BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0255.0025.p (536 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774007.1| acetyl-coenzyme A synthetase [Bradyrhizobium ja... 992 0.0 ref|ZP_08627262.1| acetyl-coenzyme A synthetase [Bradyrhizobiace... 912 0.0 ref|YP_001203472.1| Acetyl-coenzyme A synthetase [Bradyrhizobium... 869 0.0 ref|YP_571104.1| AMP-dependent synthetase and ligase [Rhodopseud... 861 0.0 ref|YP_001242585.1| Acetyl-coenzyme A synthetase [Bradyrhizobium... 858 0.0 >ref|NP_774007.1| acetyl-coenzyme A synthetase [Bradyrhizobium japonicum USDA 110] dbj|BAC52632.1| acetyl-coenzyme A synthetase [Bradyrhizobium japonicum USDA 110] Length = 562 Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/536 (87%), Positives = 504/536 (94%) Query: 1 MLQEAKTYDELYRNFRWDVPARFNMATACCDRHADGTGRLALVYVDEDGGTTRTSFDEVA 60 ML EAKTYDELYRNFRWD+PARFNMA ACCDRHADGTGRLAL+YVDE+G TTRTSFDEVA Sbjct: 27 MLTEAKTYDELYRNFRWDIPARFNMAEACCDRHADGTGRLALIYVDENGATTRTSFDEVA 86 Query: 61 DASRRFANVLTADGLVRGDRVAVFLSQSLELPVAHLAAFRAAMISIPLFALFGEDALEFR 120 + SRRFANVL ADGL RGDRVAVFLSQSLELP+AH+AAFR+ +ISIPLFALFGEDALEFR Sbjct: 87 EMSRRFANVLKADGLARGDRVAVFLSQSLELPIAHMAAFRSGLISIPLFALFGEDALEFR 146 Query: 121 LSNSAAKAVITDEAGWEKIAKIRDRLPELKSVYIVGEKTPAGTKPFWSAIKSASPEFATV 180 LSNS A+A+ITDEAGWEK+ ++RDRLP L+ +Y+ AG KPFW AI++AS +FATV Sbjct: 147 LSNSQARAIITDEAGWEKLTRVRDRLPYLQDIYVTSGAVHAGAKPFWPAIETASEDFATV 206 Query: 181 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI 240 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI Sbjct: 207 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI 266 Query: 241 GGLINGLFAFWYHGIPMVGHRARKFEPQAAMQMMAELGIRNVFLPPTALKLMRQANVKNS 300 GGL+NGL AFWYHGIP+VGHRARKFEPQAAMQMMA+L +RNVFLPPTALKLMRQA VK+ Sbjct: 267 GGLVNGLLAFWYHGIPLVGHRARKFEPQAAMQMMADLSVRNVFLPPTALKLMRQAGVKHP 326 Query: 301 GVRLRSIFTGGESLGGELLDWVRDTFGIDAHEVFGQTECNLVIGSNSNLFPIRPGSMGRA 360 GV+LRSIFTGGESLGGELL WVR+TFGIDAHEVFGQTECNLVIGSNSNLFPIRPG+MG+A Sbjct: 327 GVKLRSIFTGGESLGGELLGWVRETFGIDAHEVFGQTECNLVIGSNSNLFPIRPGAMGKA 386 Query: 361 TPGFDVRIVNEKGEELPRGQRGIIGVRQPCPCTMIEYWRNPEATAKKYAGEFLLTGDLGV 420 TPGFDVRIVN+KGEE PRGQRGIIGVRQPCP TM+EYWRNPEAT KKYAG+FLLTGDLGV Sbjct: 387 TPGFDVRIVNDKGEEQPRGQRGIIGVRQPCPVTMLEYWRNPEATRKKYAGDFLLTGDLGV 446 Query: 421 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHPAVAMSAVVGIPDPIRTESIKAWI 480 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHP+VAM+AVVGIPDPIRTESIKAWI Sbjct: 447 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHPSVAMAAVVGIPDPIRTESIKAWI 506 Query: 481 VLRPGYAPGDALAREIQEFVKVQLAAHEYPRFVQFADSLPMTATGKVLRRELRALG 536 VLRPG+ DALAREIQEFVKVQLAAHEYPRFV+FA++LPMTATGKVLRRELRA G Sbjct: 507 VLRPGFTGSDALAREIQEFVKVQLAAHEYPRFVEFAETLPMTATGKVLRRELRAKG 562 >ref|ZP_08627262.1| acetyl-coenzyme A synthetase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09888.1| acetyl-coenzyme A synthetase [Bradyrhizobiaceae bacterium SG-6C] Length = 549 Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/536 (78%), Positives = 482/536 (89%) Query: 1 MLQEAKTYDELYRNFRWDVPARFNMATACCDRHADGTGRLALVYVDEDGGTTRTSFDEVA 60 ML +A +YD+LY+NFRWD+PARFN+ATACCDR+ADG+GRLAL+YVDEDG T + SFDE++ Sbjct: 14 MLPQADSYDDLYKNFRWDIPARFNIATACCDRYADGSGRLALIYVDEDGATQKLSFDEIS 73 Query: 61 DASRRFANVLTADGLVRGDRVAVFLSQSLELPVAHLAAFRAAMISIPLFALFGEDALEFR 120 S+ FANVL ADGL RGDRVAVFLSQS+ELP+AHLAAFR+ MIS+PLF LFGEDALE+R Sbjct: 74 GLSKSFANVLKADGLRRGDRVAVFLSQSVELPIAHLAAFRSGMISVPLFTLFGEDALEYR 133 Query: 121 LSNSAAKAVITDEAGWEKIAKIRDRLPELKSVYIVGEKTPAGTKPFWSAIKSASPEFATV 180 LSNS AKAVITDE+GWEK++KIRDRLP L+ +YI AG K FW +I+ A +F TV Sbjct: 134 LSNSGAKAVITDESGWEKLSKIRDRLPHLQDIYITSGTIHAGAKSFWQSIEDAPEDFQTV 193 Query: 181 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI 240 DTS DDPA+IIYTSGTTGNPKGALHAHRV+LGHLPNVEM H+FLP+PGDLMWTPADWAWI Sbjct: 194 DTSPDDPAIIIYTSGTTGNPKGALHAHRVLLGHLPNVEMAHDFLPKPGDLMWTPADWAWI 253 Query: 241 GGLINGLFAFWYHGIPMVGHRARKFEPQAAMQMMAELGIRNVFLPPTALKLMRQANVKNS 300 GGL + LF WYHG+PM+G+RA+KFEPQAAMQ+MA+ G+RNVFLPPTALKLMRQANVK+ Sbjct: 254 GGLFDALFPAWYHGVPMLGYRAKKFEPQAAMQLMADHGVRNVFLPPTALKLMRQANVKHP 313 Query: 301 GVRLRSIFTGGESLGGELLDWVRDTFGIDAHEVFGQTECNLVIGSNSNLFPIRPGSMGRA 360 GVRLRSIF+GGESLG EL++WVR TFG+D HE++GQTECNLV+ +NSNLFPIRPGSMG+ Sbjct: 314 GVRLRSIFSGGESLGAELIEWVRTTFGVDVHEIYGQTECNLVLANNSNLFPIRPGSMGKP 373 Query: 361 TPGFDVRIVNEKGEELPRGQRGIIGVRQPCPCTMIEYWRNPEATAKKYAGEFLLTGDLGV 420 TPGFDVRIVNE+GEE PR RGI+GVR P P TMIEYW+NP+ATAKKYA FLLTGDLGV Sbjct: 374 TPGFDVRIVNEQGEEQPRNARGIVGVRVPNPVTMIEYWQNPDATAKKYANGFLLTGDLGV 433 Query: 421 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHPAVAMSAVVGIPDPIRTESIKAWI 480 QD+DGYFWYVSREDDVIT+AGYR+GP+EIEHTLMKHPAVAMSAVVGIPDPIRTE IKAWI Sbjct: 434 QDDDGYFWYVSREDDVITSAGYRIGPAEIEHTLMKHPAVAMSAVVGIPDPIRTEGIKAWI 493 Query: 481 VLRPGYAPGDALAREIQEFVKVQLAAHEYPRFVQFADSLPMTATGKVLRRELRALG 536 VLRPG+AP D LA+EIQ+FVKVQLAAHEYPR +QFA++LPMTATGKVLRRELR LG Sbjct: 494 VLRPGFAPSDELAKEIQDFVKVQLAAHEYPRHIQFAETLPMTATGKVLRRELRGLG 549 >ref|YP_001203472.1| Acetyl-coenzyme A synthetase [Bradyrhizobium sp. ORS 278] emb|CAL75235.1| Acetyl-coenzyme A synthetase [Bradyrhizobium sp. ORS 278] Length = 535 Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/536 (74%), Positives = 471/536 (87%), Gaps = 1/536 (0%) Query: 1 MLQEAKTYDELYRNFRWDVPARFNMATACCDRHADGTGRLALVYVDEDGGTTRTSFDEVA 60 MLQE YD+LYR+FRWD+PA+FN+A A CDRHADGTG LAL+ V+EDG R SFDE+ Sbjct: 1 MLQETSDYDQLYRDFRWDIPAQFNIAVATCDRHADGTGCLALIVVEEDGAARRVSFDELR 60 Query: 61 DASRRFANVLTADGLVRGDRVAVFLSQSLELPVAHLAAFRAAMISIPLFALFGEDALEFR 120 DAS RFANVL ADGL +GDRVAVFLSQSLELP+ HLAAFRA ++S+PLF LFGEDAL+FR Sbjct: 61 DASCRFANVLKADGLAQGDRVAVFLSQSLELPIVHLAAFRAGLVSVPLFTLFGEDALQFR 120 Query: 121 LSNSAAKAVITDEAGWEKIAKIRDRLPELKSVYIVGEKTPAGTKPFWSAIKSASPEFATV 180 L NS AK V+TD G+ K+ +IRDRLPELK++Y+ + +G +PFWS ++ AS +F TV Sbjct: 121 LQNSGAKVVVTDTTGFAKLQRIRDRLPELKTIYVT-DGEGSGARPFWSTLERASAQFPTV 179 Query: 181 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI 240 TS++DPA+IIYTSGTTGNPKGALHAHRV+LGHLPNVEM H FLP+PGD+MWTPADWAWI Sbjct: 180 ATSSNDPAIIIYTSGTTGNPKGALHAHRVLLGHLPNVEMVHGFLPKPGDVMWTPADWAWI 239 Query: 241 GGLINGLFAFWYHGIPMVGHRARKFEPQAAMQMMAELGIRNVFLPPTALKLMRQANVKNS 300 GGL + LF WYH +P+VG+RARKF PQAAMQ+MA+ +RNVFLPPTALKLMRQA+VK+ Sbjct: 240 GGLFDALFPAWYHAVPVVGYRARKFVPQAAMQLMADYQVRNVFLPPTALKLMRQADVKHD 299 Query: 301 GVRLRSIFTGGESLGGELLDWVRDTFGIDAHEVFGQTECNLVIGSNSNLFPIRPGSMGRA 360 GV+LRSI TGGESLG ELLDWVR TFGIDAHE++GQTECNLV+G+N+ LFPIRPGSMG+A Sbjct: 300 GVKLRSILTGGESLGAELLDWVRATFGIDAHEIYGQTECNLVVGNNAKLFPIRPGSMGKA 359 Query: 361 TPGFDVRIVNEKGEELPRGQRGIIGVRQPCPCTMIEYWRNPEATAKKYAGEFLLTGDLGV 420 TPGF+V IVNEKGEELPRG+RGIIGVRQP PCTMIEYWRNPEAT+KK+AG+ LLTGDLG Sbjct: 360 TPGFEVLIVNEKGEELPRGERGIIGVRQPNPCTMIEYWRNPEATSKKFAGDVLLTGDLGT 419 Query: 421 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHPAVAMSAVVGIPDPIRTESIKAWI 480 QD+DGYFWY SREDDVIT+AGYR+GP+EIE TL+KHPAVA++AVVGIPDP+RTE++KAWI Sbjct: 420 QDQDGYFWYASREDDVITSAGYRIGPAEIEDTLLKHPAVALAAVVGIPDPVRTEAVKAWI 479 Query: 481 VLRPGYAPGDALAREIQEFVKVQLAAHEYPRFVQFADSLPMTATGKVLRRELRALG 536 VLR G+ D L+R+IQ+FVKV+LAAHEYPR V+F DSLPMTATGKVLRRELRA G Sbjct: 480 VLRSGFVANDTLSRKIQDFVKVKLAAHEYPRHVEFTDSLPMTATGKVLRRELRARG 535 >ref|YP_571104.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris BisB5] gb|ABE41203.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris BisB5] Length = 535 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/536 (77%), Positives = 470/536 (87%), Gaps = 1/536 (0%) Query: 1 MLQEAKTYDELYRNFRWDVPARFNMATACCDRHADGTGRLALVYVDEDGGTTRTSFDEVA 60 ML E YD LYR+FRW VPARFN+ATA CDRHA G + AL+YVDE G TR SF E+A Sbjct: 1 MLTETSDYDSLYRDFRWSVPARFNIATAACDRHAIGD-KPALIYVDEAGAVTRMSFAEIA 59 Query: 61 DASRRFANVLTADGLVRGDRVAVFLSQSLELPVAHLAAFRAAMISIPLFALFGEDALEFR 120 ASRRFANVL A GL RGDRVAVFLSQS+ELP+AHLAAFR+ ++S+PLF LFGEDALEFR Sbjct: 60 SASRRFANVLKAAGLARGDRVAVFLSQSIELPIAHLAAFRSGLVSVPLFTLFGEDALEFR 119 Query: 121 LSNSAAKAVITDEAGWEKIAKIRDRLPELKSVYIVGEKTPAGTKPFWSAIKSASPEFATV 180 LSNS A+AVITDE+G K+ +IRDRLPEL+ +Y+ G P+G + FWS + +AS F TV Sbjct: 120 LSNSGARAVITDESGLPKLLRIRDRLPELRQIYVTGGAAPSGVELFWSKLDAASDAFETV 179 Query: 181 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI 240 DTS DDPA+IIYTSGTTGNPKGALHAHRV+LGHLPNVEM H+F PRPGDLMWTPADWAWI Sbjct: 180 DTSCDDPAIIIYTSGTTGNPKGALHAHRVLLGHLPNVEMAHDFFPRPGDLMWTPADWAWI 239 Query: 241 GGLINGLFAFWYHGIPMVGHRARKFEPQAAMQMMAELGIRNVFLPPTALKLMRQANVKNS 300 GGL + LF WYHG+ M+GHRARKFEPQAAMQ+MA+ G+RNVFLPPTALKLMRQA+VK+ Sbjct: 240 GGLFDALFPAWYHGVAMLGHRARKFEPQAAMQLMADHGVRNVFLPPTALKLMRQADVKHP 299 Query: 301 GVRLRSIFTGGESLGGELLDWVRDTFGIDAHEVFGQTECNLVIGSNSNLFPIRPGSMGRA 360 GV+LRSIFTGGESLGGELL WVR TFG+DAHE++GQTECNLV+G+N+ LFPIRPGSMG+A Sbjct: 300 GVKLRSIFTGGESLGGELLAWVRATFGVDAHEIYGQTECNLVVGNNARLFPIRPGSMGKA 359 Query: 361 TPGFDVRIVNEKGEELPRGQRGIIGVRQPCPCTMIEYWRNPEATAKKYAGEFLLTGDLGV 420 TPGFDVRIV+E G ELP G+RGIIGVRQP PCTM+EYW+NPEATAKK+AG FLLTGDL Sbjct: 360 TPGFDVRIVDEDGRELPCGERGIIGVRQPNPCTMLEYWKNPEATAKKFAGGFLLTGDLAR 419 Query: 421 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHPAVAMSAVVGIPDPIRTESIKAWI 480 QD DGYFWY SREDDVIT+AGYR+GPSEIEHTL+KHPAVA +AVVG+PDPIRTE+IKAWI Sbjct: 420 QDGDGYFWYDSREDDVITSAGYRIGPSEIEHTLLKHPAVAFAAVVGVPDPIRTEAIKAWI 479 Query: 481 VLRPGYAPGDALAREIQEFVKVQLAAHEYPRFVQFADSLPMTATGKVLRRELRALG 536 VLRPG+A GDALAREIQ FVKVQLAAHEYPR V+F ++LPMTATGKVLRRELRA G Sbjct: 480 VLRPGFAKGDALAREIQNFVKVQLAAHEYPRHVEFTETLPMTATGKVLRRELRAKG 535 >ref|YP_001242585.1| Acetyl-coenzyme A synthetase [Bradyrhizobium sp. BTAi1] gb|ABQ38679.1| Acetyl-coenzyme A synthetase [Bradyrhizobium sp. BTAi1] Length = 535 Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/536 (75%), Positives = 462/536 (86%), Gaps = 1/536 (0%) Query: 1 MLQEAKTYDELYRNFRWDVPARFNMATACCDRHADGTGRLALVYVDEDGGTTRTSFDEVA 60 ML+E YD LY +FRW++PA+FN+A A CDRHADG+GRLAL+ V+EDG R SFDE+ Sbjct: 1 MLKETSDYDLLYSDFRWEIPAQFNIAVATCDRHADGSGRLALIVVEEDGTARRVSFDELR 60 Query: 61 DASRRFANVLTADGLVRGDRVAVFLSQSLELPVAHLAAFRAAMISIPLFALFGEDALEFR 120 D S RFANVL ADGL +GDRVAVFLSQSLELP+ HLAAFRA ++S+PLF LFGEDAL+FR Sbjct: 61 DFSCRFANVLKADGLAQGDRVAVFLSQSLELPIVHLAAFRAGLVSVPLFTLFGEDALQFR 120 Query: 121 LSNSAAKAVITDEAGWEKIAKIRDRLPELKSVYIVGEKTPAGTKPFWSAIKSASPEFATV 180 L NS AK V+TD G K+A IR LPELK+VY++ + AG +PFW ++ AS F TV Sbjct: 121 LQNSGAKVVVTDAVGLAKLATIRHHLPELKTVYVI-DGDGAGARPFWPTLERASDRFPTV 179 Query: 181 DTSADDPALIIYTSGTTGNPKGALHAHRVVLGHLPNVEMCHNFLPRPGDLMWTPADWAWI 240 TS+DDPA+IIYTSGTTGNPKGALHAHRV+LGHLPNVEM H FLP+PGD+MWTPADWAWI Sbjct: 180 ATSSDDPAIIIYTSGTTGNPKGALHAHRVLLGHLPNVEMVHGFLPKPGDVMWTPADWAWI 239 Query: 241 GGLINGLFAFWYHGIPMVGHRARKFEPQAAMQMMAELGIRNVFLPPTALKLMRQANVKNS 300 GGL + LF WYH +P+VG+RARKF PQAAMQ+MA+ IRNVFLPPTALKLMRQANVK+ Sbjct: 240 GGLFDALFPAWYHAVPVVGYRARKFVPQAAMQLMADYAIRNVFLPPTALKLMRQANVKHD 299 Query: 301 GVRLRSIFTGGESLGGELLDWVRDTFGIDAHEVFGQTECNLVIGSNSNLFPIRPGSMGRA 360 GV+LRSI TGGESLG ELLDWVR TFGIDAHE++GQTECNLV+G+N+ LFPIRPGSMG+A Sbjct: 300 GVKLRSILTGGESLGAELLDWVRTTFGIDAHEIYGQTECNLVVGNNAKLFPIRPGSMGKA 359 Query: 361 TPGFDVRIVNEKGEELPRGQRGIIGVRQPCPCTMIEYWRNPEATAKKYAGEFLLTGDLGV 420 TPGFDV IVN+KGEELPRG RGIIGVRQP PCTMIEYWRNPEAT KK+AG+ LLTGDLG Sbjct: 360 TPGFDVLIVNDKGEELPRGTRGIIGVRQPNPCTMIEYWRNPEATRKKFAGDVLLTGDLGA 419 Query: 421 QDEDGYFWYVSREDDVITTAGYRVGPSEIEHTLMKHPAVAMSAVVGIPDPIRTESIKAWI 480 QD DGYFWY SREDDVIT+AGYR+GP+EIE TL+KHPAVA++AVVGIPDP+RTE++KAWI Sbjct: 420 QDADGYFWYASREDDVITSAGYRIGPAEIEDTLLKHPAVALAAVVGIPDPVRTEAVKAWI 479 Query: 481 VLRPGYAPGDALAREIQEFVKVQLAAHEYPRFVQFADSLPMTATGKVLRRELRALG 536 VLRPG D L+REIQ+FVKV+LAAHEYPR V+F DSLPMTATGKVLRRELRA G Sbjct: 480 VLRPGVVANDTLSREIQDFVKVKLAAHEYPRHVEFTDSLPMTATGKVLRRELRARG 535