BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0257.0014.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773149.1| membrane bound protease protein [Bradyrhizobium... 631 e-179 ref|YP_781102.1| HflK protein [Rhodopseudomonas palustris BisA53... 631 e-179 ref|YP_001992976.1| HflK protein [Rhodopseudomonas palustris TIE... 622 e-176 ref|NP_948829.1| HflK protein [Rhodopseudomonas palustris CGA009... 619 e-175 ref|YP_533123.1| HflK protein [Rhodopseudomonas palustris BisB18... 613 e-173 >ref|NP_773149.1| membrane bound protease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51774.1| bll6509 [Bradyrhizobium japonicum USDA 110] Length = 380 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 317/382 (82%), Positives = 346/382 (90%), Gaps = 5/382 (1%) Query: 1 MPWKNQGGGPWGSGPKGPWGTGPQSAGPRPPDLEDLLRRGQDRLQQWLPGGHFSGMGVAL 60 MPWKNQGGGPWGSGPKGPWG+GPQ GPRPPDLEDLLRRGQDRLQQ +PGG+FSG+G+ L Sbjct: 1 MPWKNQGGGPWGSGPKGPWGSGPQPVGPRPPDLEDLLRRGQDRLQQIMPGGYFSGVGITL 60 Query: 61 VLVAALAIWFATGIFRVQSEELGVVLRFGKYVRDAQPGLRYHLPYPIETVLLPKALRVST 120 +++ +A W +G FRVQSEE GVVLRFGK+VR PGL YHLPYPIETVLLPKALRV+T Sbjct: 61 IILIIIAFWLLSGFFRVQSEERGVVLRFGKHVRTVDPGLNYHLPYPIETVLLPKALRVNT 120 Query: 121 ISIGMTLIDDPARRGRTMRDVPEESLMLTGDENIVDVDFTVLWRIKP--GGAGAYLFNIQ 178 ISIGMTLIDDPARRGR++RDVPEESLMLTGDENIVDVDFTVLWRIKP GG G +LFNIQ Sbjct: 121 ISIGMTLIDDPARRGRSIRDVPEESLMLTGDENIVDVDFTVLWRIKPDTGGVGDFLFNIQ 180 Query: 179 NPEGTVKAVAESAMREVIGRSQIQPILTGARNVTEQSVQELMQKTLDTYNAGIQITQVQM 238 NPEGTVKAVAESAMREVIGRSQIQPILTGARNVTEQ VQEL+QKTLD+Y AGIQI+QVQM Sbjct: 181 NPEGTVKAVAESAMREVIGRSQIQPILTGARNVTEQGVQELIQKTLDSYGAGIQISQVQM 240 Query: 239 QKVDPPAQVIDAFRDVQAARADLERKQNEAQTYANSIVPGARGRAAQIQQAAEGYKEQAV 298 QKVDPPAQVIDAFRDVQAARA+LE+ QNEAQTYAN +VP ARGRAAQI QAAEGYKEQAV Sbjct: 241 QKVDPPAQVIDAFRDVQAARANLEQLQNEAQTYANQVVPQARGRAAQIMQAAEGYKEQAV 300 Query: 299 AEAKGQSARFLKVYEEYKKAPDVTRERIYLETMEKVLGGSEKLVYDGGP-GQNIVPYLPL 357 AEAKGQS+RFLKVYEEYKKAP+VTRERIYLETME+VLGG++KLVYDGGP GQ +VPYLPL Sbjct: 301 AEAKGQSSRFLKVYEEYKKAPEVTRERIYLETMERVLGGADKLVYDGGPSGQGVVPYLPL 360 Query: 358 GELTPRRPAAPATTGQQQGATR 379 GELT +RP PA Q G +R Sbjct: 361 GELTTKRP--PAAGQQSSGGSR 380 >ref|YP_781102.1| HflK protein [Rhodopseudomonas palustris BisA53] gb|ABJ06122.1| HflK protein [Rhodopseudomonas palustris BisA53] Length = 382 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 307/377 (81%), Positives = 335/377 (88%), Gaps = 2/377 (0%) Query: 1 MPWKNQGGGPWGSGPKGPWGTGPQSAGPRPPDLEDLLRRGQDRLQQWLPGGHFSGMGVAL 60 MPWKNQGGGPWGSGPKGPWG+GPQ +GPRPPDLEDLLRRGQDRLQQ LPGGHFS MG+AL Sbjct: 1 MPWKNQGGGPWGSGPKGPWGSGPQPSGPRPPDLEDLLRRGQDRLQQLLPGGHFSAMGIAL 60 Query: 61 VLVAALAIWFATGIFRVQSEELGVVLRFGKYVRDAQPGLRYHLPYPIETVLLPKALRVST 120 +LV ALA+W +G FRVQSEELGVVLRFGK+VR QPGL YHLPYPIETVLLPKALRVST Sbjct: 61 ILVGALAVWGLSGFFRVQSEELGVVLRFGKHVRTVQPGLNYHLPYPIETVLLPKALRVST 120 Query: 121 ISIGMTLIDDPARRGRTMRDVPEESLMLTGDENIVDVDFTVLWRIKPGGAGAYLFNIQNP 180 I++GM+LI+DPARRG TMRDVPEESLMLTGDENIVDVDFTVLWRIKP G G YLFNIQNP Sbjct: 121 INVGMSLINDPARRGATMRDVPEESLMLTGDENIVDVDFTVLWRIKPDGVGNYLFNIQNP 180 Query: 181 EGTVKAVAESAMREVIGRSQIQPILTGARNVTEQSVQELMQKTLDTYNAGIQITQVQMQK 240 EGTVKAVAESAMREVIGRS IQPILTGAR TE VQ+LMQ+TLD Y AG+ + QVQ+QK Sbjct: 181 EGTVKAVAESAMREVIGRSNIQPILTGARTTTESGVQDLMQRTLDGYGAGVLVQQVQLQK 240 Query: 241 VDPPAQVIDAFRDVQAARADLERKQNEAQTYANSIVPGARGRAAQIQQAAEGYKEQAVAE 300 VDPPAQVIDAFRDVQAARADLER QNEAQTYAN ++P ARGR AQI Q A+GYKEQA+AE Sbjct: 241 VDPPAQVIDAFRDVQAARADLERLQNEAQTYANRVIPDARGRGAQILQVAQGYKEQAIAE 300 Query: 301 AKGQSARFLKVYEEYKKAPDVTRERIYLETMEKVLGGSEKLVYDGGPG--QNIVPYLPLG 358 AKGQS+RFL+VYEEY+KAP+VTRERIYLETME++ GGSEKL+ D G G Q +VPYLPL Sbjct: 301 AKGQSSRFLQVYEEYRKAPEVTRERIYLETMERIFGGSEKLIVDTGSGGSQGVVPYLPLN 360 Query: 359 ELTPRRPAAPATTGQQQ 375 ELT RRPAA A QQQ Sbjct: 361 ELTARRPAANAGQSQQQ 377 >ref|YP_001992976.1| HflK protein [Rhodopseudomonas palustris TIE-1] gb|ACF02501.1| HflK protein [Rhodopseudomonas palustris TIE-1] Length = 383 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 309/377 (81%), Positives = 334/377 (88%), Gaps = 3/377 (0%) Query: 1 MPWKNQGGGPWGSGPKGPWGTGPQSAGPRPPDLEDLLRRGQDRLQQWLPGGHFSGMGVAL 60 MPWKNQGGGPWGSGPKGPWG+GPQS+GPRPPDLEDLLRRGQDRLQQ LPGGHFSG+G+A+ Sbjct: 1 MPWKNQGGGPWGSGPKGPWGSGPQSSGPRPPDLEDLLRRGQDRLQQILPGGHFSGLGIAI 60 Query: 61 VLVAALAIWFATGIFRVQSEELGVVLRFGKYVRDAQPGLRYHLPYPIETVLLPKALRVST 120 VL+ ALAIW +G FRVQSEELGVVLRFGK+VR QPGL YHLPYPIETVLLPKALRV+T Sbjct: 61 VLLGALAIWGLSGFFRVQSEELGVVLRFGKHVRTVQPGLNYHLPYPIETVLLPKALRVNT 120 Query: 121 ISIGMTLIDDPARRGRTMRDVPEESLMLTGDENIVDVDFTVLWRIKPGGAGAYLFNIQNP 180 ISIGMTLI+DPARRG TM DVPEESLMLTGDENIVDVDFTVLWRIKP G G YLFNIQ+P Sbjct: 121 ISIGMTLINDPARRGATMHDVPEESLMLTGDENIVDVDFTVLWRIKPDGVGNYLFNIQSP 180 Query: 181 EGTVKAVAESAMREVIGRSQIQPILTGARNVTEQSVQELMQKTLDTYNAGIQITQVQMQK 240 +GTVKAVAESAMREVIGRS IQPILTGAR E +VQELMQKTLD+Y AG+ I QVQMQK Sbjct: 181 QGTVKAVAESAMREVIGRSDIQPILTGARTTIENAVQELMQKTLDSYGAGVLIQQVQMQK 240 Query: 241 VDPPAQVIDAFRDVQAARADLERKQNEAQTYANSIVPGARGRAAQIQQAAEGYKEQAVAE 300 VDPP QVIDAFRDVQAARADLER QNEAQTYAN ++P A+GRA+QI Q AEGYK QA+AE Sbjct: 241 VDPPQQVIDAFRDVQAARADLERLQNEAQTYANRVIPDAKGRASQIIQNAEGYKGQAIAE 300 Query: 301 AKGQSARFLKVYEEYKKAPDVTRERIYLETMEKVLGGSEKLVYD--GGPGQNIVPYLPLG 358 AKGQSARFL V+EEYKKAP VTRERIYLETME+VLG ++KLVYD G GQ IVPYLPL Sbjct: 301 AKGQSARFLDVFEEYKKAPAVTRERIYLETMERVLGSADKLVYDPGAGNGQGIVPYLPLN 360 Query: 359 ELTPRRPAAPATTGQQQ 375 ELT RR + PAT Q Q Sbjct: 361 ELT-RRSSPPATVQQNQ 376 >ref|NP_948829.1| HflK protein [Rhodopseudomonas palustris CGA009] emb|CAE28932.1| putative protease subunit hflK [Rhodopseudomonas palustris CGA009] Length = 383 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 308/377 (81%), Positives = 333/377 (88%), Gaps = 3/377 (0%) Query: 1 MPWKNQGGGPWGSGPKGPWGTGPQSAGPRPPDLEDLLRRGQDRLQQWLPGGHFSGMGVAL 60 MPWKNQGGGPWGSGPKGPWG+GPQ +GPRPPDLEDLLRRGQDRLQQ LPGGHFSG+G+A+ Sbjct: 1 MPWKNQGGGPWGSGPKGPWGSGPQLSGPRPPDLEDLLRRGQDRLQQILPGGHFSGLGIAI 60 Query: 61 VLVAALAIWFATGIFRVQSEELGVVLRFGKYVRDAQPGLRYHLPYPIETVLLPKALRVST 120 VL+ ALAIW +G FRVQSEELGVVLRFGK+VR QPGL YHLPYPIETVLLPKALRV+T Sbjct: 61 VLLGALAIWGLSGFFRVQSEELGVVLRFGKHVRTVQPGLNYHLPYPIETVLLPKALRVNT 120 Query: 121 ISIGMTLIDDPARRGRTMRDVPEESLMLTGDENIVDVDFTVLWRIKPGGAGAYLFNIQNP 180 ISIGMTLI+DPARRG TM DVPEESLMLTGDENIVDVDFTVLWRIKP G G YLFNIQ+P Sbjct: 121 ISIGMTLINDPARRGATMHDVPEESLMLTGDENIVDVDFTVLWRIKPDGVGNYLFNIQSP 180 Query: 181 EGTVKAVAESAMREVIGRSQIQPILTGARNVTEQSVQELMQKTLDTYNAGIQITQVQMQK 240 +GTVKAVAESAMREVIGRS IQPILTGAR E +VQELMQKTLD+Y AG+ I QVQMQK Sbjct: 181 QGTVKAVAESAMREVIGRSDIQPILTGARTTIENAVQELMQKTLDSYGAGVLIQQVQMQK 240 Query: 241 VDPPAQVIDAFRDVQAARADLERKQNEAQTYANSIVPGARGRAAQIQQAAEGYKEQAVAE 300 VDPP QVIDAFRDVQAARADLER QNEAQTYAN ++P A+GRA+QI Q AEGYK QA+AE Sbjct: 241 VDPPQQVIDAFRDVQAARADLERLQNEAQTYANRVIPDAKGRASQIIQNAEGYKGQAIAE 300 Query: 301 AKGQSARFLKVYEEYKKAPDVTRERIYLETMEKVLGGSEKLVYD--GGPGQNIVPYLPLG 358 AKGQSARFL V+EEYKKAP VTRERIYLETME+VLG ++KLVYD G GQ IVPYLPL Sbjct: 301 AKGQSARFLDVFEEYKKAPAVTRERIYLETMERVLGSADKLVYDPGAGNGQGIVPYLPLN 360 Query: 359 ELTPRRPAAPATTGQQQ 375 ELT RR + PAT Q Q Sbjct: 361 ELT-RRSSPPATVQQNQ 376 >ref|YP_533123.1| HflK protein [Rhodopseudomonas palustris BisB18] gb|ABD88804.1| HflK protein [Rhodopseudomonas palustris BisB18] Length = 383 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 314/383 (81%), Positives = 337/383 (87%), Gaps = 4/383 (1%) Query: 1 MPWKNQGGGPWGSGPKGPWGTGPQSAGPRPPDLEDLLRRGQDRLQQWLPGGHFSGMGVAL 60 MPWKNQGGGPWGSGPKGPWG+GPQS GPRPPDLEDLLRRGQDRLQQ LPGGH S MG+AL Sbjct: 1 MPWKNQGGGPWGSGPKGPWGSGPQSTGPRPPDLEDLLRRGQDRLQQMLPGGHLSSMGIAL 60 Query: 61 VLVAALAIWFATGIFRVQSEELGVVLRFGKYVRDAQPGLRYHLPYPIETVLLPKALRVST 120 VLVAALA+W +G FRVQSEELGVVLRFGK+VR QPGL YHLPYPIETVLLPKALRVST Sbjct: 61 VLVAALAVWGLSGFFRVQSEELGVVLRFGKHVRTVQPGLNYHLPYPIETVLLPKALRVST 120 Query: 121 ISIGMTLIDDPARRGRTMRDVPEESLMLTGDENIVDVDFTVLWRIKPGGAGAYLFNIQNP 180 ISIGMTL++D ARRG MRDVPEESLMLTGDENIVDVDFTVLWRI P G G YLFNIQNP Sbjct: 121 ISIGMTLVNDTARRGTAMRDVPEESLMLTGDENIVDVDFTVLWRISPDGVGNYLFNIQNP 180 Query: 181 EGTVKAVAESAMREVIGRSQIQPILTGARNVTEQSVQELMQKTLDTYNAGIQITQVQMQK 240 EGTVKAVAESAMREV+GR+ IQPILTGAR TE SVQ+LMQKTLD Y AGI + QVQMQK Sbjct: 181 EGTVKAVAESAMREVVGRASIQPILTGARTTTEASVQDLMQKTLDGYGAGILVQQVQMQK 240 Query: 241 VDPPAQVIDAFRDVQAARADLERKQNEAQTYANSIVPGARGRAAQIQQAAEGYKEQAVAE 300 VDPPAQVIDAFRDVQAARADLER QNEAQTYAN ++P ARGRA+QI Q AEGYKEQAVAE Sbjct: 241 VDPPAQVIDAFRDVQAARADLERLQNEAQTYANRVIPDARGRASQILQVAEGYKEQAVAE 300 Query: 301 AKGQSARFLKVYEEYKKAPDVTRERIYLETMEKVLGGSEKLVYDGGPG--QNIVPYLPLG 358 AKGQSARFLKVY+EY+KAPDVTR+RIYLETME++LGG++KLVYDGG Q IVPYLPL Sbjct: 301 AKGQSARFLKVYDEYRKAPDVTRQRIYLETMERILGGADKLVYDGGGAGSQGIVPYLPLS 360 Query: 359 ELTPRRP--AAPATTGQQQGATR 379 EL+ RRP A P QQ G+ R Sbjct: 361 ELSSRRPPAATPGQPQQQSGSIR 383