BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0010.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774440.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicu... 733 0.0 ref|YP_001242905.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 709 0.0 ref|YP_001203090.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 706 0.0 ref|YP_004110113.1| acyl-CoA dehydrogenase domain-containing pro... 705 0.0 ref|NP_947055.1| putative acyl-CoA dehydrogenase [Rhodopseudomon... 702 0.0 >ref|NP_774440.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC53065.1| bll7800 [Bradyrhizobium japonicum USDA 110] Length = 415 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/385 (90%), Positives = 367/385 (95%) Query: 1 MNFDDTPQEAAFRAEAKAWIAANAPKQYEDELRKASLGRVALKGANILEVAKAWQKKKAD 60 MNFDDTPQEA FRA A+AWI+ANAPKQYE+ELRK+SLGR LK ANILEVAKAWQKKKAD Sbjct: 1 MNFDDTPQEAEFRATARAWISANAPKQYEEELRKSSLGRTQLKNANILEVAKAWQKKKAD 60 Query: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGRLSSMFIIGHGMCGPTMMAFAGEEQKR 120 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFG+LS MFIIGHGMCGPTMMAFA EE KR Sbjct: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGKLSHMFIIGHGMCGPTMMAFAREEHKR 120 Query: 121 KYLPPLASGEKIWCQLFSEPSAGSDVAGLRTRAEKHGDEWVINGQKIWTSGAHYSDYGIL 180 YLPPLASGEK+WCQLFSEP+ GSDVAGLRTRAEK GDEWVINGQKIWTSGAHYSDYGIL Sbjct: 121 SYLPPLASGEKVWCQLFSEPAGGSDVAGLRTRAEKDGDEWVINGQKIWTSGAHYSDYGIL 180 Query: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFTDVRIPDAQRLGNVN 240 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFT+VRIPD QRLG VN Sbjct: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFTNVRIPDHQRLGEVN 240 Query: 241 DGWNVSLTTLMNERMSIGAGVATGFPELFDYCSSLMLEDGPAIENRAVRSKLANWAVKAS 300 DGWNVSLTTLMNERMSIGAGV+TGFPELFDYCS LML++GPAIE+RAVRSKLANWAVKAS Sbjct: 241 DGWNVSLTTLMNERMSIGAGVSTGFPELFDYCSGLMLDNGPAIEDRAVRSKLANWAVKAS 300 Query: 301 GLKYTSYRAISALSKGERPGPENSIGKLVAGSMIQDVATYALDLQGAAGALNGIEDAEVA 360 GL+YTS RAISALSKGERPGPENSIGKLVAGSMIQDVA YALDLQGA+G ++G EDAE+A Sbjct: 301 GLRYTSMRAISALSKGERPGPENSIGKLVAGSMIQDVAAYALDLQGASGVISGPEDAELA 360 Query: 361 GKFQAMLLRAPGTRVEGGTDEIMRN 385 G+FQAMLLRAPGTRVEGGTDEIMRN Sbjct: 361 GRFQAMLLRAPGTRVEGGTDEIMRN 385 >ref|YP_001242905.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ38999.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 414 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/404 (85%), Positives = 369/404 (91%), Gaps = 9/404 (2%) Query: 1 MNFDDTPQEAAFRAEAKAWIAANAPKQYEDELRKASLGRVALKGANILEVAKAWQKKKAD 60 MNFDDTPQEAAFR++A+AWIAANAPK+YEDELR SLGRV LK A+ILEVAKAWQKKKAD Sbjct: 1 MNFDDTPQEAAFRSQARAWIAANAPKEYEDELRATSLGRVGLKNADILEVAKAWQKKKAD 60 Query: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGRLSSMFIIGHGMCGPTMMAFAGEEQKR 120 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFG+LS +FIIGHGMCGPT+MA+A EE KR Sbjct: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGKLSGLFIIGHGMCGPTVMAYASEEHKR 120 Query: 121 KYLPPLASGEKIWCQLFSEPSAGSDVAGLRTRAEKHGDEWVINGQKIWTSGAHYSDYGIL 180 +YLPPLASGEK+WCQLFSEP+ GSDVAGLRTRAEK GD WVINGQKIWTSGAHYSDYGIL Sbjct: 121 QYLPPLASGEKVWCQLFSEPAGGSDVAGLRTRAEKRGDAWVINGQKIWTSGAHYSDYGIL 180 Query: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFTDVRIPDAQRLGNVN 240 LTRTDPTVPKHKGLTMFFLDMKS GVEVRPIKQASG SDFNEVYFTDV IPD+QRLG VN Sbjct: 181 LTRTDPTVPKHKGLTMFFLDMKSKGVEVRPIKQASGHSDFNEVYFTDVVIPDSQRLGAVN 240 Query: 241 DGWNVSLTTLMNERMSIGAGVATGFPELFDYCSSLMLEDGPAIENRAVRSKLANWAVKAS 300 DGWNV+LTTLMNERMSIGAGVATGFPELF +CS+LML+D PAIE+R VRSKLA+WAVKAS Sbjct: 241 DGWNVALTTLMNERMSIGAGVATGFPELFAFCSNLMLDDRPAIEDRNVRSKLASWAVKAS 300 Query: 301 GLKYTSYRAISALSKGERPGPENSIGKLVAGSMIQDVATYALDLQGAAGALNGIEDAEVA 360 GLKYTS RAISALSKGERPGPENSIGKLVAG MIQDVA YALDLQGAAG L+G E AE+A Sbjct: 301 GLKYTSMRAISALSKGERPGPENSIGKLVAGPMIQDVAAYALDLQGAAGVLSGSE-AELA 359 Query: 361 GKFQAMLLRAPGTRVEGGTDEIMRNXNS--------DTRIVKEV 396 GKFQAMLLRAPGTRVEGGTDEIMRN + D R+ K+V Sbjct: 360 GKFQAMLLRAPGTRVEGGTDEIMRNIIAERVLGLPGDIRVDKDV 403 >ref|YP_001203090.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL74853.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 414 Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/385 (90%), Positives = 368/385 (95%), Gaps = 1/385 (0%) Query: 1 MNFDDTPQEAAFRAEAKAWIAANAPKQYEDELRKASLGRVALKGANILEVAKAWQKKKAD 60 MNFDDTP EAAFRAEA+AWIAANAPKQYEDELR +SLGR ALK ANILEVAKAWQKKKAD Sbjct: 1 MNFDDTPHEAAFRAEARAWIAANAPKQYEDELRASSLGRTALKNANILEVAKAWQKKKAD 60 Query: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGRLSSMFIIGHGMCGPTMMAFAGEEQKR 120 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFG+LS+MFIIGHGMCGPT+MA+A EE KR Sbjct: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGKLSAMFIIGHGMCGPTVMAYASEEHKR 120 Query: 121 KYLPPLASGEKIWCQLFSEPSAGSDVAGLRTRAEKHGDEWVINGQKIWTSGAHYSDYGIL 180 +YLPPLASGEK+WCQLFSEP+ GSDVAGLRTRAEK GDEWVINGQKIWTSGAHYSDYGIL Sbjct: 121 QYLPPLASGEKVWCQLFSEPAGGSDVAGLRTRAEKRGDEWVINGQKIWTSGAHYSDYGIL 180 Query: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFTDVRIPDAQRLGNVN 240 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASG SDFNEVYFTDV IPD+QRLG VN Sbjct: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGHSDFNEVYFTDVVIPDSQRLGAVN 240 Query: 241 DGWNVSLTTLMNERMSIGAGVATGFPELFDYCSSLMLEDGPAIENRAVRSKLANWAVKAS 300 DGWNV+LTTLMNERMSIGAGVATGFPELFD+CS++ML+D PAIE+R VRSKLANWAVKAS Sbjct: 241 DGWNVALTTLMNERMSIGAGVATGFPELFDFCSNIMLDDRPAIEDRNVRSKLANWAVKAS 300 Query: 301 GLKYTSYRAISALSKGERPGPENSIGKLVAGSMIQDVATYALDLQGAAGALNGIEDAEVA 360 GLKYTS RAISALS+GERPGPENSIGKLVAGSM+QDVATYALDLQGAAG L+G E A+VA Sbjct: 301 GLKYTSMRAISALSRGERPGPENSIGKLVAGSMVQDVATYALDLQGAAGVLSGPE-ADVA 359 Query: 361 GKFQAMLLRAPGTRVEGGTDEIMRN 385 GKFQAMLLRAPGTRVEGGTDEIMRN Sbjct: 360 GKFQAMLLRAPGTRVEGGTDEIMRN 384 >ref|YP_004110113.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU45380.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 415 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/385 (86%), Positives = 362/385 (94%) Query: 1 MNFDDTPQEAAFRAEAKAWIAANAPKQYEDELRKASLGRVALKGANILEVAKAWQKKKAD 60 MNFDDTPQEA FRA+A+AWI ANAPKQYEDELRKASLGRV LKGANILEVAKAWQKKKAD Sbjct: 1 MNFDDTPQEAEFRAKARAWIDANAPKQYEDELRKASLGRVVLKGANILEVAKAWQKKKAD 60 Query: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGRLSSMFIIGHGMCGPTMMAFAGEEQKR 120 AGWA HWPKEYGGRGASPIERVIWQQEEG FG+L++MFIIG GMCGPTMMA+A EEQKR Sbjct: 61 AGWAVPHWPKEYGGRGASPIERVIWQQEEGVFGKLTAMFIIGQGMCGPTMMAYASEEQKR 120 Query: 121 KYLPPLASGEKIWCQLFSEPSAGSDVAGLRTRAEKHGDEWVINGQKIWTSGAHYSDYGIL 180 YLPPL SGEK+WCQLFSEP+ GSDVAGLRTRAEK GD+W+INGQKIWTSGAHYSDYGIL Sbjct: 121 HYLPPLGSGEKVWCQLFSEPAGGSDVAGLRTRAEKDGDDWIINGQKIWTSGAHYSDYGIL 180 Query: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFTDVRIPDAQRLGNVN 240 +TRTDPTVPKHKGLTMFFLD+KSPGVEVRPIKQA+G SDFNEVYF++VRIPD+QRLG V Sbjct: 181 ITRTDPTVPKHKGLTMFFLDIKSPGVEVRPIKQANGNSDFNEVYFSNVRIPDSQRLGAVG 240 Query: 241 DGWNVSLTTLMNERMSIGAGVATGFPELFDYCSSLMLEDGPAIENRAVRSKLANWAVKAS 300 DGWNVSLTTLMNERMSIGA VATGFPELFDYCSSL L+ PA+++RAVRSKLANWAVKAS Sbjct: 241 DGWNVSLTTLMNERMSIGANVATGFPELFDYCSSLTLDGAPALDDRAVRSKLANWAVKAS 300 Query: 301 GLKYTSYRAISALSKGERPGPENSIGKLVAGSMIQDVATYALDLQGAAGALNGIEDAEVA 360 GL+YTS+R+ISALSKG+RPGPENSIGKLVAGSMIQ+VA YALDLQGAAG L+G EDAEVA Sbjct: 301 GLRYTSFRSISALSKGQRPGPENSIGKLVAGSMIQEVAMYALDLQGAAGVLSGPEDAEVA 360 Query: 361 GKFQAMLLRAPGTRVEGGTDEIMRN 385 GKFQAMLLR+P TRVEGGTDEI+RN Sbjct: 361 GKFQAMLLRSPATRVEGGTDEILRN 385 >ref|NP_947055.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] ref|YP_001990907.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris TIE-1] emb|CAE27150.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gb|ACF00432.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 415 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/385 (86%), Positives = 361/385 (93%) Query: 1 MNFDDTPQEAAFRAEAKAWIAANAPKQYEDELRKASLGRVALKGANILEVAKAWQKKKAD 60 MNFDDTPQEA FRA+A+AWI ANAPKQYE+ELRKASLGRV LKGANILEVAKAWQKKKAD Sbjct: 1 MNFDDTPQEAEFRAKARAWIDANAPKQYEEELRKASLGRVVLKGANILEVAKAWQKKKAD 60 Query: 61 AGWACLHWPKEYGGRGASPIERVIWQQEEGPFGRLSSMFIIGHGMCGPTMMAFAGEEQKR 120 AGWA HWPKEYGGRGASPIERVIWQQEEG FG+L++MFIIG GMCGPTMMA+A EEQKR Sbjct: 61 AGWAVPHWPKEYGGRGASPIERVIWQQEEGVFGKLTAMFIIGQGMCGPTMMAYASEEQKR 120 Query: 121 KYLPPLASGEKIWCQLFSEPSAGSDVAGLRTRAEKHGDEWVINGQKIWTSGAHYSDYGIL 180 YLPPL SGEKIWCQLFSEP+ GSDVAGLRTRAEK GD+W+INGQKIWTSGAHYSDYGIL Sbjct: 121 HYLPPLGSGEKIWCQLFSEPAGGSDVAGLRTRAEKDGDDWIINGQKIWTSGAHYSDYGIL 180 Query: 181 LTRTDPTVPKHKGLTMFFLDMKSPGVEVRPIKQASGASDFNEVYFTDVRIPDAQRLGNVN 240 +TRTDPTVPKHKGLTMFFLDMKS GVEVRPIKQA+G SDFNEVYFT+VRIPD+QRLG V Sbjct: 181 ITRTDPTVPKHKGLTMFFLDMKSEGVEVRPIKQANGNSDFNEVYFTNVRIPDSQRLGAVG 240 Query: 241 DGWNVSLTTLMNERMSIGAGVATGFPELFDYCSSLMLEDGPAIENRAVRSKLANWAVKAS 300 DGWNVSLTTLMNERMSIGA VATGFPELFDYCSSL L+ PA+++RAVRSKLANWAVKAS Sbjct: 241 DGWNVSLTTLMNERMSIGANVATGFPELFDYCSSLTLDGAPALDDRAVRSKLANWAVKAS 300 Query: 301 GLKYTSYRAISALSKGERPGPENSIGKLVAGSMIQDVATYALDLQGAAGALNGIEDAEVA 360 GL+YTS+R+ISALSKG+RPGPENSIGKLVAGSMIQ+VA YALDLQGAAG L+G EDAEVA Sbjct: 301 GLRYTSFRSISALSKGQRPGPENSIGKLVAGSMIQEVAMYALDLQGAAGVLSGPEDAEVA 360 Query: 361 GKFQAMLLRAPGTRVEGGTDEIMRN 385 G+FQAMLLR+P TRVEGGTDEI+RN Sbjct: 361 GRFQAMLLRSPATRVEGGTDEILRN 385