BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0255.0020.p         (56 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004110455.1| hypothetical protein Rpdx1_4168 [Rhodopseudo...    93   2e-17
ref|NP_946629.1| hypothetical protein RPA1278 [Rhodopseudomonas ...    90   1e-16
ref|YP_001990487.1| GatB/YqeY [Rhodopseudomonas palustris TIE-1]...    90   1e-16
ref|YP_578098.1| hypothetical protein Nham_2870 [Nitrobacter ham...    88   4e-16
ref|ZP_01046935.1| hypothetical protein NB311A_14115 [Nitrobacte...    88   4e-16

>ref|YP_004110455.1| hypothetical protein Rpdx1_4168 [Rhodopseudomonas palustris DX-1]
 gb|ADU45722.1| hypothetical protein Rpdx1_4168 [Rhodopseudomonas palustris DX-1]
          Length = 151

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/45 (97%), Positives = 45/45 (100%)

Query: 1  MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADIDARGQGKP 45
          MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADI+ARGQGKP
Sbjct: 1  MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADIEARGQGKP 45


>ref|NP_946629.1| hypothetical protein RPA1278 [Rhodopseudomonas palustris CGA009]
 emb|CAE26721.1| GatB/Yqey [Rhodopseudomonas palustris CGA009]
          Length = 151

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/45 (95%), Positives = 44/45 (97%)

Query: 1  MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADIDARGQGKP 45
          MLRDDIN AVKEAMKAKDERKLSTLRMVNSTIKNADI+ARGQGKP
Sbjct: 1  MLRDDINNAVKEAMKAKDERKLSTLRMVNSTIKNADIEARGQGKP 45


>ref|YP_001990487.1| GatB/YqeY [Rhodopseudomonas palustris TIE-1]
 gb|ACF00012.1| GatB/YqeY [Rhodopseudomonas palustris TIE-1]
          Length = 151

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/45 (95%), Positives = 44/45 (97%)

Query: 1  MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADIDARGQGKP 45
          MLRDDIN AVKEAMKAKDERKLSTLRMVNSTIKNADI+ARGQGKP
Sbjct: 1  MLRDDINNAVKEAMKAKDERKLSTLRMVNSTIKNADIEARGQGKP 45


>ref|YP_578098.1| hypothetical protein Nham_2870 [Nitrobacter hamburgensis X14]
 gb|ABE63638.1| GatB/Yqey [Nitrobacter hamburgensis X14]
          Length = 151

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 44/45 (97%)

Query: 1  MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADIDARGQGKP 45
          MLRDDIN AVKEAMKA+DERKLSTLRM+NSTIKNADI+ARGQGKP
Sbjct: 1  MLRDDINNAVKEAMKARDERKLSTLRMINSTIKNADIEARGQGKP 45


>ref|ZP_01046935.1| hypothetical protein NB311A_14115 [Nitrobacter sp. Nb-311A]
 gb|EAQ35037.1| hypothetical protein NB311A_14115 [Nitrobacter sp. Nb-311A]
          Length = 150

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/45 (93%), Positives = 43/45 (95%)

Query: 1  MLRDDINTAVKEAMKAKDERKLSTLRMVNSTIKNADIDARGQGKP 45
          MLRDDIN AVKEAMKAKDERKLSTLRMVNSTIKNADI+ARG GKP
Sbjct: 1  MLRDDINNAVKEAMKAKDERKLSTLRMVNSTIKNADIEARGHGKP 45