSKVPFFAHLGPAAIADVTQMLRTMDLPPRTMIIRKDTNGDCMYFVAAGEVEVDLPGRKV 305 VSKVPFFA LGPAAIADVT MLRTM+LP RTMIIRK T GDCMYF+AAG VEVDLPG+KV Sbjct: 245 VSKVPFFAALGPAAIADVTHMLRTMELPARTMIIRKGTQGDCMYFIAAGAVEVDLPGKKV 304 Query: 306 KLGEGEFFGEMALLGNAKRGASVSTSKVTRLLVLDLVDFRLLMARHPDLAETIDAEAKRR 365 +LGEG FFGEMALLGN RGA+VST+KV+RLLVLDLVDFR+LMARHPDLAETIDAEAKRR Sbjct: 305 QLGEGAFFGEMALLGNNMRGANVSTTKVSRLLVLDLVDFRVLMARHPDLAETIDAEAKRR 364 Query: 366 ERENQ 370 EN+ Sbjct: 365 TLENR 369 >ref|YP_001203097.1| hypothetical protein BRADO0944 [Bradyrhizobium sp. ORS 278] emb|CAL74860.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 371 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 249/370 (67%), Positives = 301/370 (81%) Query: 1 MSKRLVLPALTRFVSATAGRNMTTAAYVAVAAGVAMMTLLTVAPAHDAAPRWVDALLWAC 60 M+K + PAL RFV+ATAGR+MT AAY A+ G M LLT+ + AA RW+ ALLW C Sbjct: 1 MAKSSLPPALARFVAATAGRDMTGAAYAAMLLGTTAMVLLTLDATYAAAQRWIYALLWGC 60 Query: 61 LAYFVFEWLVRLRHMGRQGKFWFYALSSAGVVDAIGALAVPVALLSGVEPKTAWLLGVLW 120 LA+FV EW VR++ R + Y S G+VD +AVP AL++GVEP++AWLL W Sbjct: 61 LAFFVAEWAVRVQAAARMHRVIAYLTSGRGLVDTACTVAVPTALIAGVEPRSAWLLAFTW 120 Query: 121 VLKVVPGIPGLRQLRRVLVVESGPLLSVLVIFLMVVFLASVAEYFLERDVQPQTFGSVPA 180 LKVVPG+PGLR+LRRV+VV++ PLL+VLV+FL+V+FL SVAEY LE D QP TFG++P+ Sbjct: 121 ALKVVPGVPGLRRLRRVMVVQARPLLAVLVLFLLVLFLGSVAEYALEHDDQPATFGNIPS 180 Query: 181 ALWWAVVTLTTTGYGDVVPITPLGRVVAAMVMISGLGVFGLWTGILATGFAAETRRDNFL 240 A+WWAVVTLTTTGYGDVVP+TPLGR+VA+MVMISGLGVFGLWTGILAT FA ETRRDNFL Sbjct: 181 AMWWAVVTLTTTGYGDVVPVTPLGRLVASMVMISGLGVFGLWTGILATSFADETRRDNFL 240 Query: 241 RTWETVSKVPFFAHLGPAAIADVTQMLRTMDLPPRTMIIRKDTNGDCMYFVAAGEVEVDL 300 +TWE V +VPFFA LGPA IADVTQMLRT+DLPPR +IRK GDCMYF+AAGEVEVDL Sbjct: 241 KTWELVGRVPFFASLGPATIADVTQMLRTIDLPPRATVIRKGEPGDCMYFIAAGEVEVDL 300 Query: 301 PGRKVKLGEGEFFGEMALLGNAKRGASVSTSKVTRLLVLDLVDFRLLMARHPDLAETIDA 360 P +K++LGEG FFGEMALLGN R A++ T+ +++LLVLDLVDFR+LMARHPDLA++IDA Sbjct: 301 PTKKIRLGEGAFFGEMALLGNNLRSANIVTTSLSKLLVLDLVDFRVLMARHPDLAQSIDA 360 Query: 361 EAKRRERENQ 370 EA RR EN+ Sbjct: 361 EAVRRTLENR 370 >ref|YP_571140.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE41239.1| cyclic nucleotide-binding [Rhodopseudomonas palustris BisB5] Length = 367 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 128/286 (44%), Positives = 177/286 (61%) Query: 84 YALSSAGVVDAIGALAVPVALLSGVEPKTAWLLGVLWVLKVVPGIPGLRQLRRVLVVESG 143 Y SS G+VD ALA+P+ L + A L ++W L+ + GL + RV++ Sbjct: 78 YLSSSKGMVDLACALALPLGWLLAPDVHDARLFALVWTLRYISHSTGLTLIWRVMIRSRV 137 Query: 144 PLLSVLVIFLMVVFLASVAEYFLERDVQPQTFGSVPAALWWAVVTLTTTGYGDVVPITPL 203 LLS+ +FL+V + + ER+ QPQ FGSV ALWWA+VTLTTTGYGDVVP T Sbjct: 138 ALLSIAGLFLVVTLTGATLAHVFEREAQPQMFGSVGRALWWAIVTLTTTGYGDVVPTTIW 197 Query: 204 GRVVAAMVMISGLGVFGLWTGILATGFAAETRRDNFLRTWETVSKVPFFAHLGPAAIADV 263 GR++A VM+ G+ +F L GI+AT FA E +R +FLRTWE V VPFF LG AA+AD+ Sbjct: 198 GRLLAGWVMVGGIVMFALQAGIIATAFAEELQRRHFLRTWELVISVPFFRDLGAAAVADI 257 Query: 264 TQMLRTMDLPPRTMIIRKDTNGDCMYFVAAGEVEVDLPGRKVKLGEGEFFGEMALLGNAK 323 ++L+ D+ T+++R+ GD MYF+ +GE V + + V LG G FFGEMALL N Sbjct: 258 VRLLQARDVNAGTVVVREGEPGDAMYFIVSGEATVRVAPKPVVLGPGSFFGEMALLFNTP 317 Query: 324 RGASVSTSKVTRLLVLDLVDFRLLMARHPDLAETIDAEAKRREREN 369 R A+V ++ + LLVLD+ DF L R P+ I+ E + R +N Sbjct: 318 RSATVVATQPSVLLVLDIADFHQLAGRRPEFVNLIETEGRLRRDQN 363 >gb|EGE60482.1| potassium channel protein [Rhizobium etli CNPAF512] Length = 356 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 126/275 (45%), Positives = 172/275 (62%), Gaps = 1/275 (0%) Query: 91 VVDAIGALAVPVALLSGVEPKTAWLLGVLWVLKVVPGIPGLRQLRRVLVVESGPLLSVLV 150 V+D + L VP A V + L +W+LK + R L +V+ ES LL V Sbjct: 75 VIDLLAVL-VPAAAFLFVGSRDRDLYCAIWLLKPLRDSTFFRLLAKVVANESRNLLGVTS 133 Query: 151 IFLMVVFLASVAEYFLERDVQPQTFGSVPAALWWAVVTLTTTGYGDVVPITPLGRVVAAM 210 +F +V+F A++A Y +ERDVQP FGS+P A+WWAVVTL+TTGYGD +P + GRV+A + Sbjct: 134 VFGIVLFGAALAGYIIERDVQPDKFGSIPQAMWWAVVTLSTTGYGDEIPQSLAGRVLAGL 193 Query: 211 VMISGLGVFGLWTGILATGFAAETRRDNFLRTWETVSKVPFFAHLGPAAIADVTQMLRTM 270 VM+SG+G+F LW GILATGF E RR +F+R W+ V+ VP F LG AA+ ++ + LR Sbjct: 194 VMMSGIGIFALWAGILATGFYEEVRRQDFVRNWQLVAAVPLFQKLGSAALIEIVRALRPR 253 Query: 271 DLPPRTMIIRKDTNGDCMYFVAAGEVEVDLPGRKVKLGEGEFFGEMALLGNAKRGASVST 330 +P ++I RK GD M+F+ G V V P V+LG G FFGEMAL+ R A+VS Sbjct: 254 IVPAGSVICRKGEVGDQMFFIVEGRVTVATPDHPVELGAGNFFGEMALISGDPRSATVSA 313 Query: 331 SKVTRLLVLDLVDFRLLMARHPDLAETIDAEAKRR 365 + LL L VDF++L + P++AETI A R Sbjct: 314 ATEVSLLSLYAVDFQMLSSSSPEIAETIRKTALER 348 >ref|YP_470672.1| potassium channel protein [Rhizobium etli CFN 42] sp|Q2K5E1.1|CNGK1_RHIEC RecName: Full=Cyclic nucleotide-gated potassium channel RHE_CH03180 gb|ABC91945.1| probable potassium channel protein [Rhizobium etli CFN 42] Length = 355 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 127/278 (45%), Positives = 173/278 (62%), Gaps = 1/278 (0%) Query: 88 SAGVVDAIGALAVPVALLSGVEPKTAWLLGVLWVLKVVPGIPGLRQLRRVLVVESGPLLS 147 +A V+D + L VP A V + L +W+LK + R L +V+ ES LL Sbjct: 72 TALVIDLLAVL-VPAAAFLFVGSRDRDLYCAIWLLKPLRDSTFFRLLAKVVANESRNLLG 130 Query: 148 VLVIFLMVVFLASVAEYFLERDVQPQTFGSVPAALWWAVVTLTTTGYGDVVPITPLGRVV 207 V +F +V+F A++A Y +ERDVQP FGS+P A+WWAVVTL+TTGYGD +P + GRV+ Sbjct: 131 VTSVFGIVLFGAALAGYIIERDVQPDKFGSIPQAMWWAVVTLSTTGYGDEIPQSLAGRVL 190 Query: 208 AAMVMISGLGVFGLWTGILATGFAAETRRDNFLRTWETVSKVPFFAHLGPAAIADVTQML 267 A +VM+SG+G+F LW GILATGF E RR +F+R W+ V+ VP F LG AA+ ++ + L Sbjct: 191 AGLVMMSGIGIFALWAGILATGFYEEVRRQDFVRNWQLVAAVPLFQKLGSAALIEIVRAL 250 Query: 268 RTMDLPPRTMIIRKDTNGDCMYFVAAGEVEVDLPGRKVKLGEGEFFGEMALLGNAKRGAS 327 R +P +I RK GD M+F+ G V V P V+LG G FFGEMAL+ R A+ Sbjct: 251 RPRIVPAGAVICRKGEVGDQMFFIVEGRVTVATPDHPVELGAGNFFGEMALISGDPRSAT 310 Query: 328 VSTSKVTRLLVLDLVDFRLLMARHPDLAETIDAEAKRR 365 VS + LL L VDF++L + P++AETI A R Sbjct: 311 VSAATEVSLLSLYAVDFQILSSSSPEIAETIRKTALER 348