BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0255.0021.p         (93 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_779916.1| GatB/Yqey domain-containing protein [Rhodopseud...   174   3e-42
ref|ZP_07025200.1| hypothetical protein AfiDRAFT_0328 [Afipia sp...   169   1e-40
ref|YP_002288134.1| GatB/Yqey domain protein [Oligotropha carbox...   169   1e-40
ref|NP_946629.1| hypothetical protein RPA1278 [Rhodopseudomonas ...   166   9e-40
ref|YP_001990487.1| GatB/YqeY [Rhodopseudomonas palustris TIE-1]...   166   1e-39

>ref|YP_779916.1| GatB/Yqey domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gb|ABJ04936.1| GatB/Yqey domain protein [Rhodopseudomonas palustris BisA53]
          Length = 151

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 88/93 (94%), Positives = 92/93 (98%)

Query: 1   MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMSDDDVKAAISAVIAETGAAGI 60
           MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLP+QMSDD+VKAAI+A+I ETGAAGI
Sbjct: 59  MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPQQMSDDEVKAAITALITETGAAGI 118

Query: 61  KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 93
           KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG
Sbjct: 119 KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 151


>ref|ZP_07025200.1| hypothetical protein AfiDRAFT_0328 [Afipia sp. 1NLS2]
 gb|EFI52342.1| hypothetical protein AfiDRAFT_0328 [Afipia sp. 1NLS2]
          Length = 151

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/93 (92%), Positives = 91/93 (97%)

Query: 1   MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMSDDDVKAAISAVIAETGAAGI 60
           MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMS+D+VKAAI+A I +TGAAG+
Sbjct: 59  MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMSEDEVKAAIAATIKDTGAAGM 118

Query: 61  KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 93
           KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG
Sbjct: 119 KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 151


>ref|YP_002288134.1| GatB/Yqey domain protein [Oligotropha carboxidovorans OM5]
 ref|YP_004633764.1| GatB/Yqey domain-containing protein [Oligotropha carboxidovorans
           OM5]
 gb|ACI92269.1| GatB/Yqey domain protein [Oligotropha carboxidovorans OM5]
 gb|AEI03946.1| GatB/Yqey domain protein [Oligotropha carboxidovorans OM4]
 gb|AEI07523.1| GatB/Yqey domain protein [Oligotropha carboxidovorans OM5]
          Length = 151

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/93 (89%), Positives = 89/93 (95%)

Query: 1   MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMSDDDVKAAISAVIAETGAAGI 60
           MIKQRQESV LYDKGGR ELAAQEREEI VISAYLPKQMSDD+VKAAI+A++ ETGA+G+
Sbjct: 59  MIKQRQESVALYDKGGRTELAAQEREEITVISAYLPKQMSDDEVKAAITAIVTETGASGM 118

Query: 61  KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 93
           KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG
Sbjct: 119 KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 151


>ref|NP_946629.1| hypothetical protein RPA1278 [Rhodopseudomonas palustris CGA009]
 emb|CAE26721.1| GatB/Yqey [Rhodopseudomonas palustris CGA009]
          Length = 151

 Score =  166 bits (421), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 84/93 (90%), Positives = 89/93 (95%)

Query: 1   MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMSDDDVKAAISAVIAETGAAGI 60
           MIKQRQESVELYDKGGRAELA QER EIAVI AYLP+QMSDD+VKAAI+A I+ETGAAGI
Sbjct: 59  MIKQRQESVELYDKGGRAELADQERAEIAVIQAYLPQQMSDDEVKAAIAATISETGAAGI 118

Query: 61  KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 93
           KDMGKVIGALKAKYAGQMDFGKASG+VKAALTG
Sbjct: 119 KDMGKVIGALKAKYAGQMDFGKASGMVKAALTG 151


>ref|YP_001990487.1| GatB/YqeY [Rhodopseudomonas palustris TIE-1]
 gb|ACF00012.1| GatB/YqeY [Rhodopseudomonas palustris TIE-1]
          Length = 151

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/93 (90%), Positives = 88/93 (94%)

Query: 1   MIKQRQESVELYDKGGRAELAAQEREEIAVISAYLPKQMSDDDVKAAISAVIAETGAAGI 60
           MIKQRQESVELYDKGGRAELA QER EIAVI AYLP+QMSDD+VKAAI+A I ETGAAGI
Sbjct: 59  MIKQRQESVELYDKGGRAELADQERAEIAVIQAYLPQQMSDDEVKAAIAATITETGAAGI 118

Query: 61  KDMGKVIGALKAKYAGQMDFGKASGLVKAALTG 93
           KDMGKVIGALKAKYAGQMDFGKASG+VKAALTG
Sbjct: 119 KDMGKVIGALKAKYAGQMDFGKASGMVKAALTG 151