BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0257.0020.p (166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773155.1| hypothetical protein bll6515 [Bradyrhizobium ja... 229 8e-59 ref|YP_781070.1| hypothetical protein RPE_2146 [Rhodopseudomonas... 213 1e-53 ref|YP_001207469.1| hypothetical protein BRADO5580 [Bradyrhizobi... 201 2e-50 ref|YP_001241935.1| hypothetical protein BBta_6102 [Bradyrhizobi... 199 1e-49 ref|YP_485651.1| tripartite tricarboxylate transporter TctA [Rho... 194 5e-48 >ref|NP_773155.1| hypothetical protein bll6515 [Bradyrhizobium japonicum USDA 110] dbj|BAC51780.1| bll6515 [Bradyrhizobium japonicum USDA 110] Length = 253 Score = 229 bits (585), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 115/149 (77%), Positives = 130/149 (87%) Query: 18 VRGPQDFVGGLAMMAVALFALWASSDLQGMHGFSFGAGTAPRMFAVLLLLLGGGVALMGV 77 +R QD+VGG+ +MA+ALFALWASSDLQGM GFSFGAGTAPRMF LL+ L G+AL G+ Sbjct: 105 IRSAQDYVGGVILMALALFALWASSDLQGMRGFSFGAGTAPRMFGGLLVALSAGIALTGL 164 Query: 78 LQAGPHIAAYSWRGPLFVSAAIVFFALAIRPLGLVVSAFAAFMIAAMGSQETKLVEAVIV 137 L GP +A YSWRGPLFV +IVFFALAIRPLGLVVSAFA+FMIAAMGS ET+ +EA +V Sbjct: 165 LTDGPAMAHYSWRGPLFVMVSIVFFALAIRPLGLVVSAFASFMIAAMGSHETRWLEAAVV 224 Query: 138 GACLTVGCALLFPYVLGLPMPMFPRFLIQ 166 GACLT+GCALLFPYVLGLPMPMFPRFLIQ Sbjct: 225 GACLTLGCALLFPYVLGLPMPMFPRFLIQ 253 >ref|YP_781070.1| hypothetical protein RPE_2146 [Rhodopseudomonas palustris BisA53] gb|ABJ06090.1| protein of unknown function DUF1468 [Rhodopseudomonas palustris BisA53] Length = 166 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 108/166 (65%), Positives = 134/166 (80%) Query: 1 MSDTPSEAPVKSILPKWVRGPQDFVGGLAMMAVALFALWASSDLQGMHGFSFGAGTAPRM 60 MSDTPS +S LP+W+RGPQDF+GGL +MAVA+FALWA+SDL+GM GFSFGAGTAPRM Sbjct: 1 MSDTPSGVSDRSALPRWIRGPQDFIGGLVLMAVAVFALWAASDLRGMQGFSFGAGTAPRM 60 Query: 61 FAVLLLLLGGGVALMGVLQAGPHIAAYSWRGPLFVSAAIVFFALAIRPLGLVVSAFAAFM 120 F LLL LG V +GV GP +A Y+WRGPLFVS AI+ FA+ IRPLGL ++AF +FM Sbjct: 61 FGALLLGLGAAVTAVGVFSEGPGLARYAWRGPLFVSLAILSFAVTIRPLGLPIAAFLSFM 120 Query: 121 IAAMGSQETKLVEAVIVGACLTVGCALLFPYVLGLPMPMFPRFLIQ 166 IAA+G+ ET+ ++ IVG CLT C+LLFPY LGLP+P++PRFL+Q Sbjct: 121 IAALGTPETRWLQTTIVGICLTAFCSLLFPYALGLPLPLWPRFLLQ 166 >ref|YP_001207469.1| hypothetical protein BRADO5580 [Bradyrhizobium sp. ORS 278] emb|CAL79252.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 259 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/148 (66%), Positives = 122/148 (82%) Query: 19 RGPQDFVGGLAMMAVALFALWASSDLQGMHGFSFGAGTAPRMFAVLLLLLGGGVALMGVL 78 R PQD+ GG+A+MA+ALFALWA+SDL GM GF+FG GTAPRM VLLL +G VA++G+ Sbjct: 112 RAPQDYFGGVALMAIALFALWAASDLSGMRGFTFGPGTAPRMLGVLLLGMGAAVAVIGLA 171 Query: 79 QAGPHIAAYSWRGPLFVSAAIVFFALAIRPLGLVVSAFAAFMIAAMGSQETKLVEAVIVG 138 GP + Y WRGPLFVS AI+ FA+AIRPLGL+V+A A+F+IAA+G+ ET+ E +IVG Sbjct: 172 TEGPALQVYHWRGPLFVSLAILSFAVAIRPLGLIVAALASFLIAALGTSETRWGETLIVG 231 Query: 139 ACLTVGCALLFPYVLGLPMPMFPRFLIQ 166 LT+GCALLFPYVLGLPMP+FPRFL+Q Sbjct: 232 VVLTLGCALLFPYVLGLPMPLFPRFLVQ 259 >ref|YP_001241935.1| hypothetical protein BBta_6102 [Bradyrhizobium sp. BTAi1] gb|ABQ38029.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 259 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/148 (64%), Positives = 121/148 (81%) Query: 19 RGPQDFVGGLAMMAVALFALWASSDLQGMHGFSFGAGTAPRMFAVLLLLLGGGVALMGVL 78 R PQD+ GG+ +MA+ALFALWA+SDL GM GF+FG GTAPRM VLLL +G VA++G++ Sbjct: 112 RAPQDYFGGVVLMAIALFALWAASDLSGMRGFTFGPGTAPRMLGVLLLGMGAAVAVIGLV 171 Query: 79 QAGPHIAAYSWRGPLFVSAAIVFFALAIRPLGLVVSAFAAFMIAAMGSQETKLVEAVIVG 138 GP + Y WRGPLFVS AI+ FA+AIRPLGL+V+A A+F+IAA+G+ ET+ E +IVG Sbjct: 172 TEGPSLQIYHWRGPLFVSLAILSFAVAIRPLGLIVAALASFLIAALGTSETRWGETLIVG 231 Query: 139 ACLTVGCALLFPYVLGLPMPMFPRFLIQ 166 LT+GCALLFPYVLGLPMP+FPR L+Q Sbjct: 232 VVLTLGCALLFPYVLGLPMPLFPRLLVQ 259 >ref|YP_485651.1| tripartite tricarboxylate transporter TctA [Rhodopseudomonas palustris HaA2] gb|ABD06740.1| TctB subunit of the tripartite tricarboxylate transport(TTT) family [Rhodopseudomonas palustris HaA2] Length = 166 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 107/166 (64%), Positives = 135/166 (81%) Query: 1 MSDTPSEAPVKSILPKWVRGPQDFVGGLAMMAVALFALWASSDLQGMHGFSFGAGTAPRM 60 MSDTPS KS+ PKW+RGPQDF+GGLA++AVA FALWASSDLQGM GFSFGAGTAPR+ Sbjct: 1 MSDTPSGISDKSLFPKWIRGPQDFIGGLALVAVAAFALWASSDLQGMQGFSFGAGTAPRI 60 Query: 61 FAVLLLLLGGGVALMGVLQAGPHIAAYSWRGPLFVSAAIVFFALAIRPLGLVVSAFAAFM 120 FA+LLL +G + + VL G +A + WRGPLFV AI+ FA++IRPLGL++SAFA+F+ Sbjct: 61 FALLLLGIGIVLTVTAVLVDGEPMAKFHWRGPLFVGLAILCFAVSIRPLGLIISAFASFL 120 Query: 121 IAAMGSQETKLVEAVIVGACLTVGCALLFPYVLGLPMPMFPRFLIQ 166 IAA+G+ ET+ E V+VG LT+GC+LLFPY LGLPMP++P LI+ Sbjct: 121 IAALGTPETRWKETVLVGIALTIGCSLLFPYALGLPMPLYPSVLIR 166