BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0257.0023.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773158.1| hypothetical protein blr6518 [Bradyrhizobium ja... 249 1e-64 ref|NP_948837.1| hypothetical protein RPA3499 [Rhodopseudomonas ... 246 1e-63 ref|ZP_08630923.1| hypothetical protein CSIRO_4034 [Bradyrhizobi... 244 4e-63 ref|YP_781069.1| hypothetical protein RPE_2145 [Rhodopseudomonas... 242 2e-62 ref|YP_533131.1| hypothetical protein RPC_3270 [Rhodopseudomonas... 241 2e-62 >ref|NP_773158.1| hypothetical protein blr6518 [Bradyrhizobium japonicum USDA 110] dbj|BAC51783.1| blr6518 [Bradyrhizobium japonicum USDA 110] Length = 172 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 126/174 (72%), Positives = 140/174 (80%), Gaps = 3/174 (1%) Query: 1 MATDHIRYDVLARDALRGVLRRVLSDAAEHGLPGEHHFYITFLSHGDGVKLSPRLLAQYP 60 MATDHIRYDVLARDALRGVLR+VL+DAA HGLPGEHHF+ITF+S +GVKLS RLLAQYP Sbjct: 1 MATDHIRYDVLARDALRGVLRKVLTDAASHGLPGEHHFFITFVSKAEGVKLSSRLLAQYP 60 Query: 61 EEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLTVPFAAVTRFLDPSAPFDLRFDVSDA 120 EEMTIILQHQFWDL V EDRFEVGLSFGGIPERL VPF+A+ FLDPS F L+FD SD Sbjct: 61 EEMTIILQHQFWDLTVLEDRFEVGLSFGGIPERLVVPFSAIKSFLDPSVKFGLQFDTSDV 120 Query: 121 LSEEAPPATAPASPLPAPAAHAAVETESAETEQEPAKPSE-GAEVVRLDRFRKK 173 E P T PA+P P+ + T+ AET +EP PS+ GAEVVRLDRFRKK Sbjct: 121 --AEVAPETLPAAPAPSALSVPTPATDKAETAEEPTPPSQGGAEVVRLDRFRKK 172 >ref|NP_948837.1| hypothetical protein RPA3499 [Rhodopseudomonas palustris CGA009] emb|CAE28940.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 178 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 124/178 (69%), Positives = 140/178 (78%), Gaps = 5/178 (2%) Query: 1 MATDHIRYDVLARDALRGVLRRVLSDAAEHGLPGEHHFYITFLSHGDGVKLSPRLLAQYP 60 MATDHIRYDVLARDALRGVLR VL+D A+HGLPGEHHF+ITF S GDGVKLSPRLLAQYP Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHGLPGEHHFFITFQSKGDGVKLSPRLLAQYP 60 Query: 61 EEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLTVPFAAVTRFLDPSAPFDLRFDVSDA 120 EEMT++LQHQFWDLVVTEDRFEVGLSFGGIPERL VPFA++ F DPS F L+F+ +D Sbjct: 61 EEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAADE 120 Query: 121 LSE--EAPPATAPASPLPAPAA---HAAVETESAETEQEPAKPSEGAEVVRLDRFRKK 173 + E EA T + PAP A +A SA ++ EP + EGAEVVRLDRFRKK Sbjct: 121 VDETGEADDGTELVTAAPAPVALPTSSATTDSSAPSDDEPPRSGEGAEVVRLDRFRKK 178 >ref|ZP_08630923.1| hypothetical protein CSIRO_4034 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06455.1| hypothetical protein CSIRO_4034 [Bradyrhizobiaceae bacterium SG-6C] Length = 166 Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 123/173 (71%), Positives = 139/173 (80%), Gaps = 7/173 (4%) Query: 1 MATDHIRYDVLARDALRGVLRRVLSDAAEHGLPGEHHFYITFLSHGDGVKLSPRLLAQYP 60 MATDHIRYDVLARDALRGVL+ VL+DAAEHGLPGEHHFYITFLS +GVK+SPRLL+QYP Sbjct: 1 MATDHIRYDVLARDALRGVLKHVLADAAEHGLPGEHHFYITFLSKAEGVKISPRLLSQYP 60 Query: 61 EEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLTVPFAAVTRFLDPSAPFDLRFDVSDA 120 +EMT+ILQHQFWDLVVT+DRFEVGLSF GIPERL +PF+A+ F DPS F L+F+ DA Sbjct: 61 QEMTVILQHQFWDLVVTDDRFEVGLSFNGIPERLVIPFSAIKSFFDPSVQFGLQFEPVDA 120 Query: 121 LSEEAPPATAPASPLPAPAAHAAVETESAETEQEPAKPSEGAEVVRLDRFRKK 173 + E A P LP AA +SAETE+EP K EGAEVVRLDRFRKK Sbjct: 121 PAAE---ADTPVESLPVTAA----PEKSAETEEEPVKQGEGAEVVRLDRFRKK 166 >ref|YP_781069.1| hypothetical protein RPE_2145 [Rhodopseudomonas palustris BisA53] gb|ABJ06089.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris BisA53] Length = 169 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/173 (69%), Positives = 136/173 (78%), Gaps = 4/173 (2%) Query: 1 MATDHIRYDVLARDALRGVLRRVLSDAAEHGLPGEHHFYITFLSHGDGVKLSPRLLAQYP 60 MATDHIRYDVLARDALRGVLRRVL+DAAEHGLPGEHHF+ITFLS +GVK+SPRLLAQYP Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAAEHGLPGEHHFFITFLSRAEGVKMSPRLLAQYP 60 Query: 61 EEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLTVPFAAVTRFLDPSAPFDLRFDVSDA 120 EMT+ILQHQFWDLVVTEDRFEVGLSFGG+PERL VPF+A+ FLDPS F L+F+ Sbjct: 61 TEMTVILQHQFWDLVVTEDRFEVGLSFGGVPERLVVPFSAIKSFLDPSVEFGLQFEPDAP 120 Query: 121 LSEEAPPATAPASPLPAPAAHAAVETESAETEQEPAKPSEGAEVVRLDRFRKK 173 E+A A + P + + + E EP KPSEGAEVVRLDRFRKK Sbjct: 121 ADEQA----ANEAETPDGVGIGSAQAGTGEPTDEPTKPSEGAEVVRLDRFRKK 169 >ref|YP_533131.1| hypothetical protein RPC_3270 [Rhodopseudomonas palustris BisB18] gb|ABD88812.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris BisB18] Length = 172 Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/174 (72%), Positives = 140/174 (80%), Gaps = 3/174 (1%) Query: 1 MATDHIRYDVLARDALRGVLRRVLSDAAEHGLPGEHHFYITFLSHGDGVKLSPRLLAQYP 60 MATD IRYDVLARDALRGVLR+VL+DAAEHGLPGEHHF+ITFLS +GVKLSPRLL QYP Sbjct: 1 MATDLIRYDVLARDALRGVLRQVLTDAAEHGLPGEHHFFITFLSTAEGVKLSPRLLVQYP 60 Query: 61 EEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLTVPFAAVTRFLDPSAPFDLRFDVSDA 120 +EMT+ILQHQFWDLVVTEDRFEVGLSFGGIPERL VPFA++ F DPS F L+F+ S Sbjct: 61 QEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVEFGLQFEPS-- 118 Query: 121 LSEEAPPATAPASPLPA-PAAHAAVETESAETEQEPAKPSEGAEVVRLDRFRKK 173 L E P A PA+ +PA PA ++ET E KPSEGAEVVRLDRFRKK Sbjct: 119 LPGEVPAANQPAASVPASPAVPRDDAPAASETPAEQPKPSEGAEVVRLDRFRKK 172