BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0005.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242909.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizob... 447 e-124 ref|YP_001203086.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizob... 442 e-122 ref|NP_774444.1| 3-hydroxyacyl-CoA dehydrogenase type II [Bradyr... 426 e-117 ref|YP_532069.1| short-chain dehydrogenase/reductase SDR [Rhodop... 369 e-100 ref|YP_570733.1| short-chain dehydrogenase/reductase SDR [Rhodop... 365 4e-99 >ref|YP_001242909.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ39003.1| 3-hydroxyacyl-CoA dehydrogenase (short-chain) [Bradyrhizobium sp. BTAi1] Length = 252 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 234/252 (92%), Positives = 242/252 (96%) Query: 1 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQNKENAEKVAAEVKGVALHADVTD 60 MQL +VAVLITGGGSGLGAATARAMAAKGAK+ V+DQ+ ENAEKVAAE+KGVALHADVT+ Sbjct: 1 MQLNNVAVLITGGGSGLGAATARAMAAKGAKVAVLDQSLENAEKVAAEIKGVALHADVTN 60 Query: 61 EDAIKAAIAKAEAAHGIARVLMNCAGIGGSQRIVGKDGVYPLAKFVRIINVNLIGTFNVL 120 ED +KA IAKAEAAHGIARVL+NCAGIGGSQRIVGKDGVYPLAKF RIINVNLIGTFNVL Sbjct: 61 EDQVKAGIAKAEAAHGIARVLVNCAGIGGSQRIVGKDGVYPLAKFARIINVNLIGTFNVL 120 Query: 121 RLFAERLATEAPIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASLK 180 RLFAERL T PIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLAS K Sbjct: 121 RLFAERLVTAEPIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASQK 180 Query: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET Sbjct: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 Query: 241 IRLDGAIRMAPR 252 IRLDGAIRMAPR Sbjct: 241 IRLDGAIRMAPR 252 >ref|YP_001203086.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL74849.1| 3-hydroxyacyl-CoA dehydrogenase (short-chain) [Bradyrhizobium sp. ORS 278] Length = 252 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 231/252 (91%), Positives = 240/252 (95%) Query: 1 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQNKENAEKVAAEVKGVALHADVTD 60 MQL +VAVLITGGGSGLGAATARAMAAKGAK+ V+DQ+ ENAEKVAAE+KGVALHADVT+ Sbjct: 1 MQLNNVAVLITGGGSGLGAATARAMAAKGAKVAVLDQSLENAEKVAAEIKGVALHADVTN 60 Query: 61 EDAIKAAIAKAEAAHGIARVLMNCAGIGGSQRIVGKDGVYPLAKFVRIINVNLIGTFNVL 120 ED +KA IAKAEAAHGIARVL+NCAGIGGSQRIVGKDGVYPLAKF RIINVNLIGTFNVL Sbjct: 61 EDQVKAGIAKAEAAHGIARVLVNCAGIGGSQRIVGKDGVYPLAKFARIINVNLIGTFNVL 120 Query: 121 RLFAERLATEAPIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASLK 180 RLFAERL T +GEERGV INTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLAS K Sbjct: 121 RLFAERLVTAEAVGEERGVIINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASQK 180 Query: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET Sbjct: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 Query: 241 IRLDGAIRMAPR 252 IRLDGAIRMAPR Sbjct: 241 IRLDGAIRMAPR 252 >ref|NP_774444.1| 3-hydroxyacyl-CoA dehydrogenase type II [Bradyrhizobium japonicum USDA 110] dbj|BAC53069.1| 3-hydroxyacyl-CoA dehydrogenase type II [Bradyrhizobium japonicum USDA 110] Length = 252 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/252 (93%), Positives = 241/252 (95%) Query: 1 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQNKENAEKVAAEVKGVALHADVTD 60 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQ+KENAEKVAAEVKGVALHADVT Sbjct: 1 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQSKENAEKVAAEVKGVALHADVTS 60 Query: 61 EDAIKAAIAKAEAAHGIARVLMNCAGIGGSQRIVGKDGVYPLAKFVRIINVNLIGTFNVL 120 E+ IKAAIAKAEAAHGIARVLMNCAGIGGSQRIVG+DGVYPL KF RIINVNLIGTFN L Sbjct: 61 EEQIKAAIAKAEAAHGIARVLMNCAGIGGSQRIVGRDGVYPLEKFARIINVNLIGTFNCL 120 Query: 121 RLFAERLATEAPIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASLK 180 RLFAERL T PIGEERGV +NTASVAAYEGQIGQIAY+ASKGGVVGLTLPAARDLAS K Sbjct: 121 RLFAERLVTAEPIGEERGVIVNTASVAAYEGQIGQIAYAASKGGVVGLTLPAARDLASQK 180 Query: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDA+EYG LAVHIVENPMLNGET Sbjct: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDANEYGMLAVHIVENPMLNGET 240 Query: 241 IRLDGAIRMAPR 252 IRLDGAIRMAPR Sbjct: 241 IRLDGAIRMAPR 252 >ref|YP_532069.1| short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris BisB18] gb|ABD87750.1| short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris BisB18] Length = 252 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 192/252 (76%), Positives = 218/252 (86%) Query: 1 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQNKENAEKVAAEVKGVALHADVTD 60 MQLKDV+VLITGGGSGLGAATARAMAAKGAK+ V+D NK+NAEKVAAE+ G A DV++ Sbjct: 1 MQLKDVSVLITGGGSGLGAATARAMAAKGAKVAVLDMNKDNAEKVAAEIGGTACVGDVSE 60 Query: 61 EDAIKAAIAKAEAAHGIARVLMNCAGIGGSQRIVGKDGVYPLAKFVRIINVNLIGTFNVL 120 E ++ AIAKAEAAHG+ RVL+NCAGIG + + VGK+G PL +F R+I VNLIG+FN + Sbjct: 61 EAQVQEAIAKAEAAHGVIRVLVNCAGIGNAAKTVGKNGALPLDQFSRVIKVNLIGSFNCI 120 Query: 121 RLFAERLATEAPIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASLK 180 RL AER+ + PIGEERGV I+TASVAA++GQIGQ AYSASKGG+VG+TLP ARDLASL Sbjct: 121 RLVAERMQSAPPIGEERGVVISTASVAAFDGQIGQAAYSASKGGIVGMTLPVARDLASLN 180 Query: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 IRV TIAPGLFLTPLL GL EEA+KSLGAQVPHPARLGD SEY LAVHIVENPMLNGET Sbjct: 181 IRVMTIAPGLFLTPLLQGLPEEAQKSLGAQVPHPARLGDPSEYAMLAVHIVENPMLNGET 240 Query: 241 IRLDGAIRMAPR 252 IRLDGAIRMAPR Sbjct: 241 IRLDGAIRMAPR 252 >ref|YP_570733.1| short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris BisB5] gb|ABE40832.1| short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris BisB5] Length = 252 Score = 365 bits (937), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 199/252 (78%), Positives = 220/252 (87%) Query: 1 MQLKDVAVLITGGGSGLGAATARAMAAKGAKIGVIDQNKENAEKVAAEVKGVALHADVTD 60 MQLKDV+VLITGGGSGLGAATA+AMAAKGAK+ V+D NK+NAEKVAAE+ GVA DV+ Sbjct: 1 MQLKDVSVLITGGGSGLGAATAQAMAAKGAKVAVLDMNKDNAEKVAAEIGGVACVGDVSQ 60 Query: 61 EDAIKAAIAKAEAAHGIARVLMNCAGIGGSQRIVGKDGVYPLAKFVRIINVNLIGTFNVL 120 E +K AIAKAEAAHGI RVL+NCAGIGG+ + VGK G YPL F RIINVNLIG+FN + Sbjct: 61 EAPVKEAIAKAEAAHGIVRVLVNCAGIGGAVKTVGKQGAYPLDHFSRIINVNLIGSFNCI 120 Query: 121 RLFAERLATEAPIGEERGVAINTASVAAYEGQIGQIAYSASKGGVVGLTLPAARDLASLK 180 RL AER+ + IGEERGV INTASVAA++GQIGQ AYSASKGG+VG+TLP ARDLASL Sbjct: 121 RLVAERMQSAPTIGEERGVCINTASVAAFDGQIGQAAYSASKGGIVGMTLPVARDLASLN 180 Query: 181 IRVNTIAPGLFLTPLLMGLNEEARKSLGAQVPHPARLGDASEYGNLAVHIVENPMLNGET 240 IRV TIAPGLFLTPLLMGL+EEARKSLGAQVPHPARLGD SEY +LAV IVENPMLNGET Sbjct: 181 IRVMTIAPGLFLTPLLMGLSEEARKSLGAQVPHPARLGDPSEYASLAVQIVENPMLNGET 240 Query: 241 IRLDGAIRMAPR 252 IRLDGAIRMAPR Sbjct: 241 IRLDGAIRMAPR 252