BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0255.0016.p (156 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240848.1| hypothetical protein BBta_4922 [Bradyrhizobi... 92 4e-17 ref|YP_004110894.1| hypothetical protein Rpdx1_4612 [Rhodopseudo... 89 2e-16 ref|YP_661326.1| hypothetical protein Patl_1751 [Pseudoalteromon... 68 4e-10 ref|YP_001675755.1| hypothetical protein Shal_3553 [Shewanella h... 65 5e-09 ref|YP_004783295.1| hypothetical protein Acife_0771 [Acidithioba... 55 3e-06 >ref|YP_001240848.1| hypothetical protein BBta_4922 [Bradyrhizobium sp. BTAi1] gb|ABQ36942.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 167 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/144 (44%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 9 IWRSLAAGLCGNAAHSGVMYLKRWMGWLPTFHPYRDLQHGLSEWLGGAVHPSVP-WAMSF 67 I SL A CG AH G+M LK + LP F P L L H P W +S Sbjct: 18 IGSSLVASGCGTLAHMGLMELKTALHILPQFDPSSALLETLPPLFANVTHVQAPVWLLSQ 77 Query: 68 VNGTLILGILFRVSYHLLPGHSGIAKGFVFGILGWIAMGLLYFPVLGRGLFASQLGLGSL 127 +NG ++G+LF +H LPG SG+AKGF+ G+ GW+ +G++ FP +G G F LGLG+ Sbjct: 78 LNGAFLIGLLFGYVFHRLPGRSGLAKGFLLGLAGWLLLGIVLFPAIGLGPFGISLGLGAG 137 Query: 128 PAGFSLVMVLAYSVFLGAAYSALH 151 P FSL MV AYS+ LG Y+AL Sbjct: 138 PGLFSLAMVEAYSLVLGVVYAALQ 161 >ref|YP_004110894.1| hypothetical protein Rpdx1_4612 [Rhodopseudomonas palustris DX-1] gb|ADU46161.1| hypothetical protein Rpdx1_4612 [Rhodopseudomonas palustris DX-1] Length = 156 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 80/140 (57%) Query: 12 SLAAGLCGNAAHSGVMYLKRWMGWLPTFHPYRDLQHGLSEWLGGAVHPSVPWAMSFVNGT 71 ++ +GLCG AA G+ + + +G LP+F PY DLQ L+E LG + ++ A+ ++G Sbjct: 12 AVVSGLCGMAAQWGLRWARGALGILPSFQPYEDLQRQLAEALGASPPAALQAALPLLSGA 71 Query: 72 LILGILFRVSYHLLPGHSGIAKGFVFGILGWIAMGLLYFPVLGRGLFASQLGLGSLPAGF 131 LI +F +Y +PG S + KGF W+ G + P++G+G+FAS++ G+ PA Sbjct: 72 LIWSSIFAWAYRWIPGRSALTKGFAVTGFAWLLTGFVLLPLVGKGVFASRVDAGAWPAVM 131 Query: 132 SLVMVLAYSVFLGAAYSALH 151 L M+ AY + L Y L Sbjct: 132 MLAMLSAYCLTLSVVYGRLR 151 >ref|YP_661326.1| hypothetical protein Patl_1751 [Pseudoalteromonas atlantica T6c] gb|ABG40272.1| hypothetical protein Patl_1751 [Pseudoalteromonas atlantica T6c] Length = 167 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 2/140 (1%) Query: 11 RSLAAGLCGNAAHSGVMYLKRWMGWLPTFHPYRDLQHGLSEWLGGAVHPSVPWAMSFVNG 70 + + AG G +G+M +K+ MG +P P + +E +G + + W M FV G Sbjct: 25 KGIIAGFVGTLVLTGLMMVKKNMGVMPELDPIHMMSTMAAEKMGTQISLTTGWIMHFVLG 84 Query: 71 TLILGILFRVSYHLLPGHSGIAKGFVFGILGWIAMGLLYFPVLGRGLFASQLGLGSLPAG 130 ++ G F V +LPG S +AKG FGIL W+ M + P+ G GLF L +G + Sbjct: 85 SVAWGGAFAVFNGILPGGSQVAKGMTFGILAWLLMMIGPMPMSGAGLFG--LSMGIMAPV 142 Query: 131 FSLVMVLAYSVFLGAAYSAL 150 +L++ L + +G ++ L Sbjct: 143 MTLILHLVFGAAMGFTFAKL 162 >ref|YP_001675755.1| hypothetical protein Shal_3553 [Shewanella halifaxensis HAW-EB4] gb|ABZ78096.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length = 159 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 2/144 (1%) Query: 7 DKIWRSLAAGLCGNAAHSGVMYLKRWMGWLPTFHPYRDLQHGLSEWLGGAVHPSVPWAMS 66 +K S+ AG S +M +K+ MG +P +P L + +G V W Sbjct: 14 NKYISSMIAGFVATIVLSLLMLMKQAMGLMPELNPIMMLSNMAHMKMGLPESMVVGWMAH 73 Query: 67 FVNGTLILGILFRVSYHLLPGHSGIAKGFVFGILGWIAMGLLYFPVLGRGLFASQLGLGS 126 F+ GT + G+ F + + +LPG I+KG F +L W M +L P+ G GLF LG+ Sbjct: 74 FMIGTFVWGLTFSLLFKVLPGSCAISKGVAFSVLAWFLMMILPMPMSGAGLFGVNLGM-- 131 Query: 127 LPAGFSLVMVLAYSVFLGAAYSAL 150 + +L M L + V LG Y L Sbjct: 132 MAPVMALGMHLVWGVVLGYVYGRL 155 >ref|YP_004783295.1| hypothetical protein Acife_0771 [Acidithiobacillus ferrivorans SS3] gb|AEM46969.1| hypothetical protein Acife_0771 [Acidithiobacillus ferrivorans SS3] Length = 159 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 2/153 (1%) Query: 4 TVGDKIWRSLAAGLCGNAAHSGVMYLKRWMGWLPTFHPYRDLQHGLSEWLGGAVHPSVPW 63 T + + + + AG A S +M K MG +P + L ++G + W Sbjct: 3 TQCNTLGKGMIAGFVATIALSLLMIAKSVMGLMPDLNVIAMLTSMAHTYMGLPQIMLIGW 62 Query: 64 AMSFVNGTLILGILFRVSYHLLPGHSGIAKGFVFGILGWIAMGLLYFPVLGRGLFASQLG 123 + F GT+ GILF + LPG + I KG +FG + W M ++ P+ G G+F + G Sbjct: 63 MLHFAIGTIAWGILFVLLAPHLPGTNPIVKGLIFGTIAWFTMMIIVMPMAGAGVFGWKFG 122 Query: 124 LGSLPAGFSLVMVLAYSVFLGAAYSALHVSDLR 156 + + A + L +V Y LG Y L V Sbjct: 123 IMAPVATWMLHLV--YGAVLGYVYGRLTVRSCN 153