BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0257.0017.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_577969.1| thymidylate synthase [Nitrobacter hamburgensis ... 508 e-142 ref|ZP_08630915.1| thymidylate synthase [Bradyrhizobiaceae bacte... 506 e-141 ref|NP_773152.1| thymidylate synthase [Bradyrhizobium japonicum ... 505 e-141 ref|YP_318957.1| thymidylate synthase [Nitrobacter winogradskyi ... 502 e-140 ref|ZP_01045688.1| thymidylate synthase [Nitrobacter sp. Nb-311A... 501 e-140 >ref|YP_577969.1| thymidylate synthase [Nitrobacter hamburgensis X14] sp|Q1QJT8.1|TYSY_NITHX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gb|ABE63509.1| thymidylate synthase [Nitrobacter hamburgensis X14] Length = 264 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 237/264 (89%), Positives = 253/264 (95%) Query: 1 MNQYHDLLERILADGAEKHDRTGTGTLSIFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 MNQYHDLLERIL+DGAEKHDRTGTGTLSIFGHQMRFNLA+GFPMLTTK+LPLK+IVHELL Sbjct: 1 MNQYHDLLERILSDGAEKHDRTGTGTLSIFGHQMRFNLASGFPMLTTKKLPLKSIVHELL 60 Query: 61 WFLAGDTNIKYLNDNGVTIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIAGVVEMIK 120 WFL G+TN++YL ++GV+IWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIA VV+MI Sbjct: 61 WFLKGETNVRYLREHGVSIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIANVVDMIG 120 Query: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSGDVFLGVPFNIAS 180 R+PDSRRLIVSAWNPA+VDKMALPPCHCLFQFYVA+GKLSCQLYQRS DVFLGVPFNIAS Sbjct: 121 RSPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLEQARLQLTRPTRPLPTMAINPDVNDIF 240 YALLTMMVAQVTGLKPGDFVHSLGDAHLY NHL+QARLQLTRPTR LPTM INP+V IF Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYLNHLDQARLQLTRPTRSLPTMTINPEVKSIF 240 Query: 241 AFRYEDFKLEGYDPHPHIKAEVAV 264 AFRYEDFKLE YDPHPHIKAEVAV Sbjct: 241 AFRYEDFKLENYDPHPHIKAEVAV 264 >ref|ZP_08630915.1| thymidylate synthase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06447.1| thymidylate synthase [Bradyrhizobiaceae bacterium SG-6C] Length = 264 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 237/264 (89%), Positives = 250/264 (94%) Query: 1 MNQYHDLLERILADGAEKHDRTGTGTLSIFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 MNQYHDLLERILADGA+K DRTGTGTLSIFGHQMRFNLA+GFPMLTTK+L LK+IVHELL Sbjct: 1 MNQYHDLLERILADGAKKTDRTGTGTLSIFGHQMRFNLASGFPMLTTKKLHLKSIVHELL 60 Query: 61 WFLAGDTNIKYLNDNGVTIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIAGVVEMIK 120 WFLAGDTNIKYLNDNGV IWDEWAD NG+LGPVYGSQWRSWPAPDG +IDQI+ V+EMI+ Sbjct: 61 WFLAGDTNIKYLNDNGVRIWDEWADENGNLGPVYGSQWRSWPAPDGGTIDQISNVIEMIR 120 Query: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSGDVFLGVPFNIAS 180 +NPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRS DVFLGVPFNIAS Sbjct: 121 KNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLEQARLQLTRPTRPLPTMAINPDVNDIF 240 YALLTMMVAQVTGLKPGDFVHS GD HLY NHL+QARLQLTRPTRPLPTM INP+V DIF Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSFGDTHLYLNHLDQARLQLTRPTRPLPTMKINPNVKDIF 240 Query: 241 AFRYEDFKLEGYDPHPHIKAEVAV 264 +FRYEDF LE YDPHPHIKAEVAV Sbjct: 241 SFRYEDFTLENYDPHPHIKAEVAV 264 >ref|NP_773152.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110] sp|Q89G35.1|TYSY_BRAJA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase dbj|BAC51777.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 239/264 (90%), Positives = 248/264 (93%) Query: 1 MNQYHDLLERILADGAEKHDRTGTGTLSIFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 M+QY DLLERIL+DGAEK DRTGTGTLS+FGHQMRFNL+AGFPMLTTKRLPLKAIVHELL Sbjct: 1 MHQYQDLLERILSDGAEKTDRTGTGTLSVFGHQMRFNLSAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLAGDTNIKYLNDNGVTIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIAGVVEMIK 120 WFL GDTNIKYL DNGVTIWDEWADANGDLGPVYG QWRSWPAPDGRSIDQIA VV+MIK Sbjct: 61 WFLKGDTNIKYLRDNGVTIWDEWADANGDLGPVYGHQWRSWPAPDGRSIDQIANVVDMIK 120 Query: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSGDVFLGVPFNIAS 180 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRS DVFLGVPFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLEQARLQLTRPTRPLPTMAINPDVNDIF 240 YALLTMMVAQVTGLKPGDFVHS GD HLYSNHLEQA+LQLTR R LP M INPDV DIF Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSFGDTHLYSNHLEQAKLQLTRAPRALPVMRINPDVKDIF 240 Query: 241 AFRYEDFKLEGYDPHPHIKAEVAV 264 +FR+EDF+L GYDPHPHIKAEVAV Sbjct: 241 SFRFEDFELVGYDPHPHIKAEVAV 264 >ref|YP_318957.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255] sp|Q3SQ36.1|TYSY_NITWN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gb|ABA05605.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255] Length = 264 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 232/264 (87%), Positives = 251/264 (95%) Query: 1 MNQYHDLLERILADGAEKHDRTGTGTLSIFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 MNQYHDLLERIL +G EKHDRTGTGTLS+FGHQMRF+LA+GFPMLTTK+LP ++IVHELL Sbjct: 1 MNQYHDLLERILGEGTEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPFRSIVHELL 60 Query: 61 WFLAGDTNIKYLNDNGVTIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIAGVVEMIK 120 WFL G+TNIKYL DNGV+IWDEWADANGDLGPVYGSQWRSWPA DGR IDQIA V+++I+ Sbjct: 61 WFLRGETNIKYLKDNGVSIWDEWADANGDLGPVYGSQWRSWPARDGRGIDQIANVIDLIQ 120 Query: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSGDVFLGVPFNIAS 180 RNPDSRRLIVSAWNPA+VD+MALPPCHCLFQFYVA GKLSCQLYQRS DVFLGVPFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLEQARLQLTRPTRPLPTMAINPDVNDIF 240 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHL+QARLQL+RPTRPLPTM INP+V DIF Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLDQARLQLSRPTRPLPTMTINPEVKDIF 240 Query: 241 AFRYEDFKLEGYDPHPHIKAEVAV 264 AFRYEDF+LE YDPHPHIKAEVAV Sbjct: 241 AFRYEDFRLENYDPHPHIKAEVAV 264 >ref|ZP_01045688.1| thymidylate synthase [Nitrobacter sp. Nb-311A] gb|EAQ36456.1| thymidylate synthase [Nitrobacter sp. Nb-311A] Length = 264 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 234/264 (88%), Positives = 250/264 (94%) Query: 1 MNQYHDLLERILADGAEKHDRTGTGTLSIFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 MNQYHDLLERIL +GAEKHDRTGTGTLS+FGHQMRF+LA+GFPMLTTK+LPL++IVHELL Sbjct: 1 MNQYHDLLERILREGAEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPLRSIVHELL 60 Query: 61 WFLAGDTNIKYLNDNGVTIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIAGVVEMIK 120 WFL G+TNIKYL DNGV+IWDEWAD NGDLGPVYGSQWRSWPAPDG SIDQIA V++MI+ Sbjct: 61 WFLRGETNIKYLKDNGVSIWDEWADENGDLGPVYGSQWRSWPAPDGGSIDQIANVIDMIR 120 Query: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSGDVFLGVPFNIAS 180 RNPDSRRLIVSAWNPA+VDKMALPPCHCLFQFYVA+GKLSCQLYQRS DVFLGVPFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLEQARLQLTRPTRPLPTMAINPDVNDIF 240 YALLTMMVAQVTGL PGDFVHSLGDAHLYSNHLEQARLQL+RP RPLPTM INP+V DIF Sbjct: 181 YALLTMMVAQVTGLSPGDFVHSLGDAHLYSNHLEQARLQLSRPARPLPTMTINPEVKDIF 240 Query: 241 AFRYEDFKLEGYDPHPHIKAEVAV 264 AF Y DFKLE YDPHPHIKAEVAV Sbjct: 241 AFCYGDFKLENYDPHPHIKAEVAV 264