BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0257.0011.p (498 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_577964.1| peptidase S1C, Do [Nitrobacter hamburgensis X14... 767 0.0 ref|YP_001207461.1| putative Serine protease do-like [Bradyrhizo... 764 0.0 ref|YP_001241927.1| putative Serine protease do-like [Bradyrhizo... 760 0.0 ref|NP_773146.1| DO-like serine protease [Bradyrhizobium japonic... 760 0.0 ref|YP_318952.1| peptidase S1C, Do [Nitrobacter winogradskyi Nb-... 759 0.0 >ref|YP_577964.1| peptidase S1C, Do [Nitrobacter hamburgensis X14] gb|ABE63504.1| Peptidase S1C, Do [Nitrobacter hamburgensis X14] Length = 497 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/503 (81%), Positives = 457/503 (90%), Gaps = 11/503 (2%) Query: 1 MTAARPALSRRFRMMGAAISIGAASMLSSVPAFARGPEGIADIAEKVIDAVVNISTSQTV 60 MT A PALS R R + AA+ +GAAS L S PA ARGP+GIAD+AEKVIDAVVNIST+QTV Sbjct: 1 MTGAIPALSFRRRSLLAALCLGAASALISAPALARGPDGIADVAEKVIDAVVNISTTQTV 60 Query: 61 EAK-----DRTMPQLPPGSPFEEFFDDFFKNRRGPPGKGGDKSGEFQPRKTNSLGSGFIV 115 EAK R +PQLPPGSPFEEFFDDFFKNRRG K G QP KTNSLGSGFIV Sbjct: 61 EAKGGSEGHRVIPQLPPGSPFEEFFDDFFKNRRG------GKDGGLQPHKTNSLGSGFIV 114 Query: 116 DTAGIVVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKPPKPLTAVKFGD 175 D AGIVVTNNHVIAD+DEINVILNDG K+KAE+VGVDKKTDLAVLKFKPP PLTAVKFGD Sbjct: 115 DPAGIVVTNNHVIADSDEINVILNDGIKVKAEIVGVDKKTDLAVLKFKPPHPLTAVKFGD 174 Query: 176 SDKIRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISQGPYDSYIQTDAAINRGNSGGPLF 235 SDK+RLG+WVVAIGNPFSLGGTVTAGIVSA+NRDI+ GPYDSYIQTDAAINRGNSGGPLF Sbjct: 175 SDKLRLGEWVVAIGNPFSLGGTVTAGIVSARNRDINNGPYDSYIQTDAAINRGNSGGPLF 234 Query: 236 NLDGEVIGVNTLIISPTGGSIGLGFAVPSKTVAGVVDQLQKFGELRRGWLGVRIQQVTDE 295 NLDGEV+GVNTLIISP+GGSIG+GFAVPSKTVAGVVDQL++FGELRRGWLGVRIQQVTDE Sbjct: 235 NLDGEVVGVNTLIISPSGGSIGIGFAVPSKTVAGVVDQLRQFGELRRGWLGVRIQQVTDE 294 Query: 296 IADSLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSRIVADTAVGK 355 IADSLNIKPARGALVAGV+DKGPAKPAGIEPGDV++ FDGKD+K+PKDLSRIVADTAVGK Sbjct: 295 IADSLNIKPARGALVAGVEDKGPAKPAGIEPGDVIIAFDGKDIKEPKDLSRIVADTAVGK 354 Query: 356 EVDVVVIRKGNEETRKVTLGRLEDNEKVQQVNAKSKDDSAEKPVTQKALGLDLAALSKDL 415 V+V++IRKG +ET+KVTLGRL+D++K V+ K+K DS +KPVTQKALGLDLAALSKDL Sbjct: 355 TVNVMIIRKGKQETKKVTLGRLDDSDKATPVSVKTKPDSDDKPVTQKALGLDLAALSKDL 414 Query: 416 RTKYKIKDSVKGVVVTGVDGNSDAAEKRLSAGDVIVEVAQEAVSSAADIKKRVDQLKKDG 475 RT+YKIKDSVKGV++T VD +SDAAEKRLSAGDVIVEVAQEAVSSA+DI+KR+DQLKKDG Sbjct: 415 RTRYKIKDSVKGVIITDVDADSDAAEKRLSAGDVIVEVAQEAVSSASDIRKRIDQLKKDG 474 Query: 476 KKSVLLLVSNGDGELRFVALGVQ 498 KK+VLL+VSNG GELRFVAL ++ Sbjct: 475 KKAVLLMVSNGTGELRFVALSLK 497 >ref|YP_001207461.1| putative Serine protease do-like [Bradyrhizobium sp. ORS 278] emb|CAL79244.1| Putative Serine protease do-like precursor [Bradyrhizobium sp. ORS 278] Length = 499 Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/504 (83%), Positives = 445/504 (88%), Gaps = 11/504 (2%) Query: 1 MTAARPALSRRFRMMGAAISIGAASMLSSVPAFARGPEGIADIAEKVIDAVVNISTSQTV 60 MTA A RR R + A + A L PA ARGPEGIAD+AEKVIDAVVNISTSQTV Sbjct: 1 MTATL-AFRRRLRPILTAAVLAAGWALVPAPASARGPEGIADVAEKVIDAVVNISTSQTV 59 Query: 61 EAKDRTM------PQLPPGSPFEEFFDDFFKNRRGPPGKGGDKSGEFQPRKTNSLGSGFI 114 EAK PQ+PPGSPFEEFFDDFFKNRRG GG + PR+TNSLGSGFI Sbjct: 60 EAKGGGGEGRGANPQVPPGSPFEEFFDDFFKNRRG---PGGRGGADNSPRRTNSLGSGFI 116 Query: 115 VDTAGIVVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKPPKPLTAVKFG 174 VD +GIVVTNNHVIADADEINVI+NDGTKIKAELVGVDKKTDLAVLKFKPP+ LT VKFG Sbjct: 117 VDDSGIVVTNNHVIADADEINVIMNDGTKIKAELVGVDKKTDLAVLKFKPPRQLTVVKFG 176 Query: 175 DSDKIRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISQGPYDSYIQTDAAINRGNSGGPL 234 DSDK+RLGDWVVAIGNPFSLGGTVTAGIVSAKNRDIS GPYDSYIQTDAAINRGNSGGPL Sbjct: 177 DSDKLRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISSGPYDSYIQTDAAINRGNSGGPL 236 Query: 235 FNLDGEVIGVNTLIISPTGGSIGLGFAVPSKTVAGVVDQLQKFGELRRGWLGVRIQQVTD 294 FNLDGEVIGVNTLIISP+GGSIG+GFAVPSKTVAGVVDQL++FGELRRGWLGVRIQ VTD Sbjct: 237 FNLDGEVIGVNTLIISPSGGSIGIGFAVPSKTVAGVVDQLRQFGELRRGWLGVRIQGVTD 296 Query: 295 EIADSLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSRIVADTAVG 354 EIA+SLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDG D+K+PKDLSRIVADTAVG Sbjct: 297 EIAESLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGHDIKEPKDLSRIVADTAVG 356 Query: 355 KEVDVVVIRKGNEETRKVTLGRLEDNEKVQQVNAKSKDDSAEKPVTQKALGLDLAALSKD 414 KEVDVVVIRKG E+T KV LGRLEDNEKVQQ K KD+ AEKPVTQKALGLDLAALSKD Sbjct: 357 KEVDVVVIRKGQEQTLKVKLGRLEDNEKVQQAAIK-KDEPAEKPVTQKALGLDLAALSKD 415 Query: 415 LRTKYKIKDSVKGVVVTGVDGNSDAAEKRLSAGDVIVEVAQEAVSSAADIKKRVDQLKKD 474 LRT+YKIKDSVKGVVVTGVD SDAAEKRLS GDVIVEVAQEAV+S ADIKKRVDQLKKD Sbjct: 416 LRTRYKIKDSVKGVVVTGVDQASDAAEKRLSPGDVIVEVAQEAVTSGADIKKRVDQLKKD 475 Query: 475 GKKSVLLLVSNGDGELRFVALGVQ 498 GKKSVLLLVSN DGELRFVAL +Q Sbjct: 476 GKKSVLLLVSNADGELRFVALSLQ 499 >ref|YP_001241927.1| putative Serine protease do-like [Bradyrhizobium sp. BTAi1] gb|ABQ38021.1| Putative Serine protease do-like precursor [Bradyrhizobium sp. BTAi1] Length = 498 Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/504 (84%), Positives = 453/504 (89%), Gaps = 12/504 (2%) Query: 1 MTAARPALSRRFRMMGAAI-SIGAASMLSSVPAFARGPEGIADIAEKVIDAVVNISTSQT 59 MTA ALSR ++ AA+ ++G A L+ PA ARGPEGIAD+AEKVIDAVVNISTSQT Sbjct: 1 MTATL-ALSRLRPIVTAAVFAVGWA--LAPAPASARGPEGIADVAEKVIDAVVNISTSQT 57 Query: 60 VEAK-----DRTMPQLPPGSPFEEFFDDFFKNRRGPPGKGGDKSGEFQPRKTNSLGSGFI 114 VEAK PQ+PPGSPFEEFFDDFFKNRRG G GG + PR+TNSLGSGFI Sbjct: 58 VEAKGGGEGRGANPQVPPGSPFEEFFDDFFKNRRG--GPGGRGGADNSPRRTNSLGSGFI 115 Query: 115 VDTAGIVVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKPPKPLTAVKFG 174 VD +G+VVTNNHVIADADEINVI+NDGTKIKAELVGVDKKTDLAVLKFKPP+PLT VKFG Sbjct: 116 VDDSGVVVTNNHVIADADEINVIMNDGTKIKAELVGVDKKTDLAVLKFKPPRPLTVVKFG 175 Query: 175 DSDKIRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISQGPYDSYIQTDAAINRGNSGGPL 234 DSDK+RLGDWVVAIGNPFSLGGTVTAGIVSAKNRDIS GPYDSYIQTDAAINRGNSGGPL Sbjct: 176 DSDKLRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISSGPYDSYIQTDAAINRGNSGGPL 235 Query: 235 FNLDGEVIGVNTLIISPTGGSIGLGFAVPSKTVAGVVDQLQKFGELRRGWLGVRIQQVTD 294 FNLDGEVIGVNTLIISP+GGSIG+GFAVPSKTVAGVVDQL++FGELRRGWLGVRIQ VTD Sbjct: 236 FNLDGEVIGVNTLIISPSGGSIGIGFAVPSKTVAGVVDQLRQFGELRRGWLGVRIQGVTD 295 Query: 295 EIADSLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSRIVADTAVG 354 EIA+SLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDG D+K+PKDLSRIVADTAVG Sbjct: 296 EIAESLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGHDIKEPKDLSRIVADTAVG 355 Query: 355 KEVDVVVIRKGNEETRKVTLGRLEDNEKVQQVNAKSKDDSAEKPVTQKALGLDLAALSKD 414 KEVDV+VIRKG E+T KV LGRLEDNEKVQQ K KD+ AEKP TQKALGLDLAALSKD Sbjct: 356 KEVDVIVIRKGQEQTLKVKLGRLEDNEKVQQAAIK-KDEPAEKPQTQKALGLDLAALSKD 414 Query: 415 LRTKYKIKDSVKGVVVTGVDGNSDAAEKRLSAGDVIVEVAQEAVSSAADIKKRVDQLKKD 474 LRT+YKIKDSVKGV+VTGVD SDAAEKRLSAGDVIVEVAQEAV+S ADIKKRVDQLKKD Sbjct: 415 LRTRYKIKDSVKGVIVTGVDQGSDAAEKRLSAGDVIVEVAQEAVTSGADIKKRVDQLKKD 474 Query: 475 GKKSVLLLVSNGDGELRFVALGVQ 498 GKKSVLLLVSN DGELRFVAL +Q Sbjct: 475 GKKSVLLLVSNADGELRFVALSLQ 498 >ref|NP_773146.1| DO-like serine protease [Bradyrhizobium japonicum USDA 110] dbj|BAC51771.1| serine protease DO-like precursor [Bradyrhizobium japonicum USDA 110] Length = 507 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/508 (83%), Positives = 451/508 (88%), Gaps = 11/508 (2%) Query: 1 MTAARPALSRRFRMMGAAISIGAASMLSS------VPAFARGPEGIADIAEKVIDAVVNI 54 MTAA A SR + IG A++ S PA ARGPEGIAD+AEKVIDAVVNI Sbjct: 1 MTAAIIAPSRLRHRARLGVRIGLAALAVSAFGAFGTPAQARGPEGIADVAEKVIDAVVNI 60 Query: 55 STSQTVEAK---DRTMPQLPPGSPFEEFFDDFFKNRRGPPGKGGDKSGEFQP-RKTNSLG 110 STSQTVEAK TMPQLPPGSPFEEFFDDFFKNRRGP G GG K G+ P RKTNSLG Sbjct: 61 STSQTVEAKGGGSNTMPQLPPGSPFEEFFDDFFKNRRGPGGPGGGKGGDNGPPRKTNSLG 120 Query: 111 SGFIVDTAGIVVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKPPKPLTA 170 SGFI+DT+G+VVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKP KPL A Sbjct: 121 SGFIIDTSGVVVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKPTKPLVA 180 Query: 171 VKFGDSDKIRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISQGPYDSYIQTDAAINRGNS 230 VKFGDSDK+RLGDWVVAIGNPFSLGGTVTAGIVSAKNRDIS GPYDSYIQTDAAINRGNS Sbjct: 181 VKFGDSDKLRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISSGPYDSYIQTDAAINRGNS 240 Query: 231 GGPLFNLDGEVIGVNTLIISPTGGSIGLGFAVPSKTVAGVVDQLQKFGELRRGWLGVRIQ 290 GGPLFNLDG+VIGVNTLIISP+GGSIG+GFAVPSKTV GVVDQL++FGELRRGWLGVRIQ Sbjct: 241 GGPLFNLDGDVIGVNTLIISPSGGSIGIGFAVPSKTVMGVVDQLRQFGELRRGWLGVRIQ 300 Query: 291 QVTDEIADSLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSRIVAD 350 VTDEIA+SLNIKP RGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSR+VAD Sbjct: 301 SVTDEIAESLNIKPPRGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSRVVAD 360 Query: 351 TAVGKEVDVVVIRKGNEETRKVTLGRLEDNEKVQQVNAKSKDDSAEKPVTQKALGLDLAA 410 TAVGKEVDV++IRKG EET+KVTLGRL+D +KVQ K+ + + EKPVTQKALGLDLA Sbjct: 361 TAVGKEVDVIIIRKGQEETKKVTLGRLQDPDKVQAA-VKTDEPAPEKPVTQKALGLDLAV 419 Query: 411 LSKDLRTKYKIKDSVKGVVVTGVDGNSDAAEKRLSAGDVIVEVAQEAVSSAADIKKRVDQ 470 L+KDLRT+YKIKDSVKGVVVT VD NSDAAEKRLSAGDVIVEVAQE VSS ADI+KRVDQ Sbjct: 420 LNKDLRTRYKIKDSVKGVVVTNVDANSDAAEKRLSAGDVIVEVAQEVVSSGADIQKRVDQ 479 Query: 471 LKKDGKKSVLLLVSNGDGELRFVALGVQ 498 LKKDGKKSVLLLVSN DGELRFVAL VQ Sbjct: 480 LKKDGKKSVLLLVSNADGELRFVALSVQ 507 >ref|YP_318952.1| peptidase S1C, Do [Nitrobacter winogradskyi Nb-255] gb|ABA05600.1| peptidase S1C, Do [Nitrobacter winogradskyi Nb-255] Length = 496 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/502 (79%), Positives = 447/502 (89%), Gaps = 10/502 (1%) Query: 1 MTAARPALSRRFRMMGAAISIGAASMLSSVPAFARGPEGIADIAEKVIDAVVNISTSQTV 60 MT A ALS R R + +A +G AS + S PA ARGP+GIAD+AEKVIDAVVNIST+Q V Sbjct: 1 MTRAMQALSLRRRFLLSAFCLGVASAVVSAPALARGPDGIADVAEKVIDAVVNISTTQKV 60 Query: 61 EAKD----RTMPQLPPGSPFEEFFDDFFKNRRGPPGKGGDKSGEFQPRKTNSLGSGFIVD 116 EAK R +PQLPPGSPFEEFFDDFFKNRRG KS Q KTNSLGSGFIVD Sbjct: 61 EAKSGEGRRMIPQLPPGSPFEEFFDDFFKNRRG------GKSDGLQTHKTNSLGSGFIVD 114 Query: 117 TAGIVVTNNHVIADADEINVILNDGTKIKAELVGVDKKTDLAVLKFKPPKPLTAVKFGDS 176 AGIVVTNNHVIAD+DEINVILNDGTK+KAE VGVDKKTDLAVLKFKPP PL AVKFGDS Sbjct: 115 AAGIVVTNNHVIADSDEINVILNDGTKVKAETVGVDKKTDLAVLKFKPPHPLMAVKFGDS 174 Query: 177 DKIRLGDWVVAIGNPFSLGGTVTAGIVSAKNRDISQGPYDSYIQTDAAINRGNSGGPLFN 236 DK+RLG+WV+AIGNPFSLGG+V+AGIVSA+NRDI+ GPYDSYIQTDAAINRGNSGGPLFN Sbjct: 175 DKLRLGEWVIAIGNPFSLGGSVSAGIVSARNRDINNGPYDSYIQTDAAINRGNSGGPLFN 234 Query: 237 LDGEVIGVNTLIISPTGGSIGLGFAVPSKTVAGVVDQLQKFGELRRGWLGVRIQQVTDEI 296 L+GEV+GVNTLIISP+GGSIG+GFAVPSKTVAGVVDQL+KFGELRRGWLGVRIQQVTDEI Sbjct: 235 LEGEVVGVNTLIISPSGGSIGIGFAVPSKTVAGVVDQLRKFGELRRGWLGVRIQQVTDEI 294 Query: 297 ADSLNIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDVKDPKDLSRIVADTAVGKE 356 ADSLNIKPARGALVAGV+DKGPAKPAGIEPGDVV+ FDGKD+K+PKDLSR+VADTAVGK Sbjct: 295 ADSLNIKPARGALVAGVEDKGPAKPAGIEPGDVVIAFDGKDIKEPKDLSRMVADTAVGKT 354 Query: 357 VDVVVIRKGNEETRKVTLGRLEDNEKVQQVNAKSKDDSAEKPVTQKALGLDLAALSKDLR 416 V VVVIRKG EET+KVTLGRL+D++K V+ K+K + +KPVTQKALGLDLA LSKDLR Sbjct: 355 VSVVVIRKGKEETKKVTLGRLDDSDKAIPVSIKTKPEDDDKPVTQKALGLDLATLSKDLR 414 Query: 417 TKYKIKDSVKGVVVTGVDGNSDAAEKRLSAGDVIVEVAQEAVSSAADIKKRVDQLKKDGK 476 +YKIKDSVKGV++T V+ +SDAAEKRLSAGDVIVEVAQEAV+SA+DI+KR+DQLKKDGK Sbjct: 415 ARYKIKDSVKGVIITEVEADSDAAEKRLSAGDVIVEVAQEAVNSASDIRKRIDQLKKDGK 474 Query: 477 KSVLLLVSNGDGELRFVALGVQ 498 K+VLL+VSNG GELRFVAL ++ Sbjct: 475 KAVLLMVSNGAGELRFVALSLK 496